Rana temporaria (common frog): 120937806
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Entry
120937806 CDS
T07929
Symbol
JAG1
Name
(RefSeq) protein jagged-1
KO
K06052
jagged-1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04330
Notch signaling pathway
rtem04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120937806 (JAG1)
04371 Apelin signaling pathway
120937806 (JAG1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
rtem04090
]
120937806 (JAG1)
CD molecules [BR:
rtem04090
]
Proteins
120937806 (JAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
EGF_DL_JAG
EGF_2
DSL
EGF_Teneurin
JAG1-like_EGF2
EGF_CA
CD34_antigen
EGF_3
Spectrin_Anc-1_2
DUF6479
Motif
Other DBs
NCBI-GeneID:
120937806
NCBI-ProteinID:
XP_040207235
LinkDB
All DBs
Position
4:417226965..417307085
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AA seq
1219 aa
AA seq
DB search
MLLRRRTPSAGWSAFRLLLVLLCLRVKVSVASGQFELEILSMQNPNGELLNGNCCDGSRN
TVDRKCTRDECDTYFKVCLKEYQSRVSAGGACSFGSGSTPVLGGNSFSLKYSRNSDKNRI
VLPFSFAWPRSYALVVEAWDYNNETNDPDDIIDKALHSGMINPNRQWQILKQNAGMSHFE
YQVRVICDEHYYGFGCNKLCRPRDDFFGHYACDQNGNKTCMEGWMGPECNKAICRQGCSP
KHGTCKIPGDCRCQYGWQGQYCDKCIPHPGCVHGTCTEPWQCLCETNWGGQLCDKDLNSC
GTYQPCLNGGTCSNTGPDKYQCSCPEGYSGQNCEIAEHACLSDPCHNGGSCMETTGGFEC
NCAPGWTGPTCTSNIDDCAPNPCGHGGTCQDLVDGFKCICPSQWTGKTCQIDANECEVKP
CVNANSCRNLIGSYYCDCIPGWTGQNCDININDCIDQCQHGGTCRDLVNGFRCICPPGYA
GERCEKDVNECASNPCMNGGHCQDEINGFQCLCPAGFSGNLCQLDIDYCKPNPCQNGAQC
FNLATDYFCNCSEDYEGKNCSQLKDHCRTTPCEVIDSCTVAVASNNTPEGVRYISSNVCG
PHGKCKSQPGGKFTCECNKGFTGAYCHENINDCESSPCKNGGTCIDGVNSYKCICSEGWE
GTYCEIDINNCSKNSCHNGGTCRDLVNDFYCECKNGWKGKTCHSQDSQCDENTCNNGGTC
YDQGDTFKCMCSPAWEGTTCNIARNSSCLPSPCFNGGTCVVRGDSFTCVCKEGWEGPTCF
QNTNDCNPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCPYGATCVDEIN
SYRCICPPGHSGPKCQEVTGKSCLINGHATPDGAKWDDDCNACQCLNGKVACSKVWCGPQ
RCDLNLKSRNECPPGQSCVPIKDDHCFVPPCTGAGECWPSNQPPLKTKCNANASYQDNSC
ANITFTFNKEMMSPGLTTESICNELRNLNILKNATAEYSIYITCEPSPLANNEIHVTISA
DENRDGRNPVQEIIEKIIDLVSKRDGNNTFIASVAEVRVQTQSKNRTDFLVPLLSSILTV
AWVCCLVTAFYWCIRKRRKHTSQSHAATEDNTTNNVREQLNQIKNPIEKHAANSVPIKDY
ENKNSKIAKIRTHNSEVEEDDMDKHQQKSRYVKQPAYTLVDRDEKPPISTPTKQPNWTNK
QDNRDLETAQSLNRMEYIV
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgctcttacggaggagaaccccgtccgccggctggtcagccttcaggcttctccttgtc
ttgctgtgcctgcgggtgaaggtgtctgtagcgtcgggccagttcgagttggaaatctta
tctatgcagaaccccaatggagaattgctgaatgggaattgctgcgatggcagccggaac
accgtggacagaaagtgcaccagggatgaatgtgacacttactttaaagtttgcctaaag
gagtaccagtccagggtgtccgccggaggggcgtgcagcttcggctctggatctacccct
gtcctaggaggcaattccttcagcctgaagtacagccggaacagcgacaagaacaggatt
gtgctccccttcagctttgcctggccgagatcttacgcacttgtcgttgaggcttgggac
tacaataatgaaaccaatgatcctgatgacattatagacaaagccctccactctggtatg
atcaaccctaatcgtcaatggcaaatattaaagcaaaatgccgggatgtcccattttgag
tatcaagtccgagtaatctgcgacgagcattattatggctttggctgcaacaaactatgt
cgaccaagagatgatttctttggacattatgcctgcgatcagaatggcaacaaaacctgc
atggaaggctggatgggacccgaatgtaacaaagcaatatgtcgtcaaggctgtagccca
aagcatggtacctgtaagattcctggagattgccgatgccagtatggatggcagggacag
tactgcgacaagtgcattcctcacccaggatgtgtccatggcacttgcactgaaccatgg
cagtgtctgtgtgaaacgaattggggtggtcagctctgtgacaaagatttgaactcctgt
ggaacatatcagccttgtctaaatggaggaacctgcagcaacaccggccctgacaaatac
cagtgttcctgtccggagggttactcggggcaaaactgtgaaatagctgaacacgcctgt
ctgtctgatccttgccacaatggtggaagctgcatggagaccacgggaggctttgaatgc
aattgtgctcctggatggaccgggccaacctgtaccagcaacattgatgactgcgcgcca
aacccatgtgggcatggtggaacctgccaggatctggttgatggattcaaatgtatttgc
ccttcccagtggactggcaaaacatgccaaatagatgcaaacgagtgtgaagtcaaaccc
tgtgtgaatgcaaattcttgcagaaacctcattggcagctactattgcgactgcatccct
ggctggactggtcaaaattgcgacatcaatatcaacgattgcatcgaccagtgccagcat
gggggaacttgcagggacttggttaatggttttcgctgtatctgtccgcccggctatgca
ggggagcgttgtgagaaagacgtcaatgaatgtgccagcaacccttgtatgaatgggggt
cactgccaggatgaaatcaatggatttcaatgtctctgtcccgctggtttctctggaaac
ctctgtcagttggacatagattactgcaagcccaacccttgccagaacggagcccagtgc
tttaatctcgccaccgattacttctgtaactgctccgaggactacgaaggaaagaactgc
tcgcaattaaaagatcactgccgcactactccctgcgaagtgattgacagctgtacagtt
gcagtggcttccaacaataccccggagggtgtgaggtacatttcctccaatgtttgtgga
ccacatggcaaatgcaagagccaacctggaggcaaattcacctgcgagtgcaacaagggc
ttcactggcgcatactgtcatgaaaacatcaatgactgtgaaagcagcccatgtaagaat
ggaggaacatgcatcgatggggtgaactcctacaagtgtatttgtagtgaaggatgggag
ggaacctactgcgaaatagacataaataactgcagtaaaaattcttgccacaatggaggt
acttgtcgggacttggttaatgatttctactgtgaatgcaagaatgggtggaaaggaaag
acctgccactcccaggacagccagtgcgatgagaacacctgcaacaatgggggcacctgc
tatgaccagggggatacatttaagtgcatgtgttctcctgcatgggaaggcaccacttgt
aacattgcaagaaacagcagctgtttgccaagtccttgcttcaacggtggaacttgtgtt
gtccgcggggactctttcacttgcgtctgcaaagaaggctgggaaggcccaacatgcttt
cagaataccaacgactgcaacccacatccatgctacaacagtggaacatgtgtcgatggg
gacaactggtatcgatgcgaatgtgcacccggatttgccggtccagactgtagaataaat
attaatgagtgccagtcctcaccgtgtccttatggagcgacatgtgtagatgaaattaac
agctaccgttgcatctgtccacctggccatagtggtccaaagtgtcaagaagttactgga
aagtcttgtctaattaatggacatgctacaccagatggagccaaatgggatgatgactgc
aacgcgtgtcaatgtctcaatggaaaggttgcctgctccaaggtgtggtgtggcccgcag
cgctgtgacttaaaccttaaaagtcgcaatgaatgccctcctggacagtcttgtgttccc
attaaagacgaccactgcttcgttcctccctgcactggagcgggtgaatgctggccgtcc
aatcagcctccgttgaagacaaaatgtaacgctaacgccagttatcaagacaacagttgc
gcaaacatcacgttcaccttcaacaaagagatgatgtcaccgggcctcactacagagagc
atttgcaatgaactgaggaatctgaacatcttgaagaatgctacagctgaatattccatc
tacataacctgcgagccatctcctttagcaaacaatgagatccacgtgactatatctgct
gatgaaaaccgagatggcaggaatcctgttcaagaaatcattgaaaaaataattgacctt
gtgagcaaacgagatggaaataacactttcatcgcatcagtggcagaagtccgagtacag
acacagagcaagaacagaacagatttccttgtacccttactgagctccatactgacagtg
gcctgggtttgttgcctggtaaccgcattttactggtgtatcaggaaacggagaaagcac
actagccaaagccacgcggccacggaggacaacaccacaaacaatgtgcgggaacagctc
aaccagatcaaaaaccccatcgaaaaacacgcagcaaacagcgtccccattaaagactac
gaaaacaaaaattccaaaattgcaaaaataaggacacacaactccgaagtggaagaagac
gacatggacaagcaccagcagaaaagcagatacgtcaagcagccagcctacacgctggta
gacagagatgaaaagccacctattagcactcccacaaaacaaccaaactggacaaataaa
caggacaacagagacttagaaacagcacagagtttaaaccggatggagtacattgtatag
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