KEGG   Rana temporaria (common frog): 120937404
Entry
120937404         CDS       T07929                                 
Symbol
NUP43
Name
(RefSeq) nucleoporin Nup43
  KO
K14305  nuclear pore complex protein Nup43
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120937404 (NUP43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtem03019]
    120937404 (NUP43)
   03036 Chromosome and associated proteins [BR:rtem03036]
    120937404 (NUP43)
Messenger RNA biogenesis [BR:rtem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120937404 (NUP43)
Chromosome and associated proteins [BR:rtem03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    120937404 (NUP43)
SSDB
Motif
Pfam: WDR55 WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_EIPR1 Beta-prop_EML Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_WDR75_1st WD_LRWD1 Beta-prop_IFT140_1st Beta-prop_BBS7 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 120937404
NCBI-ProteinID: XP_040206536
LinkDB
Position
4:complement(310693278..310724720)
AA seq 375 aa
MENVKAKFVSQKISKTRWRPEPASSLQQPDLFAAGSWDNEENKVSIWSTGEFGTITMDED
YETDIKLLCEIRHKGDVTDLQFLDQERIVTASSTGKVTIFRHHQTNETLSEKQKWEHAHQ
NVNSNGTGAPCTGIVCNSPEIVSVGEDGRINVFRADSKDIVRTIDDADSSTMHAVTFLRT
TEILTVNSIGQLKMWDLRQQGNDPTQIFSVANERVPLHCLDRHPSQQHVVATGGQDGMLC
IWDVRQSKIPVSLLSAHNAEMWEVHFHPSKPDHIFTCSEDGSLWHWDASADAADRPSFLL
GGRGTSHLSRSTLGQSVSQSLMTPWLSSDPTKGRLEIINVMPSYTLSVNSLDVLGEYLVC
GTDSESIYVSKNLFT
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggagaacgtcaaagccaagttcgtgtcacagaagatcagtaagacccgctggcgcccg
gagccggcctcctctctgcagcagccggacctgttcgctgcgggctcctgggacaatgag
gaaaacaaagtgtccatatggtccactggagagtttggaacaattactatggatgaagat
tacgaaaccgatataaaattgttgtgtgagatcagacacaaaggcgatgtaacagacctg
cagtttttagatcaagaaagaattgtgacggcatcatcgactggaaaagtaacaatcttt
cgtcaccatcagacgaatgagacattatcagaaaaacagaagtgggagcatgctcatcaa
aatgttaactcaaatggcacaggagcaccgtgcactggtattgtttgcaacagtccagaa
attgtctctgttggagaagatggccgaataaatgttttcagagctgacagcaaagacata
gtaaggacaatagatgatgcagacagcagtacaatgcatgcagtaacatttcttcgtacc
actgagattttgactgtcaattccattggacagctgaagatgtgggaccttagacaacag
ggcaatgaccctacacaaatattctctgtagctaatgagagggtccctttacactgcttg
gacaggcatccaagtcaacagcatgttgtagcaacaggcggtcaagatggaatgctatgt
atttgggatgttagacagagcaaaattccagtatccttgctcagcgctcacaatgcagaa
atgtgggaggttcattttcacccttcaaaaccggatcatatattcacatgttctgaagat
ggttccctttggcattgggatgcatcagctgacgctgcagaccgaccttcttttcttctt
ggaggaagaggaacttcacatttgtcccgtagcactttaggacagtctgttagccagtca
ttaatgacaccttggctcagcagtgatcccacaaaaggacgtctagaaattatcaatgta
atgccctcttacacactatctgtgaacagcctggatgttttaggcgaataccttgtatgt
ggcactgattcagagtccatctatgtttccaaaaaccttttcacatag

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