Rana temporaria (common frog): 120937739
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Entry
120937739 CDS
T07929
Symbol
SNX5
Name
(RefSeq) sorting nexin-5
KO
K17920
sorting nexin-5/6/32
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120937739 (SNX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120937739 (SNX5)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
120937739 (SNX5)
Membrane trafficking [BR:
rtem04131
]
Endocytosis
Macropinocytosis
Sorting nexins
120937739 (SNX5)
Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120937739 (SNX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
LcrG
Motif
Other DBs
NCBI-GeneID:
120937739
NCBI-ProteinID:
XP_040207128
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Position
4:complement(400455863..400533701)
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AA seq
437 aa
AA seq
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MEDVGVACAELGAGGVRKRPSEKAAIPGRRKEVSRCSMATLTVEGDDSGKARSVSVDLNM
DASLQIDIPDAISERDKVKFTVHTKTTLNIFQNPEFSVTRQHDDFNWLHDSLTENEEYAG
IIIPPAPAKPDFDGPRDKMQKLGEGEGSMTKDEFAKMKQELEAEYLAVFKKTVSVHEVFL
QRIASHPILSKDRNFHIFLEYDQDLSVRRKNTKEMFGGFFRSMVKSADEVLLSGVKEVDE
FFEQEKIFLVNYHNRIKDSSFKAEKMTRSHKNVADDHIHVSAAMVSVAESESTPLRKSLL
KLAELFEKLKKVEARVSSDEDLKLSELLRYYVLNIEAAKDLLHRRTKSQVEYENSNKALD
KARLKSKDVKQAELHQQECCQKFEKLSESGKQELIGFKKKRVSAFRKNLVEMTELEIKHA
KNNISLLQSCIDLFKNS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgtgggtgtggcctgtgcggagttgggtgccggtggagtcaggaagcgtccc
agtgagaaggcggctatcccggggaggcgcaaagaggtctcccgctgcagcatggctact
ctgacggtggagggagacgatagcggcaaggctaggtctgtatctgtggatctgaacatg
gatgcatcgctacagattgacattccagatgcaatcagcgaacgagataaagtgaaattc
accgtccacacaaagactaccctgaacattttccagaacccagagttctctgtgacccgc
cagcacgatgacttcaactggttacatgactctcttacggagaacgaggagtatgctggc
attattattccacctgcacctgcaaaacctgacttcgatgggcccagggacaaaatgcag
aagctgggtgaaggagaaggctctatgacaaaggatgaatttgccaaaatgaaacaggaa
ttggaggcggaatatctggcagtttttaagaaaactgtgtctgtccatgaagtttttctt
cagagaattgcctctcatcccatcttgagcaaagaccgaaacttccatatattcctggaa
tacgaccaagatttaagtgtaaggcggaaaaacactaaagagatgtttggtggattcttc
cgaagtatggtgaagagtgctgatgaagttcttctctccggagtaaaggaagttgatgaa
ttctttgagcaagaaaaaatctttcttgtgaattatcacaataggatcaaggattccagt
tttaaggctgagaaaatgacaagatcccataaaaatgttgctgatgatcacatccatgtt
tcggctgccatggtctctgtggctgaatcggagagcacaccacttagaaaatccttactt
aaacttgcagagttatttgaaaagctcaaaaaagtagaagcaagggtttcatcagatgaa
gacttaaaactttctgagctcttaagatactacgtgcttaatattgaggcagccaaggac
cttttgcacaggaggacaaaaagtcaggtggaatatgaaaattccaataaagctctcgat
aaagctcggttaaaaagcaaagacgtgaagcaagccgaattgcatcagcaagagtgctgc
cagaaatttgagaagctctcggagtctggaaagcaagagcttattggcttcaagaagaag
agagtgtctgcctttcggaaaaaccttgtagaaatgaccgaactagaaattaagcatgcc
aagaataacatctcattactacaaagctgcattgaccttttcaagaacagctaa
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