Rana temporaria (common frog): 120937404
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Entry
120937404 CDS
T07929
Symbol
NUP43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120937404 (NUP43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120937404 (NUP43)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120937404 (NUP43)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120937404 (NUP43)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120937404 (NUP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_BBS7
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
120937404
NCBI-ProteinID:
XP_040206536
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All DBs
Position
4:complement(310693278..310724720)
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AA seq
375 aa
AA seq
DB search
MENVKAKFVSQKISKTRWRPEPASSLQQPDLFAAGSWDNEENKVSIWSTGEFGTITMDED
YETDIKLLCEIRHKGDVTDLQFLDQERIVTASSTGKVTIFRHHQTNETLSEKQKWEHAHQ
NVNSNGTGAPCTGIVCNSPEIVSVGEDGRINVFRADSKDIVRTIDDADSSTMHAVTFLRT
TEILTVNSIGQLKMWDLRQQGNDPTQIFSVANERVPLHCLDRHPSQQHVVATGGQDGMLC
IWDVRQSKIPVSLLSAHNAEMWEVHFHPSKPDHIFTCSEDGSLWHWDASADAADRPSFLL
GGRGTSHLSRSTLGQSVSQSLMTPWLSSDPTKGRLEIINVMPSYTLSVNSLDVLGEYLVC
GTDSESIYVSKNLFT
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtcaaagccaagttcgtgtcacagaagatcagtaagacccgctggcgcccg
gagccggcctcctctctgcagcagccggacctgttcgctgcgggctcctgggacaatgag
gaaaacaaagtgtccatatggtccactggagagtttggaacaattactatggatgaagat
tacgaaaccgatataaaattgttgtgtgagatcagacacaaaggcgatgtaacagacctg
cagtttttagatcaagaaagaattgtgacggcatcatcgactggaaaagtaacaatcttt
cgtcaccatcagacgaatgagacattatcagaaaaacagaagtgggagcatgctcatcaa
aatgttaactcaaatggcacaggagcaccgtgcactggtattgtttgcaacagtccagaa
attgtctctgttggagaagatggccgaataaatgttttcagagctgacagcaaagacata
gtaaggacaatagatgatgcagacagcagtacaatgcatgcagtaacatttcttcgtacc
actgagattttgactgtcaattccattggacagctgaagatgtgggaccttagacaacag
ggcaatgaccctacacaaatattctctgtagctaatgagagggtccctttacactgcttg
gacaggcatccaagtcaacagcatgttgtagcaacaggcggtcaagatggaatgctatgt
atttgggatgttagacagagcaaaattccagtatccttgctcagcgctcacaatgcagaa
atgtgggaggttcattttcacccttcaaaaccggatcatatattcacatgttctgaagat
ggttccctttggcattgggatgcatcagctgacgctgcagaccgaccttcttttcttctt
ggaggaagaggaacttcacatttgtcccgtagcactttaggacagtctgttagccagtca
ttaatgacaccttggctcagcagtgatcccacaaaaggacgtctagaaattatcaatgta
atgccctcttacacactatctgtgaacagcctggatgttttaggcgaataccttgtatgt
ggcactgattcagagtccatctatgtttccaaaaaccttttcacatag
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integrated database retrieval system