Rana temporaria (common frog): 120937673
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Entry
120937673 CDS
T07929
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120937673 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtem03021
]
120937673 (POLR1B)
Enzymes [BR:
rtem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120937673 (POLR1B)
Transcription machinery [BR:
rtem03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
120937673 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
30K_MP_C_Ter
Motif
Other DBs
NCBI-GeneID:
120937673
NCBI-ProteinID:
XP_040207012
LinkDB
All DBs
Position
4:complement(385236941..385284662)
Genome browser
AA seq
1135 aa
AA seq
DB search
MDWTQKWDKLPREPSLKKLTDPDYGKPGKKQHPPLQDITRAHIESFNQAMTEGLFQAVQA
IKPMEFRFKDARVSFKIVDAVISQPIVPKGSLCKDPKIYPAECRGRRCTYHGRLTVDISW
YVNDVPNGVIKQSLGYVPIMVKSKLCNLHGLSPKQLVQHHEEEQEMGGYFIINGIEKVIR
MLIMPRRNFPIAMIRPKWKGRGPGYTQYGITMRCVRDEHTAVNMNLHYLENGSIMVNFIY
QKELFFIPLGFALKALVNFSDYQIFSELIKGKEENSFYRECVTQMLRGVMEEGCHSQQQV
LKYLGERFRVKFYLPDWYTDEQAAEFLLEECICIHLKSNFEKFHMLCYMTRKLFTFAKEE
CMEENPDSLMTHEVLTAGQLLLMFLKEKMEGWLVNAKLNLDKRAQKPNLVLNTESIMKIF
GRTTDLTRNCEYLLATGNLRSKTGLGMLQASGLAVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHMTVTCEIVTQTSINTHVQVLLCTLGVT
PVDGIAGKSLADCYQVMLDGAMVGWIDKDLAPNLVNTLRTFKVTQEKKIPPWTEIVLVPM
TGKASLYPGLFIFTTPCRMVRPVRNLAVGKEELIGTLEQVFLNIAIYESEIVPGVTTHQE
LFPHSLMSVVANFIPFSDHNQSPRNMYQCQMGKQTMGFPLMTYQDRSDNKLYRLQTPQSP
LVRPSMYDYFDMDNYPVGTNAIVAVISYTGYDMEDAMILNKSSWERGFAHGSVYKTEFID
LSQKVKSNEDNLVFGIKPEDERVMGKLDEDGLPPVGAILKFGDPFYSYVNQSTGENSIMY
YKSKEDCVVDNIKVCSNDLGIGKFKSVCITMRVPRNPTIGDKFASRHGQKGILSRLWPSE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEENSALE
YFGEMLKGAGYNYYGTEKLYSGISGEELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPVGGRNIQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSEAHVCLECGSLLSPL
LEKPPPSWSSMRNRMHYCSICNRSDTIDTVSVPYVFRYFVAELAAMNINVKLNVS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggactggactcagaagtgggataaactgcccagggagcccagtctgaagaagctgaca
gaccccgactatggcaagcctgggaagaagcagcaccctcctctacaggacatcaccaga
gctcacattgagtccttcaaccaggccatgacagaggggctcttccaggcagtgcaggcc
ataaaaccaatggaatttcgttttaaagatgctcgtgtatcatttaaaattgtggatgcc
gttatcagccaacccatagtacccaagggaagcctctgtaaggatccaaagatttacccg
gctgaatgtagagggcgaaggtgcacctaccatggaaggctgactgtggatataagttgg
tatgtgaatgatgttcccaacggtgtcatcaagcaatcccttggctatgttcctatcatg
gtaaaatccaagctttgtaacttacatgggctttcaccaaagcagcttgtgcagcatcat
gaggaggagcaggaaatgggtggctattttataatcaatggtatagaaaaggtgattcgg
atgctaattatgccaagaaggaattttcctattgcaatgattcgccccaagtggaaaggt
agaggtccaggttatacccaatatggtataacaatgcgttgtgtcagagatgaacacaca
gctgtgaatatgaacctacattatttagagaatggctctataatggtgaatttcatctat
caaaaagaactcttcttcattcctcttggctttgcgctgaaggcacttgttaacttctca
gattatcagatattctcagagttgattaaaggcaaggaggaaaactccttttacagagaa
tgtgtcacccagatgctcaggggcgtgatggaggaaggttgtcacagtcagcaacaagtt
ctcaagtatcttggagagcgattccgtgtcaagttctacctcccagactggtatactgat
gagcaagcggcagagttccttctagaagagtgtatttgcatacaccttaaatccaacttt
gaaaaattccacatgctgtgctacatgactcgaaagcttttcacttttgctaaggaagag
tgtatggaggagaatcctgacagcttaatgacccatgaggttttgaccgcaggacaactg
ttgctcatgtttttaaaggaaaaaatggaaggttggcttgttaatgccaaactcaacttg
gacaagagagctcagaaacccaatctagtgctaaacacagagtccatcatgaaaatattc
ggtagaacaactgatctcacacgaaactgcgaatatttgctggctactggaaatcttcgt
tctaaaactggtcttggtatgctccaggcttctggtctggcagtagttgcagacaagttg
aacttcattcgatatctctcgcacttccgctgtgtgcacagaggtgctgcatttgcgaag
atgagaaccacaactgtccgtcgtcttctaccagaatcttggggttttctatgtccggta
cacacacctgatggcgagccctgtggactaatgaatcacatgactgtgacatgtgaaatt
gtgacgcagacctccatcaatactcacgtgcaggttttgctatgcacattaggtgtcact
ccagtggatggaattgcaggaaagtctttagcagattgctatcaggttatgctggatggt
gccatggtgggctggatagataaagacttggctccaaatcttgtcaatactctaagaacc
tttaaggtaacgcaggaaaaaaagattccaccctggacagaaatagtgttggttccaatg
actgggaaggccagtctgtatcctggactttttatcttcaccactccttgtagaatggtt
cgtcccgtcaggaatctagctgttgggaaagaagagcttataggaacattagagcaggtc
tttttgaatatagcgatatatgaaagcgaaattgtccctggtgtcaccactcatcaggag
ctctttccacacagtctgatgagtgtggtagctaacttcattcccttctctgaccacaac
cagagccccaggaacatgtaccagtgccagatgggtaaacagactatgggctttccgctc
atgacctaccaggatcgctctgacaataaattatatcgtctccaaaccccacagagtcca
ctagtgcgtccctctatgtatgattactttgacatggataattatcctgttggcaccaat
gctattgtggccgtcatttcatacactggatacgatatggaagatgctatgattttaaac
aagtcatcttgggagagaggatttgcccatggcagtgtgtacaaaacagaatttatagat
ctttcacaaaaagttaaaagtaacgaggacaatttagtgtttggcatcaaaccagaagat
gagcgggtgatgggaaaactggatgaagatggcctacctccagtgggagctatactgaaa
ttcggagatccattctatagttatgtcaatcaaagtactggagagaactccattatgtat
tacaagagtaaagaggactgtgttgtggacaacatcaaagtttgcagcaatgacttgggc
attggaaagtttaaatctgtttgcatcaccatgagggtgccacgaaacccaaccatcgga
gataaatttgcgagccggcatggccagaagggcatcctcagtagactctggccatcggaa
gatatgccattcactgaaagtggaatggttccagacattctgttcaacccacatggtttc
ccatcaagaatgaccattggaatgttgatagagagcatggctggtaaatcggcggccttg
catggtttgtgccatgatgccacaccttttaccttctctgaagagaattcggctctggaa
tattttggtgagatgctgaagggagctggctataactactatggcacagagaaactatac
agtggtattagtggggaggagctagaggcagacattttcattggagtggtctactaccag
cgactgcgtcacatggtttctgacaagttccaagtaaggacaacaggagctcgagacaag
gtgaccaaccagcctgtgggtggcaggaacatacagggaggtatacgctttggagagatg
gaacgtgatgctttgttggctcatggtacatccttcttgctccacgatagactttttaac
tgttctgataggtctgaggcccatgtgtgtttagaatgtggcagccttctgtccccttta
ctagagaagcctcctccatcctggtcatcaatgcggaacaggatgcactattgttcgatc
tgcaatcgttctgatacaattgacactgtgtctgtgccttacgtgtttcgatattttgtg
gcagagttggcagcaatgaacatcaatgttaaactaaatgtgagttaa
DBGET
integrated database retrieval system
