Rana temporaria (common frog): 120937923
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Entry
120937923 CDS
T07929
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120937923
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtem02000
]
120937923
Transporters [BR:
rtem02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
120937923
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
120937923
NCBI-ProteinID:
XP_040207417
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Position
1:232143616..232215456
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AA seq
589 aa
AA seq
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MSEENSTAPADKYPKQDATTPNNNSLPLSLSQTDSRDKWSKKMDFLLSVIGFAVDLGNVW
RFPYICYQNGGGAFLIPYIIMAIFGGVPLFYMELALGQFHRIGAIPIWKHICPIFKGIGY
AICIIGLYVSFYYNTIIAWALYYLYSSFSTTLPWTSCDNSWNTENCTNYFGKNNISWNNF
SRSPAEEFYTRHVLGIQEADGLDHVGGLRWQLLICLFLIFTIVYFSLWKGVKTSGKVVWV
TATFPYVVLFILLIRGATLPGAWRGILFYLRPNWEKLTDTGVWVDAATQIFFSLGPGFGV
LLALASYNPFDNNCYRDAIITSVVNCLTSFLSGFVIFTVLGYMAEMRDVEVEDVAKDKGP
SLLFITYPEAIANMVGSTFFAIIFFLMMITLGLDSTFGGLEAVITAIMDEYPHILGKRRE
LFVLGLVIVCFTGSLSTLTHGGAYVVKLLEEFGAGCSIIAVVFLEAISVSWFYGIQRFCN
DIKSMLGFSPGIYWRVCWVAISPAFLAFIIVSSFMDQPPLMLFDYKYPEWTITVGYLIGA
SSFIWIPVYMVYKLVWTPGSLKQRLAVCIRPENTIRDHQPDSLCMTMAP
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagagaactccacagctcctgcagacaagtaccccaaacaggatgccactacc
cctaacaataactcgttgcctctttcactttctcagactgactcacgtgacaaatggagc
aaaaagatggactttctcctctctgtcattggatttgctgtggatctgggaaatgtatgg
aggttcccttacatctgttatcagaatggtggaggagcattcctgatcccatatataatt
atggctatttttggaggtgtcccactattctacatggagttagctctaggacagtttcat
agaattggtgctatccccatttggaaacacatatgccctatttttaaaggcattggatat
gctatatgcatcattggattatatgtgtctttctactacaacaccattattgcctgggct
ttatactatttgtactcctctttttccacaaccctaccatggactagttgtgacaattca
tggaatacagaaaactgcactaattattttggaaagaataacatctcttggaataacttt
tccagatctcctgctgaagagttttatacgaggcatgtattgggtatacaagaggcggat
ggtttggaccatgttggtggcttgcggtggcaacttcttatctgtttgttcctcatcttt
actatagtttactttagtttgtggaaaggagtgaaaacttcaggaaaggtggtatgggtg
acagcaacttttccctacgtggttttgttcatactcctgatccgaggtgccacactgcct
ggggcttggagaggcatcctgttctacctgaggcccaactgggagaagctgactgatact
ggagtctgggtggatgccgcaactcagatattcttctctctcggaccaggatttggggta
cttctagcacttgcaagctacaatccatttgataacaactgttacagagatgccattatc
accagtgtggtgaactgtttaaccagcttcctgtctggttttgtgatttttaccgtatta
ggttatatggcagaaatgcgggacgttgaagtggaagatgttgcaaaagataaaggtccc
agtctactatttataacttacccagaggccattgctaacatggttggctcaacattcttt
gcaattatattttttctaatgatgatcacgcttggtttggacagtacatttggtggtctg
gaagctgtcattactgccattatggatgaatatccgcacattctgggcaagaggagagaa
ctttttgtcctaggattggtgattgtctgctttactggctcactcagcactttgactcat
ggaggagcgtatgtagtgaagcttcttgaggaatttggggctggctgttccatcatcgca
gttgtatttttagaagcaatatcagtatcatggttttatggaatacaaaggttctgtaat
gatataaagtccatgttgggattttccccaggtatatattggagagtttgctgggtggca
atcagtccagcatttttagcatttatcatagtgagctcattcatggatcagccacctttg
atgctatttgattacaagtatccagaatggaccattactgttggatacctcattggagct
tcatcctttatctggattcctgtttatatggtttacaaactagtatggactccagggtca
ctcaaacagaggcttgcagtatgcatacgacctgaaaataccataagagatcatcagccc
gattccctgtgcatgacgatggccccatag
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