Rana temporaria (common frog): 120938012
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Entry
120938012 CDS
T07929
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120938012 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtem04812
]
120938012 (SPTBN1)
Cytoskeleton proteins [BR:
rtem04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120938012 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
120938012 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
ERCC4
Motif
Other DBs
NCBI-GeneID:
120938012
NCBI-ProteinID:
XP_040207579
LinkDB
All DBs
Position
4:459850135..460146717
Genome browser
AA seq
2425 aa
AA seq
DB search
MTTAITTDYDHIEIQQQYSDVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYGDLRDGRMLIKLLEVLSGEKLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLENAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAV
VAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRLRLEMNLGLQKVFQEMLYIM
DWMDEMKVLLLSQDYGKHLLGVEDLLQKNALVEADISIQAERVRAVNASAQRFAAGGEGY
KPCDPQIIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSDDYGKDLTSVIRLLSKHKAFEDEMSGRSGHLLQTIKEGEEMIAEEHFGSEKIRERIKD
IQEQWANLEQLSAIRKKHLEETSSFHQFQADADDIDAWMLDILKIVSSNDVGHDEFSTQS
LVKKHKDVAEEIGSYRCTIDALHEEAAALPQEQFESNEVQIRLSGIEERYKELAELTRLR
KQALQDALTLYKMFSEADACELWIVEKEQWLNHLQIPEKLEDLEVVQHRFESLEPEMNNQ
ASRVAVVNQIARQLIHSGHPSETEIKAQQEKLNTRWGQFRELVDKTKDALSSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLGGVMALQRKLTGMERDLAAIEAKLTDLQKEAEK
LEAEHPDQAQAIMSRLAEINEVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLAEAEKLLAQHENIKNEIHNYEEDYQKMRDMGEMVTQGQTDAQYMFLH
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPNTL
EAAEAAIKKQEDFMTTMDASEEKINAVVDTGRRLVKDGNINSDRIEEKVDSIDSRHQRNR
EAANDLLTRLKDNREMQKFLQDSQELSLWINEKMLTARDMSYDEARNLHSKWLKHQAFMA
ELASNKEWLDKIEKEGNQLIAEKPETEAIVKEKMTGLHEMWEELETTTQTKAQRLFDANK
AELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEVEELQS
QAQALSQEGQSPDEVDGQRIVVEKRFVELMAPLTERKKYLLASKEIHQFNRDVEDEILWV
EERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQHRNDDIFERSQMILEDGSLNPEA
MQKRLSDLQTLWNLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADGHPESERISMRQSQVDKLYAG
LKDLSEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGHIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRIQDKHKKIPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDATRLQAAYAGDKADDIQKRESEVLEAWKTLLDACEGRRVRLVDTGDKFRFFSMVRD
LMLWMDDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YATEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLYGQEPYLSS
REIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRMQEEEERKRKPPT
PELSPKVSEEESPQQWDGKEEQISQNGLPSDQDSPRITQLSSVGLYSDGVQTGEPVHEIG
PEEPQSTQMITLLSSVGLYSDGVQTGEPVHEIVPGEPQSTQLMGENAETNEMVNGSTEQR
TSSKESSPIPSPTADRKSKSGMQAQTAATLPAKTQDMPSAQFEGVLHRKHEWETHNKKAS
NRSWHNVYCVINNQEIGFYKDAKTAASGIPYHNEVPVNLKEALCEVATDYKKKKHVFKLK
LNDGNEYLCQAKDDEEMNTWIQAITNAVTSDKTEVSLSTQSTPASSRAQTLPASVTVTTE
SSPGKREKDKEKDKEKRFSLFGKKK
NT seq
7278 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggctatcacgaccgattatgatcacattgagatccaacagcagtacagcgac
gtcaacaatcgctgggacgatgaatgggacaacgagaacagctctgcgagactcttcgag
cgttcccgtatcaaggccttagcagatgaacgtgaggctgtccagaagaagactttcaca
aaatgggtcaattcccacctggcccgcgtgtcctgcagaattaccgacctgtacggagac
ctgcgagatggaaggatgctcatcaaactgctggaagttctctctggagagaaacttccc
aagcccaccaagggaagaatgcggatccattgtctggagaatgttgacaaagcgctgcag
tttctgaaagaacaaagggttcacctggaaaacatgggctcccatgatattgtcgatgga
aaccacagactgactcttggtttgatttggaccatcatcctcagattccagatccaagat
attagtgtggagaccgaagacaacaaggagaagaaatctgcaaaggatgctttgctttta
tggtgccagatgaagacagctgggtatcccaatgtgaatatacataattttacaaccagc
tggagggacggcatggccttcaacgcactcattcataaacacagacccgacttgattgat
tttgataagctgaagaagtcaaacgcacactacaatctgcaaaatgccttcaaccttgca
gagcagcacttaggcctcactaaactcctcgacccagaagacatcagcgttgaccatcca
gatgaaaagtccatcattacttatgttgtcacatattaccattacttctcaaagatgaag
gcactggccgtggaaggaaaacgtattggaaaagttcttgaaaatgccatcgaaaccgag
aaaatgattgagaagtatgaatccctggcttctgacctcctcgagtggattgaacaaacc
attatcatcctaaacaatcggaaattcgccaactcactggtcggtgtgcagcagcagctt
caagctttcaacacctaccgcactgtggaaaaaccaccaaaatttacagaaaaaggaaac
ttggaagtgttgctctttaccattcagagtaagatgagggccaacaatcaaaaggtatac
atgccaagagagggcaagctcatctcagatattaataaggcctgggaacgactggaaaaa
gccgaacacgagagagaactggcactgcgaaatgagctgatccgacaggaaaaactggaa
caacttgcacgcagatttgatcgcaaggcagctatgagagagacttggctgagtgaaaac
cagcgcctggtgtctcaggataacttcggctttgaccttcctgctgtagaagccgccaca
aagaaacacgaagcaatcgaaacggacattgcagcctatgaagagcgtgttcaggctgtg
gtggcagtggcacgagaactggaagctgaaaactaccatgacataaaacgaatcacggcc
cgaaaggacaatgtcatccggctctgggaatacctactggagctgctgcgggcgcggcga
ctgcgcctagaaatgaaccttggactgcagaaggttttccaagagatgctttacattatg
gactggatggacgaaatgaaggtgcttctgttgtctcaggattatgggaaacacttgctg
ggagtggaggacttgttacagaagaatgctctggtggaggctgacatttccatccaggca
gagagagtacgtgccgttaatgcatcagctcagagatttgctgcaggaggggaaggttac
aagccgtgtgatccacagatcatccgggaccgtgttgcccacatggaattctgctatcag
gaactgtgtcaactggcggctgaaagacgtgcacgtttggaagagtctaggcggctttgg
aagtttttctgggagatggcggaagaggaaggttggattagagaaaaagagcagatcctg
tcatccgatgactatgggaaggatctgaccagtgttatccgtcttctgtccaaacacaag
gcttttgaagatgaaatgagcgggcgaagcggtcacttactccagaccatcaaggaagga
gaggagatgattgcagaggagcactttggatctgagaagatcagggaacggatcaaggat
attcaggagcaatgggctaaccttgaacagctgtcagccattcgcaagaaacacctggaa
gaaacctcaagtttccaccagttccaggcagatgccgatgatattgatgcctggatgttg
gacatcttgaagatcgtgtccagtaatgatgttggacatgatgaattttctactcagtct
ctagtgaagaaacacaaagatgtagctgaagaaattggaagttacagatgtactattgat
gctctacatgaagaagccgctgcccttccccaggaacagtttgaatcgaatgaagtgcag
atcaggttgtcgggaatcgaggaaagatacaaggaactggctgagctgacgcgacttcgg
aaacaggcgttgcaggacgccctcacgctctacaaaatgtttagcgaagctgacgcctgt
gaactttggattgttgagaaggagcagtggttgaaccatctgcaaatccctgagaagcta
gaagacctggaggttgttcagcatagatttgaaagtctagagccagaaatgaacaaccag
gcatcacgagtggctgtcgttaatcagattgcccgtcagttgatccacagtggacatccg
agcgagactgaaatcaaagcacagcaagagaaactgaacacaaggtggggccagtttaga
gaattggttgacaagacaaaagatgccctcagttcagcactaagtattcagaactaccat
cttgagtgcaatgagaccaagtcctggattagggaaaagaccaaagtcatcgagtcaact
caagacctgggcaacgaccttggtggagtcatggcactccaacgcaagttgaccggtatg
gaacgtgacttggctgccattgaggccaaacttaccgatctgcaaaaagaagctgagaaa
ctggaagctgaacatcccgaccaagctcaggctatcatgagcaggcttgcagagatcaat
gaagtatgggaagaaatgaagaccaccctgaagaatcgagaagagtctcttggtgaagcc
agcaaacttcaacaattcctccgtgacttggatgattttcagtcctggttatcaaggaca
cagacggccattgcttccgaggacatgccaaatacgttggcagaagcagagaagctgctt
gctcaacacgaaaacattaaaaatgaaatccacaactatgaagaggattaccagaagatg
agggacatgggtgagatggtgacacaggggcagaccgatgcacagtacatgttcttgcat
caacgtcttcaggctcttgacactggctggaacgagcttcacaaaatgtgggagaacagg
cagaaccttttatctcagtcccatgcctaccagctcttcctaagagacaccaagcaagca
gaagcttttcttaataaccaggaatatgtcttggcacacactgaaatgcccaataccttg
gaagcggctgaagccgccataaagaaacaagaagactttatgaccacgatggatgccagt
gaagagaagattaatgcagttgtggataccggcagaagactagtcaaggacggcaacatc
aactctgatagaatcgaagaaaaagttgattctattgacagcaggcatcaaagaaatcga
gaggccgcaaatgatcttttgactcgactgaaggacaacagagagatgcagaagtttctg
caggattctcaagagctgtccctctggattaatgagaaaatgctcacggctcgggatatg
tcgtatgatgaggccaggaacttgcacagtaaatggctgaagcaccaagcttttatggca
gaactggcatccaacaaggaatggctggacaaaatcgagaaggaaggaaaccaattgatt
gcggaaaagccagagacggaggccatagtgaaggagaagatgacaggcctgcatgaaatg
tgggaagagctggaaaccacaacacagacaaaggcccagagacttttcgatgccaacaaa
gctgagctgttcacccagagctgtgcagatctggacaagtggcttcatggactggagagt
cagattcagtctgatgactatggcaaggatctcaccagtgtcaacatcctgctgaagaag
cagcagatgctggaaaatcaaatggacgtgcgcaagaaggaggtggaagagctgcagagc
caggctcaggccctgagtcaggaggggcagagtccagatgaggttgacggtcagcgtata
gttgtggagaagaggttcgtggaactaatggccccgctaaccgagaggaaaaaatatctc
ttggcttctaaagaaattcaccagttcaaccgagatgtggaagatgagattctatgggtt
gaagagcgaatgcctcttgcaacatcaactgaccacggacacaacctccagaccgtgcaa
ctactgatcaagaaaaatcagacacttcagaaggagatccaaggccaccaacaccgcaac
gatgatatctttgagaggagccaaatgattttggaagatggcagtcttaatcctgaagcc
atgcagaaacgactgtcagaccttcagacgctatggaacctcctcatcgaggagacggag
aagaggcacaggaggctggaggaagcccacaaagctcagcagtattatttcgatgctgca
gaggccgaggcctggatgagcgagcaagaactttacatgatgtcggaagagaaagccaag
gatgagcagagcgccgtgtctatgctgaagaagcaccagattttggagcaggcagtggag
gactacgcagagaccgtacatcagctttccaagacgagtcgggcattggtggcagatgga
catcctgagagcgagcgcatcagcatgcgtcagtcgcaagtggacaaactgtatgcgggt
ctgaaagatttgtcggaggagaggagaggaaaactggatgaaaggcacaggctgttccaa
ctcaaccgggaggtggatgacctggagcaatggattgccgagagggaggttgtagctggt
tcccatgagctcggacaggactatgaacatgttacaatgttgcaagagcgattcagagag
tttgcacgtgatactgggcacattggacaggagagggtggacactgttaatcacatggcc
gatgaccttattaattctggacattccgatgccgctactatagcagaatggaaggatggc
ctgaacgaggcctgggcagatctccttgagttgatcgacaccagaacgcagatactggct
gcctcatacgaactgcacaaattctatcatgatgctaaagagatcctcgggcgcatacag
gataagcataagaagattccagaggagctgggaagagatcagaacacggttgaaacacta
caaaggatgcacaccacatttgagcatgacatccaggcactgggcacacaggtgaggcag
cttcaggaggacgctacacggttgcaggctgcttatgcaggagacaaggccgatgacatt
cagaagagggagagcgaagtcctggaggcctggaaaacattgctggatgcctgtgaaggc
aggcgggtccgactggtggacaccggagacaaattccgattcttcagtatggtccgtgac
ctcatgctctggatggatgatgtcatccgacagatcgaagcccaagagaagccaagggat
gtttcttcagtagaactgctcatgaataatcaccagggcattaaagcagaaattgatgcc
cggaatgacagctttacgacctgcattgagctgggcaagtctctgctggcgaggaagcac
tatgcaacagaagagataaaagaaaaattgttacaactgactgagaagagaaaagaaatg
attgacaagtgggaggaccgatgggaatggctgagactgattctggaggtgcaccagttt
tcccgggacgccagtgtcgccgaggcctggttgtatggacaggagccatacctgtcaagt
cgtgaaataggccagagcgtagacgaagtggaaaaactcatcaagaggcacgaggcattt
gagaaatcggcagctacttgggatgaaaggttttcagccttggaaagacttacaacgctg
gaattattggaagtccgtcgaatgcaagaggaagaggaaaggaagcgtaagcctcccaca
cctgaattgagcccgaaagtgtcagaagaagaatcgccacagcaatgggatggaaaagaa
gaacagatttctcagaatggattaccatctgaccaagattctccacggataacacagttg
agtagtgttggtttgtattctgatggtgtccaaacaggagaacctgtacatgagattgga
cctgaagagccgcagtccactcaaatgataacactgttgagtagtgttggtttgtattct
gatggtgtacaaacaggagaacctgtacatgagattgtccctggagagccgcagtccact
cagttgatgggtgaaaacgctgaaaccaatgaaatggtcaatggatccacagaacagaga
acaagttcgaaagaatccagcccgattccatcaccaactgctgaccgcaagtcaaaatca
ggaatgcaggcgcagactgccgccacattacccgccaagacgcaggacatgccttctgct
cagtttgaaggcgtcctacatcgtaaacatgaatgggaaacgcacaacaagaaagcctca
aacaggtcttggcataatgtatactgtgtgataaacaatcaagaaattggattttacaaa
gacgccaaaactgcagcttccggtattccctatcacaacgaggtcccggtgaacctgaag
gaagccctctgtgaagtagcaactgattacaagaagaaaaagcatgtattcaagctcaaa
ctgaatgacggtaatgagtacctctgccaagccaaagatgatgaggagatgaacacatgg
atccaggccatcacaaacgcagtcacgtcagacaaaaccgaggtgtccctgagcacacag
agcactccagcatccagccgcgcccaaaccttgccagccagcgtcaccgtcaccaccgag
tccagccccggcaagcgggagaaagacaaagagaaggacaaggagaaaagattcagcctg
tttggaaaaaagaagtga
DBGET
integrated database retrieval system
