Rana temporaria (common frog): 120937834
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Entry
120937834 CDS
T07929
Symbol
PARP1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03410
Base excision repair
rtem04210
Apoptosis
rtem04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120937834 (PARP1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120937834 (PARP1)
04217 Necroptosis
120937834 (PARP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtem03032
]
120937834 (PARP1)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120937834 (PARP1)
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120937834 (PARP1)
Enzymes [BR:
rtem01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
120937834 (PARP1)
DNA replication proteins [BR:
rtem03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120937834 (PARP1)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
120937834 (PARP1)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
120937834 (PARP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
120937834
NCBI-ProteinID:
XP_040207277
LinkDB
All DBs
Position
4:421507373..421586108
Genome browser
AA seq
1008 aa
AA seq
DB search
MAESTDKLYRAEYAKSGRASCKKCGDSIAKQSLRLALMVQSPMFDGKVPHWHHYACFWKR
ARVLSHGDIDGFTELRWEDQEKIKKAVETGGASAGAGGGDAKGGKADMTLNDFGAEYAKS
NRSTCKGCEQKIEKGQIRLSKKSVDVERPQLGMIDRWYHPDCFVSRREELGFLPMYNASQ
MKGFIILNAEDQEALKAKLPAVKNEGKRKGDELDGSAMSKKKLKKEKEKESKLEKLLKEQ
TELVWSIKDELKKVCSTNDLKELLIANKQQVPSGETNILDRVSDGMAFGALLPCEECQGQ
VVFKTDAYYCTGDISAWTKCVAKTQTPSRKDWVTPKEFHEVPYLKKFKFKRQDRAFPPSV
APTPVSAPAPAKLVVKEEVLPEGKPLTNMTVMLIGKLSKNKDDVKTIIEELGGKTTGSAN
KATVCVSTQKEVEKMSKKMEDVKAANIRVVSEDFLNELQSGKSCQDLLAQHGISTWGAEI
KQEAKPEPPAKSKTAIGKSTGKVKEEQGSSKAEKKMKLTVKGGAAVDPDSGLENSCHVLE
KSGQIFSATLGLVDISRGTNSYYKLQLIEHDRDARFWVFRSWGRVGTVIGSNKLEEMSSK
EEAVDHFLNLYQDKTGNAWHSTNFTKYPNKFYPLEIDYGQEEDVVKKLSVGAGTKSKLAK
PVQELIKLIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSILNDVQQAVSDNAPES
RLLDLSNRFYTLIPHDFGMKKPPLLDNVEYIQAKVQMLDNLLDIEVAYSLLRGGTDDSEK
DPIDVKYEKVKTDIKVIDKDSEEAKIIHEYVKNTHAETHNAYELEVLDVFKIEREGERQR
YKPFKQLHNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGVYFADMVSKSANY
CHTTPSNSTGLILLGEVALGSMYELKAASHITKLPKGKHSVKGLGRTAPDPTATVQLDGV
DVPLGKGMSTNINDTSLMYNEYIVYDIAQVNLKYLLKLKFNYKGGLLW
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggccgagtccaccgacaagctctaccgggccgaatacgccaagagcggccgagcctcc
tgcaagaaatgcggcgacagcatcgccaaacagtcgctgcggctggcactcatggtgcag
tcgcccatgtttgatgggaaagtaccacattggcaccattatgcctgtttctggaagcgt
gcacgggtcttatcccatggggatattgatggcttcacagagcttcgatgggaagatcag
gaaaagattaagaaggcagtcgaaaccggaggtgcctcagcaggggctggcggaggggac
gccaaaggaggcaaagctgacatgacactgaatgattttggagctgaatatgcaaagtcc
aacagaagtacatgcaaaggctgtgagcagaaaattgagaagggtcagatcagattatct
aagaaaagcgtggatgtggagcgacctcagcttggcatgattgatcgctggtaccaccca
gactgctttgtaagccgccgggaagagcttggtttcctaccaatgtacaacgctagccag
atgaagggttttatcattctgaatgctgaagaccaggaagctctaaaggccaaactgcct
gcagtgaagaatgaggggaagagaaaaggggatgagctggatggatctgctatgtccaag
aagaaactaaagaaagaaaaggaaaaggaatccaagcttgaaaagctgctaaaggaacag
acagagcttgtttggagtataaaagacgaactgaagaaagtgtgcagcaccaacgatctt
aaagagctgcttatagccaacaaacagcaggtgccatctggagaaaccaatatcctggac
agagtatcagacggcatggcttttggtgctcttcttccttgcgaggaatgtcagggacag
gttgtcttcaagactgatgcttattactgtacaggggacatcagtgcctggaccaaatgt
gttgctaaaacacaaacccccagtagaaaggattgggttacgccaaaggagttccatgaa
gttccatatttgaaaaagttcaagtttaagaggcaggacagagccttccctccatctgta
gctccaacacctgtcagcgctccagctcctgctaagctggtagttaaagaggaagtcctt
ccagaaggcaagccgctgacaaatatgactgttatgcttatcggcaagctgtccaagaac
aaagacgatgttaagacgataattgaagaactaggcggaaagacgactggatctgccaac
aaagccacagtatgcgtcagcacccaaaaggaggtggagaagatgagtaagaaaatggag
gatgtaaaggcagccaatattcgagtggtgagcgaggacttcctgaatgagctgcagtct
ggcaagagctgccaggacctgcttgcccagcatggcatctctacttggggtgcagaaata
aaacaggaggcaaaaccggagcccccagcaaaatcaaagacagcaattgggaaaagtact
ggcaaagtaaaggaggagcaagggagcagcaaggctgagaaaaaaatgaagttaactgtt
aaaggtggagcagctgttgatccagactcaggacttgaaaattcatgtcatgtgttggag
aaaagtggccagatctttagtgccaccctgggcctggtggatatatcccgagggacaaac
tcctactataaactgcagttgatagaacatgacagagatgccaggttctgggtcttccgg
tcgtggggccgagttggaacagttattggcagtaacaaactggaggaaatgtcttctaaa
gaggaagctgttgaccattttcttaatctgtatcaagacaagactggcaatgcctggcac
tccaccaacttcaccaaatatcccaataagttttatccattggagatagactatggccaa
gaggaggatgtggtgaaaaagctgtcagttggagctggaacaaagtccaaacttgcgaag
ccagtgcaagaactcatcaaattgatatttgatgtggagagcatgaagaaagccatggtg
gagtttgagattgatttgcagaagatgcccttgggaaaacttagcaagcgtcagattcaa
agtgcatactctatcctgaatgatgtacagcaggctgtatctgacaatgctcctgaatct
cgtttgctggacttgtccaatcgcttctacacactaatacctcatgattttggaatgaag
aagccccctctcctggataacgtggagtacatccaggcaaaggtgcagatgctggataat
ctgctagatatagaggtggcttacagtcttctgaggggtggcacggatgactcagagaag
gatcctattgatgtgaaatatgagaaggttaagactgatattaaggttatcgataaggac
tctgaagaagccaagataatccatgaatatgttaagaacacacatgccgagacgcacaac
gcctatgaacttgaggtccttgatgttttcaagattgaaagagaaggcgagagacagagg
tataagccgtttaaacagttacacaaccgtcagctgctctggcacgggtcacgaaccaca
aactttgctggaatcttgtctcaaggtctgcgcattgctcctcctgaagcacctgttact
ggttacatgttcggtaaaggtgtttattttgctgacatggtgtctaaaagtgcaaactac
tgccacacaacgccaagtaactcgacaggtttgatcctactgggagaggttgctcttgga
agcatgtatgagttgaaagctgcatctcacataacaaaattacctaagggtaaacatagt
gtgaaaggtttgggcagaactgcacctgatcctactgctactgtacaacttgatggagtg
gatgttcctctcgggaaaggcatgtccaccaacattaatgacaccagtctaatgtataat
gaatatattgtgtatgacattgcccaggtgaacctgaagtacctcctgaagctgaagttc
aactacaaaggcggacttttgtggtga
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