KEGG   Rana temporaria (common frog): 120938313
Entry
120938313         CDS       T07929                                 
Symbol
USP30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
  KO
K11851  ubiquitin carboxyl-terminal hydrolase 30 [EC:3.4.19.12]
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    120938313 (USP30)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rtem01002]
    120938313 (USP30)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtem04131]
    120938313 (USP30)
   04121 Ubiquitin system [BR:rtem04121]
    120938313 (USP30)
Enzymes [BR:rtem01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     120938313 (USP30)
Peptidases and inhibitors [BR:rtem01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   120938313 (USP30)
Membrane trafficking [BR:rtem04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    120938313 (USP30)
Ubiquitin system [BR:rtem04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    120938313 (USP30)
SSDB
Motif
Pfam: UCH UCH_1 DUF5700
Other DBs
NCBI-GeneID: 120938313
NCBI-ProteinID: XP_040207814
LinkDB
Position
1:complement(234998847..235036193)
AA seq 501 aa
MLRGSVRASEPTIGVSLRRGAGTRCKMMKNWGMIGGFAAALAAGIYVLWGPITDRKKHKK
GLVPGLLNLGNTCFMNSLLQGLSACPSFIRWLEAFTSQYQLEQQDTAPRNLSGTLLQLLK
ALSNQEAAEEEVVDASPLLDVLRTYRWQISSFEEQDAHELFHVLTSSLEEERDRHPHVPH
LFDIHALEVTQVCEQQIHCRTEGVINPIPRHWKTHHPFHGRLTSNMICKNCQHQSPMRYD
TFDSLSLSIPSGAWGRTLTLDHCLQHFISTESVKDVVCENCTKLQAQERPNGQLLEDQKT
TFVKQLKLGKLPQCLCIHLQRLSWSNQGSPLKRNEHVQFSEFLALDRYKYRLARNSLSQH
QGRTCSRTVPPTTDGSAVSDGLHNSKIKLLNGTYSTSLLSSSYSNSKSSPAECTSSSYLF
RLMAVIVHHGDMHSGHFVTYRRSPPAAKSQKHSSQQWLWISDDTVRRANIQEVLSSCAYL
LFYERAFSKSCNLGRETRAEE
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgctcagaggttcagtccgggcctcggaaccgacaatcggcgtgtcattacgcagagga
gccggaaccaggtgtaaaatgatgaagaactggggtatgattggtggctttgctgcagcc
cttgcagctggaatatatgtcttgtggggtccaatcacagacagaaagaaacacaaaaaa
ggactggtgccagggttactaaatttggggaacacttgtttcatgaattccttgctgcaa
ggtttgtctgcctgtccttcatttattcgttggcttgaggcgtttacttctcagtaccag
cttgaacagcaagacacagcgcctcgaaatctgtctggtactttgctacagcttttaaaa
gctttatctaaccaggaggctgcagaagaagaggtggtagatgccagtcctctccttgat
gttctccggacatacaggtggcaaatttcttctttcgaagagcaggatgcacatgaatta
tttcatgtgttgacatcatcattagaagaagagagagatcgtcatccccatgtaccacac
ctctttgacattcatgctttggaggtcacccaggtttgcgaacagcagattcactgcaga
acagaaggagtgataaaccctatccctagacattggaaaactcaccacccttttcatgga
agattgactagtaacatgatttgcaagaactgtcagcatcagagtcctatgcgatatgac
acctttgacagcctgtcgttgagtataccttcaggtgcatggggtcgcactttgacactt
gaccattgcctacaacacttcatctccacagagagtgttaaggatgttgtctgtgaaaac
tgtaccaaactacaagctcaggagaggccgaatgggcagctattggaagatcagaaaact
acttttgttaaacagttaaaattaggaaagcttcctcagtgtttgtgcatccacttgcag
cgtctgagctggtctaatcagggtagcccactaaaacgaaatgaacacgtccagtttagc
gagtttctggctttggacagatataagtatcgacttgctagaaactccctctctcagcat
caaggcagaacttgcagcagaacagttccaccaacaacagatggatcagcagtttctgat
ggtcttcataattccaagattaagttgttgaatggaacgtattctacttcactattgtcg
tcttcatattcaaactcaaagtcttctccagcagagtgcacttcttcctcatatctcttt
cgtctgatggcagtcattgttcatcatggtgacatgcattcgggacattttgttacctat
cgacgatcccctcctgcagccaagagccaaaagcattctagccagcagtggttgtggatt
tcagatgacacagtgcgaagagctaacatacaggaagttctctcgtcttgtgcttatttg
ctgttctatgaacgtgcattttctaaatcctgtaatctaggacgtgaaacaagagcagag
gaatga

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