Rana temporaria (common frog): 120938012
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Entry
120938012 CDS
T07929
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04517
IgSF CAM signaling
rtem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120938012 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120938012 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtem04812
]
120938012 (SPTBN1)
Cytoskeleton proteins [BR:
rtem04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120938012 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
120938012 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
120938012
NCBI-ProteinID:
XP_040207579
LinkDB
All DBs
Position
4:459850135..460146717
Genome browser
AA seq
2425 aa
AA seq
DB search
MTTAITTDYDHIEIQQQYSDVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYGDLRDGRMLIKLLEVLSGEKLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLENAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAV
VAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRLRLEMNLGLQKVFQEMLYIM
DWMDEMKVLLLSQDYGKHLLGVEDLLQKNALVEADISIQAERVRAVNASAQRFAAGGEGY
KPCDPQIIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSDDYGKDLTSVIRLLSKHKAFEDEMSGRSGHLLQTIKEGEEMIAEEHFGSEKIRERIKD
IQEQWANLEQLSAIRKKHLEETSSFHQFQADADDIDAWMLDILKIVSSNDVGHDEFSTQS
LVKKHKDVAEEIGSYRCTIDALHEEAAALPQEQFESNEVQIRLSGIEERYKELAELTRLR
KQALQDALTLYKMFSEADACELWIVEKEQWLNHLQIPEKLEDLEVVQHRFESLEPEMNNQ
ASRVAVVNQIARQLIHSGHPSETEIKAQQEKLNTRWGQFRELVDKTKDALSSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLGGVMALQRKLTGMERDLAAIEAKLTDLQKEAEK
LEAEHPDQAQAIMSRLAEINEVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLAEAEKLLAQHENIKNEIHNYEEDYQKMRDMGEMVTQGQTDAQYMFLH
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPNTL
EAAEAAIKKQEDFMTTMDASEEKINAVVDTGRRLVKDGNINSDRIEEKVDSIDSRHQRNR
EAANDLLTRLKDNREMQKFLQDSQELSLWINEKMLTARDMSYDEARNLHSKWLKHQAFMA
ELASNKEWLDKIEKEGNQLIAEKPETEAIVKEKMTGLHEMWEELETTTQTKAQRLFDANK
AELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEVEELQS
QAQALSQEGQSPDEVDGQRIVVEKRFVELMAPLTERKKYLLASKEIHQFNRDVEDEILWV
EERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQHRNDDIFERSQMILEDGSLNPEA
MQKRLSDLQTLWNLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADGHPESERISMRQSQVDKLYAG
LKDLSEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGHIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRIQDKHKKIPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDATRLQAAYAGDKADDIQKRESEVLEAWKTLLDACEGRRVRLVDTGDKFRFFSMVRD
LMLWMDDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YATEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLYGQEPYLSS
REIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRMQEEEERKRKPPT
PELSPKVSEEESPQQWDGKEEQISQNGLPSDQDSPRITQLSSVGLYSDGVQTGEPVHEIG
PEEPQSTQMITLLSSVGLYSDGVQTGEPVHEIVPGEPQSTQLMGENAETNEMVNGSTEQR
TSSKESSPIPSPTADRKSKSGMQAQTAATLPAKTQDMPSAQFEGVLHRKHEWETHNKKAS
NRSWHNVYCVINNQEIGFYKDAKTAASGIPYHNEVPVNLKEALCEVATDYKKKKHVFKLK
LNDGNEYLCQAKDDEEMNTWIQAITNAVTSDKTEVSLSTQSTPASSRAQTLPASVTVTTE
SSPGKREKDKEKDKEKRFSLFGKKK
NT seq
7278 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggctatcacgaccgattatgatcacattgagatccaacagcagtacagcgac
gtcaacaatcgctgggacgatgaatgggacaacgagaacagctctgcgagactcttcgag
cgttcccgtatcaaggccttagcagatgaacgtgaggctgtccagaagaagactttcaca
aaatgggtcaattcccacctggcccgcgtgtcctgcagaattaccgacctgtacggagac
ctgcgagatggaaggatgctcatcaaactgctggaagttctctctggagagaaacttccc
aagcccaccaagggaagaatgcggatccattgtctggagaatgttgacaaagcgctgcag
tttctgaaagaacaaagggttcacctggaaaacatgggctcccatgatattgtcgatgga
aaccacagactgactcttggtttgatttggaccatcatcctcagattccagatccaagat
attagtgtggagaccgaagacaacaaggagaagaaatctgcaaaggatgctttgctttta
tggtgccagatgaagacagctgggtatcccaatgtgaatatacataattttacaaccagc
tggagggacggcatggccttcaacgcactcattcataaacacagacccgacttgattgat
tttgataagctgaagaagtcaaacgcacactacaatctgcaaaatgccttcaaccttgca
gagcagcacttaggcctcactaaactcctcgacccagaagacatcagcgttgaccatcca
gatgaaaagtccatcattacttatgttgtcacatattaccattacttctcaaagatgaag
gcactggccgtggaaggaaaacgtattggaaaagttcttgaaaatgccatcgaaaccgag
aaaatgattgagaagtatgaatccctggcttctgacctcctcgagtggattgaacaaacc
attatcatcctaaacaatcggaaattcgccaactcactggtcggtgtgcagcagcagctt
caagctttcaacacctaccgcactgtggaaaaaccaccaaaatttacagaaaaaggaaac
ttggaagtgttgctctttaccattcagagtaagatgagggccaacaatcaaaaggtatac
atgccaagagagggcaagctcatctcagatattaataaggcctgggaacgactggaaaaa
gccgaacacgagagagaactggcactgcgaaatgagctgatccgacaggaaaaactggaa
caacttgcacgcagatttgatcgcaaggcagctatgagagagacttggctgagtgaaaac
cagcgcctggtgtctcaggataacttcggctttgaccttcctgctgtagaagccgccaca
aagaaacacgaagcaatcgaaacggacattgcagcctatgaagagcgtgttcaggctgtg
gtggcagtggcacgagaactggaagctgaaaactaccatgacataaaacgaatcacggcc
cgaaaggacaatgtcatccggctctgggaatacctactggagctgctgcgggcgcggcga
ctgcgcctagaaatgaaccttggactgcagaaggttttccaagagatgctttacattatg
gactggatggacgaaatgaaggtgcttctgttgtctcaggattatgggaaacacttgctg
ggagtggaggacttgttacagaagaatgctctggtggaggctgacatttccatccaggca
gagagagtacgtgccgttaatgcatcagctcagagatttgctgcaggaggggaaggttac
aagccgtgtgatccacagatcatccgggaccgtgttgcccacatggaattctgctatcag
gaactgtgtcaactggcggctgaaagacgtgcacgtttggaagagtctaggcggctttgg
aagtttttctgggagatggcggaagaggaaggttggattagagaaaaagagcagatcctg
tcatccgatgactatgggaaggatctgaccagtgttatccgtcttctgtccaaacacaag
gcttttgaagatgaaatgagcgggcgaagcggtcacttactccagaccatcaaggaagga
gaggagatgattgcagaggagcactttggatctgagaagatcagggaacggatcaaggat
attcaggagcaatgggctaaccttgaacagctgtcagccattcgcaagaaacacctggaa
gaaacctcaagtttccaccagttccaggcagatgccgatgatattgatgcctggatgttg
gacatcttgaagatcgtgtccagtaatgatgttggacatgatgaattttctactcagtct
ctagtgaagaaacacaaagatgtagctgaagaaattggaagttacagatgtactattgat
gctctacatgaagaagccgctgcccttccccaggaacagtttgaatcgaatgaagtgcag
atcaggttgtcgggaatcgaggaaagatacaaggaactggctgagctgacgcgacttcgg
aaacaggcgttgcaggacgccctcacgctctacaaaatgtttagcgaagctgacgcctgt
gaactttggattgttgagaaggagcagtggttgaaccatctgcaaatccctgagaagcta
gaagacctggaggttgttcagcatagatttgaaagtctagagccagaaatgaacaaccag
gcatcacgagtggctgtcgttaatcagattgcccgtcagttgatccacagtggacatccg
agcgagactgaaatcaaagcacagcaagagaaactgaacacaaggtggggccagtttaga
gaattggttgacaagacaaaagatgccctcagttcagcactaagtattcagaactaccat
cttgagtgcaatgagaccaagtcctggattagggaaaagaccaaagtcatcgagtcaact
caagacctgggcaacgaccttggtggagtcatggcactccaacgcaagttgaccggtatg
gaacgtgacttggctgccattgaggccaaacttaccgatctgcaaaaagaagctgagaaa
ctggaagctgaacatcccgaccaagctcaggctatcatgagcaggcttgcagagatcaat
gaagtatgggaagaaatgaagaccaccctgaagaatcgagaagagtctcttggtgaagcc
agcaaacttcaacaattcctccgtgacttggatgattttcagtcctggttatcaaggaca
cagacggccattgcttccgaggacatgccaaatacgttggcagaagcagagaagctgctt
gctcaacacgaaaacattaaaaatgaaatccacaactatgaagaggattaccagaagatg
agggacatgggtgagatggtgacacaggggcagaccgatgcacagtacatgttcttgcat
caacgtcttcaggctcttgacactggctggaacgagcttcacaaaatgtgggagaacagg
cagaaccttttatctcagtcccatgcctaccagctcttcctaagagacaccaagcaagca
gaagcttttcttaataaccaggaatatgtcttggcacacactgaaatgcccaataccttg
gaagcggctgaagccgccataaagaaacaagaagactttatgaccacgatggatgccagt
gaagagaagattaatgcagttgtggataccggcagaagactagtcaaggacggcaacatc
aactctgatagaatcgaagaaaaagttgattctattgacagcaggcatcaaagaaatcga
gaggccgcaaatgatcttttgactcgactgaaggacaacagagagatgcagaagtttctg
caggattctcaagagctgtccctctggattaatgagaaaatgctcacggctcgggatatg
tcgtatgatgaggccaggaacttgcacagtaaatggctgaagcaccaagcttttatggca
gaactggcatccaacaaggaatggctggacaaaatcgagaaggaaggaaaccaattgatt
gcggaaaagccagagacggaggccatagtgaaggagaagatgacaggcctgcatgaaatg
tgggaagagctggaaaccacaacacagacaaaggcccagagacttttcgatgccaacaaa
gctgagctgttcacccagagctgtgcagatctggacaagtggcttcatggactggagagt
cagattcagtctgatgactatggcaaggatctcaccagtgtcaacatcctgctgaagaag
cagcagatgctggaaaatcaaatggacgtgcgcaagaaggaggtggaagagctgcagagc
caggctcaggccctgagtcaggaggggcagagtccagatgaggttgacggtcagcgtata
gttgtggagaagaggttcgtggaactaatggccccgctaaccgagaggaaaaaatatctc
ttggcttctaaagaaattcaccagttcaaccgagatgtggaagatgagattctatgggtt
gaagagcgaatgcctcttgcaacatcaactgaccacggacacaacctccagaccgtgcaa
ctactgatcaagaaaaatcagacacttcagaaggagatccaaggccaccaacaccgcaac
gatgatatctttgagaggagccaaatgattttggaagatggcagtcttaatcctgaagcc
atgcagaaacgactgtcagaccttcagacgctatggaacctcctcatcgaggagacggag
aagaggcacaggaggctggaggaagcccacaaagctcagcagtattatttcgatgctgca
gaggccgaggcctggatgagcgagcaagaactttacatgatgtcggaagagaaagccaag
gatgagcagagcgccgtgtctatgctgaagaagcaccagattttggagcaggcagtggag
gactacgcagagaccgtacatcagctttccaagacgagtcgggcattggtggcagatgga
catcctgagagcgagcgcatcagcatgcgtcagtcgcaagtggacaaactgtatgcgggt
ctgaaagatttgtcggaggagaggagaggaaaactggatgaaaggcacaggctgttccaa
ctcaaccgggaggtggatgacctggagcaatggattgccgagagggaggttgtagctggt
tcccatgagctcggacaggactatgaacatgttacaatgttgcaagagcgattcagagag
tttgcacgtgatactgggcacattggacaggagagggtggacactgttaatcacatggcc
gatgaccttattaattctggacattccgatgccgctactatagcagaatggaaggatggc
ctgaacgaggcctgggcagatctccttgagttgatcgacaccagaacgcagatactggct
gcctcatacgaactgcacaaattctatcatgatgctaaagagatcctcgggcgcatacag
gataagcataagaagattccagaggagctgggaagagatcagaacacggttgaaacacta
caaaggatgcacaccacatttgagcatgacatccaggcactgggcacacaggtgaggcag
cttcaggaggacgctacacggttgcaggctgcttatgcaggagacaaggccgatgacatt
cagaagagggagagcgaagtcctggaggcctggaaaacattgctggatgcctgtgaaggc
aggcgggtccgactggtggacaccggagacaaattccgattcttcagtatggtccgtgac
ctcatgctctggatggatgatgtcatccgacagatcgaagcccaagagaagccaagggat
gtttcttcagtagaactgctcatgaataatcaccagggcattaaagcagaaattgatgcc
cggaatgacagctttacgacctgcattgagctgggcaagtctctgctggcgaggaagcac
tatgcaacagaagagataaaagaaaaattgttacaactgactgagaagagaaaagaaatg
attgacaagtgggaggaccgatgggaatggctgagactgattctggaggtgcaccagttt
tcccgggacgccagtgtcgccgaggcctggttgtatggacaggagccatacctgtcaagt
cgtgaaataggccagagcgtagacgaagtggaaaaactcatcaagaggcacgaggcattt
gagaaatcggcagctacttgggatgaaaggttttcagccttggaaagacttacaacgctg
gaattattggaagtccgtcgaatgcaagaggaagaggaaaggaagcgtaagcctcccaca
cctgaattgagcccgaaagtgtcagaagaagaatcgccacagcaatgggatggaaaagaa
gaacagatttctcagaatggattaccatctgaccaagattctccacggataacacagttg
agtagtgttggtttgtattctgatggtgtccaaacaggagaacctgtacatgagattgga
cctgaagagccgcagtccactcaaatgataacactgttgagtagtgttggtttgtattct
gatggtgtacaaacaggagaacctgtacatgagattgtccctggagagccgcagtccact
cagttgatgggtgaaaacgctgaaaccaatgaaatggtcaatggatccacagaacagaga
acaagttcgaaagaatccagcccgattccatcaccaactgctgaccgcaagtcaaaatca
ggaatgcaggcgcagactgccgccacattacccgccaagacgcaggacatgccttctgct
cagtttgaaggcgtcctacatcgtaaacatgaatgggaaacgcacaacaagaaagcctca
aacaggtcttggcataatgtatactgtgtgataaacaatcaagaaattggattttacaaa
gacgccaaaactgcagcttccggtattccctatcacaacgaggtcccggtgaacctgaag
gaagccctctgtgaagtagcaactgattacaagaagaaaaagcatgtattcaagctcaaa
ctgaatgacggtaatgagtacctctgccaagccaaagatgatgaggagatgaacacatgg
atccaggccatcacaaacgcagtcacgtcagacaaaaccgaggtgtccctgagcacacag
agcactccagcatccagccgcgcccaaaccttgccagccagcgtcaccgtcaccaccgag
tccagccccggcaagcgggagaaagacaaagagaaggacaaggagaaaagattcagcctg
tttggaaaaaagaagtga
DBGET
integrated database retrieval system
