Rana temporaria (common frog): 120937942
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Entry
120937942 CDS
T07929
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120937942 (TRERF1)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
120937942 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2
zf-C2H2_4
Myb_DNA-binding
zf-met
Motif
Other DBs
NCBI-GeneID:
120937942
NCBI-ProteinID:
XP_040207441
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All DBs
Position
4:440415682..440595385
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AA seq
1118 aa
AA seq
DB search
MEDQQIYKTHLTSNSSDSLYYQQMQHQSSNQVLHHSYDSVDMNASESSSSSPHLSQDSRD
VTSGVQVEVSRSSPWANAGFANHSGAHGGLNCFEQSLQWNPQSNVDDGYQVSYYPQLDNH
PKTTSGALHKLDSFTQVFARQNLRIHAMSQGLPQPSPLLDADSTLRQLLSLKASGEEQTQ
PSTLARYSQVSQQMHQGLADPPQKHSLQQPQTHFYYEYLQPPPQASQSMQQGHQFRQQAQ
TQQVLQQHPQESQQMQYYMQQHPGGQQRPSTQQFSGQMSQYYPVQSAELHHNIQQPQQHH
MQLQQQSYNEDCTAKAENYQQDHSQSMQLIQLGSVPQYVYQNTQTLRHPYKQNLTPRQHL
PQEASPQKQYNVENRQTVLMDSPVAMPSADQLDNNYNQEALGILANTTHQQVLAADNSPY
ILGSQGLHHSPTTPWPQPVPDGKTKTISPDNRTLLPCSVCFKEFRSLPALNGHLRSHGGV
RTNTAHKQEEGEKSQSSEAENLTPIVMPVSVPVKLAPPEPNAQPISKAEKLKGCASDDEM
PILTRMTFTPPSSPKVVSSCASSETIRMHHQSGTKLRKPEDHTKPLQERRKYRHRPEPLF
IPPPSFNVNMSHSGATLYQSQLRSPRIIGETLLGTHELPTYTPPPMLSPVRQGSGLFSSV
ITAAHNAHLPLTPLTPTPRVLLCRFNSIDGTGAIVTPGPGEHTVDVEPRINIGSRFQAAI
PNFQCRPSPKKEMHKATLVWKPLPDLEKEESQKKVEVFLSMSCSSVLPGGGTNLEYALHS
LFDTNGNIMSALEMLLLKEMPRLKSHPLADYHYAGSDYWNNNEKKSFNKALITCNKDFFY
VQKMIKTKTVSQCVEYYYTWKKILHMGRRHRTRMVELNEDDTTSVDDVDDEELENRKHEE
NSEPAQKSPDPLHPAEVGNLVAENIGPPAVSFVCEMGNCGATFCSKQALNGHARIHAGTS
VHSKVFSSAGASRQKSGTQTGYCSVKSSPAHSTTSGETDTTSAFPCKICGKVFYKIKSRN
AHMKTHRQQEEQQKQKAQKAAVAAQMADTISRTPRRTIVPTDGIMLFDHFSLLKPTEEDF
DDDVAQDLQDVLEETEVMHSYLLLDEEDVDLLQDGADL
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcagcagatctacaagactcacctgacatccaacagcagcgatagtttgtat
tatcaacaaatgcaacatcagtccagcaaccaggtgctccaccacagctatgactccgta
gacatgaacgcctccgagtcatcctcttcctccccccacttatctcaggactccagagat
gtcacttcaggggttcaggtggaagtgtccaggtcatctccgtgggcaaacgctgggttt
gcaaatcacagtggagcccacggtggtttaaattgctttgaacaaagcttgcagtggaat
ccacaaagtaacgtagacgatggatatcaggtttcctactatcctcagcttgacaatcac
cctaaaacgaccagcggggccttacacaaactggactctttcacacaagtttttgcacgg
cagaatttaaggattcatgccatgtctcagggtttaccccagccgtcgccactgctggac
gctgacagcacactcaggcagctgttgtcactcaaggcgtcgggcgaggagcagacgcaa
cctagcaccctagctaggtactctcaggtctcccagcagatgcaccaaggattggcagat
ccgcctcagaagcattcactgcaacagcctcagacacatttttattacgagtatttgcag
cccccccctcaggcatcccagtctatgcagcaggggcatcagttcaggcaacaggcgcaa
acccaacaggtactacagcagcatccacaggaaagccagcagatgcagtattatatgcag
cagcacccaggaggacagcagaggccctcaacgcagcagttttctggtcagatgtctcag
tattaccctgtacagtctgcagaactgcatcacaatatacaacaacctcagcaacatcac
atgcagcttcagcaacagtcatataatgaagattgcacagcaaaggctgaaaattaccag
caggaccactcccagagcatgcagctgattcagctggggtcagttccacagtatgtgtat
caaaacacgcagacgcttcggcatccttacaaacaaaacttgacgccacggcagcatcta
ccacaggaggccagcccacagaaacagtataacgtggaaaatcggcaaacagttctcatg
gatagtccagtggcaatgcccagtgcagaccagttagataacaactacaaccaggaggct
ctgggaattttggccaacactactcaccagcaagtcctagctgcagacaacagcccttac
atacttggcagccaaggtcttcaccactcgcctaccacaccttggccacagcctgttcca
gatggaaagacaaagaccatctctccggataacaggaccctgctcccatgctccgtgtgc
tttaaggagttcagaagcctgccagctttgaatggccacttgaggtcgcatggtggggtg
agaaccaacacggcccacaaacaggaggaaggggagaagtcgcagtctagcgaggcggag
aacctcacccccatcgttatgcctgtctctgtgcctgtaaagcttgcgcctccagagcct
aatgcacagcccatcagcaaagcagagaagctcaagggctgtgcatccgatgacgaaatg
cccatcctaacgaggatgacttttaccccgccgtcctctccaaaagtggtcagctcatgc
gcctcttctgaaacaatcagaatgcatcatcagtctggtacgaaattgcgtaaaccagaa
gatcacaccaaacctctccaggaaagaagaaagtaccgccataggcccgagcctctcttc
ataccacctccttccttcaatgtgaatatgtctcactcaggagcaactttgtaccaaagc
caactccgctctccacgcattattggagagacgctgctgggaacccacgagctgccgact
tacacaccgcctccgatgctcagcccagtgcgccagggttcaggactcttcagtagcgtc
atcacagctgcacataatgcccacctccctctcacacctctgacgcccactccaagagtg
ctgctttgtcgcttcaatagcattgacggaactggtgcgattgtaacacctgggcctgga
gaacacactgttgatgttgaaccgaggattaatattggatcaagattccaggcagcgatc
ccaaatttccagtgtcggccatcaccgaagaaggagatgcacaaagccactctggtgtgg
aagcctttgccggatctagagaaggaggagtcacagaaaaaagtggaggtgttcctgagc
atgtcctgctccagtgtcctgccaggcggaggaaccaatttggagtatgctctgcattcc
ctctttgacaccaatgggaacatcatgagcgctctggagatgctgctattgaaagaaatg
ccaaggctaaaaagccacccactagcagactaccactatgcaggatcagactattggaac
aacaacgagaagaagagctttaataaagctttaattacctgcaataaagacttcttctat
gttcaaaagatgataaagacaaaaacggtgtcacagtgtgtggaatattactatacatgg
aagaaaatactgcacatgggtcgtcgccatagaacgcgcatggttgaacttaatgaagat
gacaccacaagcgtggatgatgttgatgatgaagaacttgaaaacagaaaacatgaagaa
aactctgagccagctcagaaatcgccagatcccctccaccccgcagaggtgggcaattta
gtggctgaaaacattggccctcctgctgtttcatttgtgtgcgaaatgggaaactgtgga
gctacgttctgctccaagcaagcattgaacggtcacgctcgtattcatgccgggacgagt
gttcacagcaaagtgttctcatctgctggcgcaagcagacagaagtccggcacacagact
ggatactgttctgtgaagagctcccctgcacacagcaccaccagcggagaaaccgacacc
acgtctgcgtttccctgtaaaatctgcggcaaggtcttctacaagatcaagagccggaat
gcacatatgaagactcacaggcaacaggaggagcaacagaaacaaaaggctcagaaagcc
gccgtggcagctcaaatggctgacactatttccagaacccctagaaggactattgtgccc
actgatggcatcatgctgttcgaccactttagtcttcttaaacccaccgaggaggatttt
gatgacgacgtggcccaggatctacaggatgtcttggaggagacagaggtgatgcactct
tatctattactggacgaagaggatgtggatctcctgcaggatggtgctgacttgtaa
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