KEGG   Rana temporaria (common frog): 120937986
Entry
120937986         CDS       T07929                                 
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    120937986 (MSH2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rtem03400]
    120937986 (MSH2)
DNA repair and recombination proteins [BR:rtem03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     120937986 (MSH2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV MutS_I AAA_27
Other DBs
NCBI-GeneID: 120937986
NCBI-ProteinID: XP_040207517
LinkDB
Position
4:452462620..452662312
AA seq 930 aa
MAVQPKEKLSMDSGAESGFLSFYFSMPEKPETTVRVFDRSDYYTVHGSDATFAAKEVFKT
NGVIKYLGSGNKKLESVVLSKMNFESVVRDLLLVRQYRVEVYKNKSSSKTSNDWHLAFKA
SPGNLTQFEEILFGNNDMSSAVGVVGVRLVSSEGQRLVGVGYVDSTLRRLGVCEFPDNDQ
FSNLEALLVQIGPKECVMPGGDSAGDMAKLRQIVQRGGILITDRKKAEFTTKDSIQDLNR
LLKAKKGEQVNSAALPEMEKQVAMSSLSAVSKYLELLSDESNFGQFVMTCFDLTQYMKLD
NAAVGALNLFPGAAEDTSGTQSLAGLLNKCKTAQGQRLISQWIKQPLMDKNRIEERLNLV
EAFVTDVELRQSLQEDLLRRFPDFNRLAKKFQRQTANLQDCYRLYQAVNQLPNVVQTLEK
YEGSHQMLLLAVFVTPLTDLSADFYKFQEMIETTMDMDQVENHEFLVKASFDPNLTELRE
KMDELEKSMQASLNSAARELGLDAGKSIKLESNAQLGHYFRVTCKEEKALRNNKKFSTID
IQKNGLRFTNSKLSSYNEEYMRHREEYEEAQNAIVKEIINISAGYVDPIQTLNDVIAQLD
AIVSFAFVSNGAPVPYVRPIILEKGQGRIVLKSARHPCIEVQDDVAFIPNDITFEKEKQM
FHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEVSIVDCILARVGAGDSQLKGVS
TFMAEMLETASILRSATENSLIIIDELGRGTSTYDGFGLAWAISEYISTKIQAFCLFATH
FHELTALADQVPSVNNLHVTALTTDETLTMLYRVKKGVCDQSFGIHVAELANFPKHVIEN
AKAKALELEEFQFIGASTDSEDEPACKRRYLEKEEGEKIIQDFLAKVKALPLTEMSEQEI
KSRLNQLRADVLARNNGFVNEVICRTKAAC
NT seq 2793 nt   +upstreamnt  +downstreamnt
atggccgtccaaccgaaggagaagctgtctatggacagcggggcggagagcggcttcctc
agcttctacttctccatgccggaaaagccggagaccaccgtgcgggtgttcgacaggagc
gactactacacggtgcacggcagcgatgccacctttgccgccaaggaggtcttcaagacc
aacggggtcatcaaatacctgggatcagggaacaagaaattggaaagtgtggtactcagt
aaaatgaactttgagtctgttgtgagagatctgcttcttgttcgtcagtatcgggtggaa
gtttacaaaaataagtcttcaagcaaaacctccaatgactggcacctggcatttaaggcc
tctccaggaaacctgactcagtttgaagagatcttgttcggcaataatgacatgtcttct
gcggttggagttgttggtgtccgtctggtcagctctgaaggtcagagattggtcggcgtg
ggttatgtggattccactctgaggcggctgggagtatgtgaattcccggataacgatcag
ttctccaatctggaagccttgctggttcagatcgggcctaaagagtgtgtgatgcctgga
ggagacagtgccggagacatggcgaaattgagacagattgtccagagaggtgggattctg
atcacagacaggaagaaggcagagttcactacgaaggacagcatccaggatcttaaccgt
ttgttgaaagccaagaaaggagaacaagtcaatagtgctgcattaccagagatggagaag
caggttgcaatgtcttctctctcagccgtttcaaagtatctagagctgttgtcggatgaa
tccaactttggccagtttgtaatgacctgctttgacctgacccagtacatgaagctggat
aacgcagcggttggtgctttgaaccttttcccgggggcggctgaagacacaagtggcaca
cagtctttagctggcctattaaacaaatgcaaaactgcccaaggccaaagattgatcagt
cagtggatcaagcagccccttatggacaagaaccgaattgaagagagactgaacttggtg
gaggcgtttgtgaccgatgtggagctcaggcagagtcttcaggaagatcttctacgtcgt
tttccagattttaaccggctggcgaagaaattccagaggcagactgcaaacctgcaagat
tgctacaggctgtaccaggcggtgaaccagctgcccaatgtggtacagaccctggagaaa
tatgaagggtctcaccagatgctcctgctggccgtgtttgttactcctctcactgatctt
tctgctgacttctacaaatttcaggaaatgattgaaaccactatggacatggatcaggta
gaaaaccatgagtttttggtaaaggcgtcctttgatccaaacttgacggaactaagagag
aagatggatgaactggagaagagcatgcaggcgtctcttaacagtgcggccagagagttg
ggcttggatgctggaaaaagtattaaactagagtccaatgctcaacttggtcactatttc
cgtgtgacctgcaaggaagaaaaggctctgaggaacaataagaagttctccaccattgac
atccaaaaaaatggactgagattcaccaacagcaagctgagctcctataatgaagaatac
atgaggcacagagaggagtatgaagaggctcagaacgccattgtgaaagaaatcatcaac
atctctgctggttatgtggatccaattcagacactgaacgatgtaatagctcagctagat
gccattgtcagctttgcttttgtttctaatggagcgccagtaccatatgttcgtcctatc
atcctggagaagggacagggacgtatagtgctgaaatctgccagacacccgtgtattgaa
gtgcaggatgatgtggcattcattcccaatgacataacgttcgagaaggagaaacagatg
ttccatattatcactggtcctaatatgggtggaaaatccacctatattcgccagactgga
gtaatagtccttatggcccagattggctgctttgtaccgtgtgactctgcggaggtgagc
attgtggattgcattcttgctcgagtcggagctggggacagtcagctcaaaggagtgtca
accttcatggctgagatgttggagacggcttcaatcctcagatcagcaaccgagaactct
ctgatcatcattgacgagctgggcagaggcacctccacctatgacggttttggcctggcc
tgggcaatctctgagtacatctctactaaaatccaggccttttgtttgtttgccactcac
ttccatgaactaaccgctctggctgatcaggtgccaagtgtgaacaatttacatgtcaca
gcgcttacaacagatgagacgctgaccatgctctaccgagtcaagaaaggtgtctgcgat
cagagctttggaatacatgtagcggagctggctaactttccgaagcacgtaatcgaaaac
gccaaagcaaaagcattagagttggaggaattccagttcattggggcttcaacagactct
gaggatgaaccagcctgcaagaggcgctacctagaaaaagaggaaggagagaagataatt
caggattttctcgccaaagtgaaagctcttccacttactgaaatgtctgagcaggaaata
aaaagcagactgaatcagctgagggctgatgttctagccaggaataatggcttcgtcaat
gaagttatctgccgcacaaaagctgcatgctga

DBGET integrated database retrieval system