KEGG   Rana temporaria (common frog): 120937562
Entry
120937562         CDS       T07929                                 
Symbol
SYNE1
Name
(RefSeq) nesprin-1 isoform X1
Organism
rtem  Rana temporaria (common frog)
SSDB
Motif
Pfam: Spectrin SYNE1 Spectrin_SYNE1 Baculo_PEP_C CdaS_N
Other DBs
NCBI-GeneID: 120937562
NCBI-ProteinID: XP_040206817
LinkDB
Position
4:complement(360432506..361028222)
AA seq 2218 aa
MLFTSLADNKYIILHRLAEAAERPAKEQMQAILQAENSLKELDTEITELRKRGDQLQVDQ
QSVQELSKLQDTYDELMIIITSRRGGLNQNLALKSQYERALQDLSDLIETGEEKMSGGQK
CIVSSREEVHNMLQKHKEYFQGLELHMILTETLFRKISSYNSPKETQQHSDLMARASSVL
KQAHKRGVELEYILETWMQLDEKYQDLSRQLETIESNIPIVGLVEESEERLKERIQLYQR
FKSSLAEYQPGLYQVLEDGKRLLMSINCSELESSLNQLGEQWLNSTSKVSKELNRLENIL
KHWTRYKNESAELVHWLRSAMDRLDFWTEQSVTVPQELETVRDHLSAFLEFSKEVDAKSS
LKSSVLSTGNQLLRLKKVDTAALRSELAKIDNQWTELLTHIPVVQEKLHQLQMDKLPSRH
AITEVMTWISLMENVIKEDEQNIKNVVGCETIQEYLLKYKGFKIDINCKQLTVDFVNQSV
LQISSQDVESKRSDKTDFAEKLGAMNRRWQILQGLITEKIQLLEGLLESWTDYRNNVLSL
KSWFEKQEKKLQKYQSIGDQASVQNSLKDCQELEELIRAKEKDVEKVGQTGLSLIHNKKE
KVSAIIMDNLGELHQSWANLDCKVCQLKILLQSVLDQWSIYKELYEDLNSYLMEARYSLS
RFRLLTGSMEAVKVQVDNLQSLQEELDKQETVLNKFACVSNKLQNECYLTVTEALKSTLK
EVTSRWNSLLEEISEQLHSSKTLLQLWKKYKDFCTQCSAAVQQQEDRTNQLLKTATNKDI
GDDEIANWIQDCSVLLKNLDTAKISLAGVCEIGEELKHQVDSSAAATILSDHLSLCQRLS
VLEQALQRQQAILQAGVLDYETFVNSLENLEAWIVTAGEVLNGQDPNRSSDLSIIQERME
ELKRQMLHFSSMAPGLDRLNELGYRLPLNDKEIKRMQCLNRDWTMVSSQTTERFSKLQSF
LLHHQTFLEKCETWMEFLIQTEQKLAVEIPGNYQSLLEQQRAHELFQAEMFSRQQILHSI
IIDGQRLLEQGQVDDSSPKFHRDEFNLKLALLSNQWQGVIRRAQQRRGIIDSQIHQWQRY
REMVEKLRKWLVEMSYQPVTGLGNIPIPLQQARNLLDEVQLRDRVLHRQQGSYILTVEAG
KQLLLYADSGAEASLQAELIDIQERWKATTLRLEEQKKQLAFLLKDWEKCEKGIADSLEK
LRTFRKNLSQPLPVNHDELHSEQIRCKELGNAVEGWVEDLAHLTKLKDTFLPFISADDIS
ILNERIELLQRQWEELCHQVSLRRQQVSERLNEWAIFNEKNKELCEWLTQMESKVSQNGD
ISIEEMIDKLRKDYQEEIAVFRENKIQLQHMGERLAKASHESKASEIEYKLSKVNDRWQH
LLDLIGARVKKLKETLVAVQQLDKNMSSLRSWLGHIESELSKPIVYETSDSEEIQRKLNE
QQELQRDIEKHSTGVASVLNLCEVLLHDCDACANDSECDSIQQATRSLDRRWRNICAMSM
ERRLKIEETWRLWQKFLEDFSRFEDWLKISERTAALPSSSCVLYTVAKEELKKFEAFQRQ
VHESLTQLELINKQYRRLARENRTDSACKLKQMVHEGNQRWDNLQKRVTSILRRLKHFIG
QREEFETARDSILVWLTEMDLQLTNIEHFSECDVQAKIKQLKAFQQEIALNNYKIDQIIT
QGEQLLEKSEPLDAAVIEEELDELRRYCVEVFGRVERYHKKLIRLPLTDDEHDFSDREVD
GDETMDLSDLQWHTKSSGGILSPLPSSNHSLSLIVPMRSERSGRDTPASVDSIPLEWDHD
YDLSRDLETAVSQALHSDDEDDKSYFLQGATGLTGESGLLESQIRQLDKALDTSRFHLQQ
TENVIRSRTPTGPELDSSYTGYMRLLGECRGSIDTVRKVSGKLKEEEEKLSGFINLNSTE
TQSAGVIERWELIHAQALNKELRMKQKLQQWQQFMSDLSNIMDWLGETEEELEQLRQLDV
STDIQIIEQRIKKLKELQKAVDSRKAIVLSINLCSSEFTQADTQESKDLQERLSQMNLRW
DRVGSTLEDWRCSLQDALMQCQDFHEMSHGLLLWLENIDRRRGELLPINPSLDSDTLHDH
LKLLTQIKRELLESQLKVALLQDMSCHLLVNAEGKDCLEAKEKVHVIGNRLKVLLKEVTR
HIKEIEKILDISSNQLELSSWSSADELDTSGSLSPVSGRSTPSRQRTVQRRWLRFLPF
NT seq 6657 nt   +upstreamnt  +downstreamnt
atgctgtttacttccttggctgataataaatacatcatactgcacagactggcagaagca
gcagagcgaccagcgaaagaacagatgcaggctattttacaagcagaaaatagtttaaaa
gaactggatacagaaattactgagttgagaaaacgtggagatcaactacaggtggaccag
caatcagtgcaagaattgtcaaagcttcaggacacatatgatgaattgatgataataatc
acctcaagaagaggtgggctaaatcagaacctagctctaaagagtcagtatgaaagagct
ctgcaagacctgtctgacttgattgaaacaggagaagagaagatgtctggaggacagaaa
tgcattgtctcctctagagaagaggtccacaatatgcttcagaagcacaaggagtatttc
caaggcttggagttacacatgatcctcaccgaaacacttttccggaaaatcagcagctat
aattctcctaaggagactcagcaacactcagatttaatggcgagagcatcttctgtactg
aaacaagctcacaagagaggggtagagctggaatacatactagagacatggatgcaattg
gatgaaaaatatcaagacctaagcaggcagctggagacaattgagagcaacatacctatt
gtggggcttgtggaagaatcagaagaaagactaaaagaaagaattcaattgtatcagcgc
tttaagtccagcctggcagagtaccaaccaggactttaccaggtattggaagatgggaag
agattgctgatgtcaatcaattgctcagagctagagagctcactgaatcaactaggagag
caatggctgaacagcaccagcaaggtttccaaggaactgaaccgactggagaatatcctc
aaacactggacaagatataaaaacgagtcagctgaacttgttcactggttgcgctctgca
atggatagactggacttttggactgaacaatctgttactgtgcctcaagagctggagact
gtcagagatcatctaagtgctttcttggaattctccaaagaggttgatgccaaatcttct
ctgaagtcatcagtgctgagcactggaaaccagctgcttcgtctgaagaaagtggataca
gcagcacttcgttctgaactggcaaaaatagataatcagtggacagagctcctcactcat
atccccgtagtacaagaaaagcttcatcaactgcagatggacaagcttccttcacgccat
gccattactgaagtcatgacttggatttccctgatggaaaatgtaattaaagaagatgaa
cagaacatcaagaatgttgtaggatgtgaaactattcaagaatatctgctgaaatacaag
ggatttaagattgacataaattgtaagcagctgacggtggactttgtgaatcagtcagtt
ctccagatcagcagccaggatgtggaaagtaagaggagcgacaaaacagattttgctgag
aagctgggagccatgaacagacgctggcagatccttcaaggattgataacagaaaagatt
cagctgctagagggattgctggaatcttggacagactataggaacaacgtgctgagtcta
aaatcttggtttgagaaacaagaaaagaaactgcagaaatatcaaagcatcggagatcaa
gcttcagtccagaacagcttaaaagattgccaggaactggaagaacttattagggctaaa
gaaaaagacgtggagaaagttggacagactggactttccttaattcataacaaaaaagaa
aaagtcagtgcaattattatggacaaccttggtgaacttcaccaatcctgggctaatctg
gattgcaaggtgtgtcagctaaagatattgttacagtcagtacttgatcagtggagcatt
tacaaggaactgtacgaagatctgaacagttatttgatggaagccaggtattccttgtcc
cgcttccggctcctgacaggatccatggaagctgtgaaagtccaagtggataatctgcag
agtctacaggaagagctggacaaacaggagacagttttaaacaagtttgcctgtgtatca
aacaagcttcagaatgaatgttacctgactgtgacagaagcactgaagagcactttaaaa
gaggttacctcaaggtggaatagtttattggaagaaatttcagagcagctgcactcaagc
aagactttgctccagctatggaagaagtacaaagatttctgtactcagtgttctgccgct
gtacagcagcaagaagaccgcaccaatcagttactgaagactgcaaccaacaaggacata
ggggatgatgagattgcaaactggatacaggactgcagtgttcttttgaaaaatctggat
acagcaaaaatctcattggctggtgtttgtgaaattggagaggagcttaaacaccaagtg
gattcatctgcagctgcaaccatcttatctgatcacttatcgctgtgccagcgtttgtca
gtattggagcaggctctccaaagacaacaggccatcctccaggctggagtgttagattat
gaaacatttgtgaatagtctggaaaacctggaggcctggattgtgactgcaggagaggtg
ttaaatggccaggaccctaatcgctcatcagacctttccataattcaagagaggatggaa
gaactaaaaaggcaaatgttgcactttagtagcatggccccaggcttggaccgtcttaat
gagttaggctacagattaccactaaatgataaggaaatcaaaaggatgcagtgtttgaat
agagactggacaatggtgtcatctcagacaacagaaagattcagtaagttacagtccttc
ttgctacaccatcagacgttcctagaaaaatgtgagacttggatggagttcctaattcag
actgagcagaagctggcagtagagataccaggaaactatcaaagcctactagaacagcag
agagctcatgagctattccaagcggaaatgttcagtcgccagcagattttgcactctata
atcattgatggacaacggctccttgagcagggacaagtggatgatagctcacctaaattt
catagggatgagtttaaccttaaacttgccttgctgagtaaccaatggcaaggagtaatc
cgtcgggctcaacaaaggagggggataatcgacagtcagatacatcagtggcaacgctac
cgagagatggtagagaagttacgtaagtggctggtggagatgtcctatcaaccagtgaca
ggcctggggaacattccgataccactgcagcaagccaggaatcttctggatgaagtccag
ctaagagacagagtacttcacagacagcaagggagctacatcctgactgtggaggctggg
aagcagctgcttctctatgctgacagtggggcggaggcttccttgcaggcagagctcatt
gacattcaagagcgatggaaggccaccacactgagactggaggagcagaagaaacagctt
gcattcctattgaaagactgggagaaatgtgaaaaaggaatagcagattccttggaaaag
ctaagaacattcaggaaaaacctctctcagccattgcctgtcaaccatgatgaactccat
tcagaacagatcagatgcaaggaacttggaaatgcagtggaaggatgggtggaggatctt
gctcatctgacaaaactgaaggacacctttttaccatttattagtgcagatgatatttct
attcttaatgagcgcattgaactgctgcagagacagtgggaggaactgtgtcatcaggtc
tctttacgtcggcagcaagtcagtgagaggcttaatgagtgggcaatttttaatgaaaag
aacaaagagctgtgtgagtggctgacccagatggaaagcaaggtctctcagaatggggac
attagcattgaagagatgattgacaagctaagaaaggactaccaggaggaaattgcagtt
tttcgggaaaacaaaatccagctgcagcatatgggagagagactggctaaggccagccac
gaaagcaaggcatcagagatcgagtacaagctgagcaaagttaacgacagatggcagcat
ctactggaccttattggtgcaagagtgaagaaactaaaggagaccttggttgcagtacag
cagttggataagaacatgagcagcctaagatcatggctgggtcacatagaatcagagctg
tccaaacctatcgtgtacgaaaccagtgattctgaagagatacaaaggaagctaaatgag
cagcaggaactccagagagacatagagaagcacagtaccggagttgcatcggttctaaat
ctctgtgaagtacttctgcatgactgtgatgcttgtgccaatgacagcgaatgcgattcc
attcagcaggccacccgcagtcttgaccgcaggtggaggaacatctgtgccatgtctatg
gagaggagactcaagatcgaagagacatggcgcctttggcagaaatttctggaggacttt
tcgcgctttgaagactggctgaaaatttcagaacggacagctgccttacctagttcttct
tgtgtgctttatacagtggcaaaggaagaactgaaaaaatttgaggctttccaaagacaa
gttcatgagagccttactcagctggaactcataaacaaacagtatcgccgcctggctcgg
gagaaccgcactgattcagcatgtaaactaaagcaaatggtccatgaaggcaaccaacgg
tgggataacctgcaaaaaagagttacatctattctgaggaggctgaagcattttattggc
cagcgagaagaatttgagactgcacgagacagcatcttggtttggcttaccgaaatggac
cttcagttaacaaacattgaacatttctctgagtgtgatgttcaggcaaaaatcaaacag
cttaaggccttccagcaagagatagccttgaacaactacaagattgatcaaattattact
cagggagaacaactattagaaaagagtgaacctcttgatgccgctgttattgaggaagaa
ctggatgaactgcggaggtattgcgtggaagtctttggtcgcgttgaacgttatcacaaa
aagctcatccgtcttccgttgacagatgatgaacatgacttctctgaccgagaggtggat
ggagatgagacaatggatctgtctgatctgcagtggcacacaaaaagttcaggtggcatc
ctctcacctctgccttcttcaaaccactcactgtccctaattgtaccaatgaggagtgaa
agatcaggtcgagatacaccagctagtgtggattccataccactggagtgggatcatgac
tatgacctcagccgggatttagaaaccgcagtctcccaagcattgcactcagatgacgaa
gatgacaaaagttactttcttcaaggagcaactggtttaactggagagtctggtttgtta
gaatcacagatccgtcagctagacaaggcactggataccagccgctttcatttacagcag
acagagaatgtcattcgcagcaggacccccactggacctgaactagattcaagttacaca
ggatatatgaggcttcttggagagtgtcggggtagcatagacactgtgaggaaagtaagt
gggaaattaaaagaggaagaggagaaactctcaggtttcattaacctaaacagcacagag
acacaatctgctggtgttatcgagcgatgggaattaattcatgcacaggccttaaacaag
gaactccgaatgaaacagaaactccagcaatggcagcagtttatgtcagatctgagcaac
atcatggattggttgggagaaacagaggaggagcttgaacaacttcgccagcttgatgtc
agcacagatatccaaattatagaacaaagaatcaaaaagctaaaagaacttcagaaggct
gtagacagtcggaaagctattgtgctgtccattaatctctgcagctccgagttcactcag
gcagatactcaagagagcaaggatcttcaagagcgcctgagccaaatgaacctaagatgg
gaccgtgtgggcagcacattagaagactggcgctgttcactacaggatgctttaatgcag
tgccaggacttccatgaaatgagtcatgggttactgctttggctagaaaacattgaccga
agaagaggtgaactgcttcctatcaatcccagccttgacagtgacactcttcacgaccat
ctcaagctgttgacgcaaatcaagcgtgaactgctcgagtcacagctgaaggtggcatta
ctgcaagacatgtcctgtcatttgctggtcaatgcagagggcaaggattgccttgaagcc
aaagaaaaggtacatgtcattgggaacaggctcaaagtgctcttgaaggaagtaactcgt
catatcaaagaaatagagaaaatattagacatttcaagcaatcagctggaactatcttca
tggtcttctgcagatgagttagacacctctggatcccttagtccagtgtctggcaggagc
acccccagcaggcagagaacggtccaaagacgatggctcaggttcctacccttctga

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