Rana temporaria (common frog): 120937497
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Entry
120937497 CDS
T07929
Symbol
TTC28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtem03037
]
120937497 (TTC28)
Cilium and associated proteins [BR:
rtem03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
120937497 (TTC28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_14
TPR_16
RPN7
Rapsyn_N
TPR_NPHP3
TPR_6
TPR_17
TPR_9
TPR_19
ANAPC5
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
120937497
NCBI-ProteinID:
XP_040206700
LinkDB
All DBs
Position
1:221133844..221769998
Genome browser
AA seq
2346 aa
AA seq
DB search
MMKWQPRKKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLLGMVEAAMKSPMRES
LEPTYQQLQKMKLDKSPFVVVSVIGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFS
ALSSAYWSLGNTEKSTGYMQQDLDVAKTLGDQTGECRAYGNLGSAFFSKGNFREALTNHR
HQLVLAMKLKEREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELG
NMGAVYIAMGDFENAVHCHEQHLKIAKDLGNKREEARAYSNLGSAYHYRRNFDKAMSYHN
HVLELAQELTEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAESLKDRAAEGRASS
NLGIIHQMKGDFDTALKLHKAHLSIAQELNDYAAQGRAYGNMGNAYNALGMYDQAVKYHR
QELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALG
NLGNFHCSRGEYMQAVPFYEQYLRISPELQDMEGEGKVCHNLGYAYYCLGNYQDAVKYYE
QDLALAKDLHDKVSQAKAYCNLGLAFKALMNYNKAEECQKYLLSLAQSLNNSQAKFRALG
NLGDIFVAKKDVNGAIKFYEQQLGLAHQVKDRRLEASAYAALGSAYRMIQKYDKALGYHT
QELEVFQELNELPGECRAHGHLAAVYMSLEKYTMAFKCYEEQLELGQKLKDPAIEAQVYG
NMGITKMNMNVMEEAIGYFEQQLAMLQQLSGNDSILDRGRAYGNLGDCYDALGDYEEAIK
YYEQYLSVAQSLNRLPDQSKAYRGLGNGHRSMGNLQQSLVCFEKRLVVAHELGETSNKAQ
AYGELGHLHSQLGNYEQAISCLERQLNIAREMKDQILESDAACGLGGVYQQMGEFDTALQ
YHQLDLQIAEETNNPSCQARAYGNLGLTYESLGNFERAVVYQEQHLSIAAEMNDLVAKTV
AYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLSRREDEAKIRHRLGLSLWASGNLEEAQH
QLYRASALFETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLISLGHHDEALAVAERGRTR
AFADLLVERQTGQQESDPYSPVTIDQILETVNSQRGLVLYYSLAAGYLYSWLLAPGSGIL
KFHECYLGDSSLENTSDFTDSGSMSFQGSNSSVLEQYIANVRETLGVDSYYTRTCASSET
ESEAGDYMDQQYDDLNNKMNLVTDPTGFLRMVNRNNTFNRSCSSMTSLFSNTMSPVKDNT
SSLPRKQSCLNKPPLRALYDLLLAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLK
GSSSNEYLYERFSLIAVPSIRSLNINSKSHLRKNAPLYSSSTSMAAVIGNPKLPPSVMDR
WLWGPMPSAEEEAYMVSELLGCQPLVGSLATKDKVMSALTQAECVHFATHISWKLAALIL
TPNSENSSGTNKSTFGNTYTIPESLQMQDDASDVESISDCPPLQEFLLTAADVLDLRLPV
KLVVLGSYQESSNKVTADGIIGLTRAFLAAGAQCVLVSLWPVPVAASKMFVHAFYSALLN
GMKASASLSEAMKTVQSSKQYSHPSNWAGYMLIGSDVKLNSPSSLIGQALSEILQNPDRA
RDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVQGWQSLLTAVGFRLDPPASG
LPAAVFFPTSDPGDRLQQCSTTIQSLLGLPHAALQALCKLITASETGEQLINRAVKNMVG
VLHQVLVQLQTDKDHDFSTVPIQVCISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTG
KQANKRTMQFALQSLLALFDSTELPKRLSLDSSSSLESLASSQSVSNPMPPGYPGHPFSP
ICPDGMASDAISVYSLSSIASSMSFVSKPDCLPEGEHKLRHDHDRPKNLHSLRTSARGQS
SPQTQMSLGKEEQEEYEGFSIISNEPLLSYTESLDPNLRQGTIQETIQVSVNSKGSISTP
NSPVKLSLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEENNPKLNPEELAQKI
LEETQSHLIAVERLQRSGSLNKTSHSPDGATTPNGSSLFRSSETSAFSRPVQKGMPSPVN
VKPKPPTRSSSLQKVSSGYNSPANSETSLKDAASPHSNQPSPSSDSPYFKLKYPSSPYSS
HISRSPRNISPSSGHQSPAGSTSSPALSYSSAGSARSSPADAPDLDKLKLAAIDEKVKAI
HNLKMFWTSGPQQTSGPIKILRGTPGTMTSKKDVLSLLNLSPRHNKKEAAVDNLELKELS
ARKKQVDAAQPNPPNGHKHTENINVANITQSTPSINMPASLRSLKLSSGNGYKFLSPGRF
FPSSKC
NT seq
7041 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatggcagccccggaagaaggcatacttcagacagggtgttgcccttcagtat
cttggtcgccatgcagatgccctggctgcgtttgcatccggattggctcaggatcccaag
agtttacagctgctgctaggcatggtggaagcagcaatgaaatcccctatgagagaatct
ttggaacctacttaccaacaacttcagaagatgaaactggacaagagcccttttgtggta
gtgtcagtgattggtcaagaacttttaactgcaggacatcatggtgcttcagtggttgtg
ttagaagctgcactgaaaattgggacttgcagtctaaagctgaggggttctgtgttttct
gccctaagcagtgcttactggtctcttggaaacacagagaagagcacgggatatatgcaa
caggacttggacgtagcaaagactctaggtgaccagacaggagagtgccgtgcctatggg
aatctaggatctgcattcttttccaaaggaaactttcgggaggcacttactaaccacagg
catcagttagttctcgccatgaagctaaaggagagagaggcagcatcatctgctttaagc
agtttgggtcatgtctacacagcaattggtgactaccccaatgcactggcaagtcacaag
cagtgtgttctcctagctaagcaatccaaagatgaactgtctgaagcacgagagctggga
aacatgggagcggtctacattgcaatgggagactttgaaaacgcagtccattgtcatgaa
caacatttaaaaatagcaaaggaccttggcaacaaacgggaagaagcccgggcatatagc
aaccttggcagtgcctatcactatagaagaaactttgacaaagcaatgtcataccataac
catgtcttggaacttgcacaagaattaacggaaaaggctattgagatgcgagcctatgca
ggcttaggccacgctgcacgctgtatgcaagacttagagagagctaaacaatatcatgaa
caacagctaggcattgcagaaagtctcaaagaccgggcggctgagggtagagcatcttca
aatttaggaataattcatcagatgaaaggagactttgatactgcactaaaattacacaag
gctcacctttcgattgcccaggaattaaacgattatgcagctcaaggcagggcttatggt
aacatggggaatgcctataatgcacttgggatgtatgaccaggctgttaagtatcatcgg
caagaacttcagatatcgatggaggtcaatgacagagcttctcaagcctctacacacggg
aatttagctgttgcatatcaggctttaggtgctcatgatagagctttacaacactaccaa
aaccatctgaacattgctcgggaactacgggatattcaaagtgaagctcgagctctaggc
aaccttggaaatttccactgctctcgaggtgaatacatgcaagcagtacctttttatgaa
cagtacttgagaatatcacctgaactgcaagacatggagggggagggtaaagtgtgtcac
aatcttggctatgcttattattgcctaggaaattaccaggatgctgtaaaatactatgaa
caggatttggcattggcaaaggatctccatgacaaagtaagccaagctaaggcatactgt
aacttgggcctggcatttaaggcactaatgaactataataaagctgaagaatgccagaaa
taccttttgtcattggcacagtctttgaataattctcaagcaaagttccgtgctcttggg
aaccttggcgatatttttgttgctaagaaagatgtaaatggtgcaataaaattttacgaa
cagcaactaggtttagctcatcaagtcaaggacaggcggctagaggctagcgcttatgct
gctttaggtagtgcttacagaatgatacaaaaatatgacaaagcattgggatatcataca
caggaacttgaggtcttccaagaattaaatgaattgccaggagaatgcagagctcatggt
caccttgctgctgtatatatgtctcttgagaagtacactatggccttcaaatgctatgag
gaacagcttgagctggggcaaaagcttaaagaccctgcaatagaagctcaggtgtatggg
aatatgggcatcactaaaatgaacatgaatgtcatggaggaggctattggttattttgaa
cagcagctagccatgctacagcagttgagtggaaatgactctatccttgacagaggtcgt
gcatatggaaacttgggagattgttatgatgcccttggagactatgaagaagcaataaaa
tattatgagcagtatttatctgtggctcaaagcttgaaccgccttccagatcagtccaaa
gcatacaggggacttggaaatggacacaggtccatgggaaatttacaacagtctctcgta
tgctttgaaaaaagacttgtggtcgctcatgaacttggagagacatcaaacaaagcccag
gcatacggagaacttggacatttgcatagtcagctaggaaactatgagcaagcaatatcc
tgcctagaacgtcaactaaacattgccagagaaatgaaagaccagatactggagagtgat
gcagcctgtggtctgggtggagtctatcaacaaatgggagagtttgatactgccttacag
taccatcaactggacttacaaatagctgaagaaaccaacaatccatcttgccaagctcga
gcctatggaaatctgggacttacttatgaatctctgggtaactttgaaagagccgtagtc
tatcaggaacagcaccttagcattgcagcagaaatgaatgacttggtagcaaagacagtg
gcctatagtagcttaggaagaactcatcatgctttacagaattattcccaagcagtaatg
tacttacaagaaggtttgaggttagcagaacagttgtcccgtagagaggatgaagccaaa
attagacaccgtcttggactctctctttgggctagtggaaatttggaagaagctcaacac
cagctttaccgagcttcagcgttatttgaaacaataagacacgaagcccagctcagcact
gattataagctctctctcttcgatctacaaacctcgtcataccaggctctgcagcgtgta
ctcatcagtcttggacatcatgatgaagctttggcagttgcagagaggggaagaactcga
gcttttgcagaccttctagttgagcgacaaactgggcagcaagaatctgacccttactcc
cctgtgactattgaccaaatcctggagactgttaatagccagcgaggattggtgctctac
tactcactagctgctggttatctttacagttggttactggcacctggttcaggaattctg
aagtttcatgaatgctatctgggagactcatcactggaaaataccagcgattttactgat
tctggaagtatgagttttcaaggatcgaatagttcagttctagagcaatacatagcaaat
gtacgtgaaaccttaggagtggactcttactacacaaggacttgtgcaagcagtgaaacc
gagagtgaggctggagattacatggaccagcaatacgatgaccttaacaataaaatgaat
ttggtgacagatccaactggattcctgaggatggtcaacagaaacaacacattcaacaga
agttgctcaagtatgacaagcctgtttagtaacactatgtctccggtaaaagacaacacc
tcatccttgccccgaaaacaaagctgtctcaacaaaccacctctgcgcgccctgtatgat
ctgctgctggcaccaatggaaggggggttaatgcattcgagtggtccagtggggagacat
cggcagctggtgatggtcttggaaggagaactttacctcatcccatttgctctgctaaag
ggcagctcatccaacgagtatctttatgaacgcttcagtctgattgctgttccctccatc
cgatctctgaacataaattccaagtctcacttacggaagaatgctcccttatattcaagt
tctacctccatggctgctgttattggaaatccgaagcttcctccatcagtgatggataga
tggctgtggggaccaatgccctcagcagaagaggaggcctacatggtttctgaattgttg
ggttgtcagcctcttgttggctctttggccacgaaagacaaggtgatgagcgcactcaca
caagctgaatgcgtacactttgccacccacatctcatggaaacttgcagctttaatacta
actccgaacagcgagaacagctctggaacaaataaaagcacctttggaaacacctacacc
attcctgagtctttacagatgcaggacgatgccagtgatgttgaaagcatatcagactgt
ccaccccttcaggaattcctcctgacagccgcagatgtcctggatctcaggcttcctgta
aaactagtggttcttggatcttatcaggaatccagcaacaaagttacagcagatggaatt
attggcttgacgcgggccttcttggctgccggagctcagtgcgtccttgtatctctgtgg
cctgtgcctgttgcagcctcaaaaatgtttgtccatgctttttattcggcattactgaat
ggaatgaaagcaagtgcatccctgtctgaggcaatgaaaacagtacagagcagtaagcaa
tactcacatccatcaaactgggcaggatatatgcttattggaagcgatgtaaagctgaac
agtccctcatcactcatcggtcaagccttatctgagatcctccagaaccctgaccgtgca
agagatgctcttagagttttgttgcatctggtggagaagtccttgcagaggattcagaat
ggacagcgaaactccatgtacacctcccagcagagtgtggaaaataaagtagggggagta
caaggctggcagtcccttctgacagctgtagggtttcgccttgacccaccagcaagtggt
ctcccagcagcagtctttttccccacatctgaccccggtgaccgtctacaacagtgtagt
acaaccatacagtccctcttgggtttgcctcatgcagcacttcaggctctttgtaaactc
atcacagcttccgaaactggagaacagctgattaatcgggctgttaaaaatatggttgga
gtgctgcatcaggtcctggttcagttgcagaccgacaaagatcatgacttttccacagtc
ccaatccaggtgtgcatcagtgttcagctttggagattacctggatgtcatgagttttta
gcagcactaggtttcgatttgtgtgaggtgggccaagaagaagtaattctgaaaactggc
aaacaagccaacaaaagaacaatgcaatttgctctgcaatccctcctagctctttttgat
tctactgagcttccgaaacgccttagtcttgacagttcttcttcacttgaatcactggca
tcttcacaatctgtgtctaacccaatgccaccagggtatcctggtcatccattctctcca
atctgtccagatggcatggcttcagatgctatctcagtctacagtcttagttccattgct
tcatcaatgagttttgtctctaaaccagattgcttacctgaaggagaacacaaactacgt
catgaccatgacagaccaaaaaatcttcattctctcaggacctcagctagaggccagtct
tccccacaaacccagatgtcattaggcaaagaagaacaggaagagtatgagggattttcc
ataataagcaatgaacctcttttgtcatacacagaaagccttgatccaaaccttagacaa
ggcaccattcaggaaacaatacaagtttctgtaaactcaaagggcagtataagcacacct
aactcacctgtaaaactatcgctgattccaagtccaaactcaccattccaaaaagttgga
aaacttgcaagctctgatactggggaatcagatcagtcgagtacagaaacagacagtaca
gttaaatctcaagaagagaacaatcctaaactcaatcctgaagagctggctcaaaagatt
ttagaagagactcaaagccacctgattgctgttgaacgtcttcaaagaagtggaagtttg
aacaaaacaagtcattcacctgatggtgctacaacacctaatggcagttctttgttcagg
tcttcagaaacaagcgcttttagtagacctgtccagaaagggatgccgtctccagttaat
gtgaaaccaaagcctccaactagaagttcctctcttcagaaagtgagctcagggtataat
agcccagcaaactctgaaacttctctaaaagacgcagctagtccccacagtaaccagcct
tccccaagttcagattctccctactttaagttgaaatatcctagctctccatacagttcc
catatttcaagatctcctcgaaatatatccccaagctcaggtcatcaatctcctgcagga
agtacatcatctccagcgctttcatactcctctgctggttctgcccgatcaagtcccgct
gatgccccagatctggataaattaaaacttgctgcaattgatgagaaggtgaaggctatt
cacaatctgaagatgttttggacaagtggccctcagcaaacatcaggtccaatcaaaata
ctgcgtggaactcccggaacaatgacttcaaagaaagacgttcttagcttgttaaacctc
tctccacgacataacaagaaagaagcggctgtagataatcttgaacttaaagaactatct
gctcggaaaaagcaggttgatgctgcacagccaaatccaccaaatggccacaaacacaca
gaaaatattaatgtagcaaatataactcaatccaccccatctattaacatgcctgcttct
ctacgcagcctaaaactgtcctctggaaatgggtacaagttcctttcaccagggagattt
tttccttcttcaaaatgttga
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integrated database retrieval system
