Rana temporaria (common frog): 120938981
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Entry
120938981 CDS
T07929
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtem03009
]
120938981 (DDX54)
Enzymes [BR:
rtem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120938981 (DDX54)
Ribosome biogenesis [BR:
rtem03009
]
Eukaryotic type
Pre-60S particles
Helicases
120938981 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
KH_SLS1_1
Motif
Other DBs
NCBI-GeneID:
120938981
NCBI-ProteinID:
XP_040207856
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All DBs
Position
1:239062073..239092197
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AA seq
850 aa
AA seq
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MAQKKKKGHRARKPAKDQEGEGSDTGEFDVTTGVPEQDEVRLPSFPTADGGSDTELDTRQ
LVRAQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKVVPVILDGKDVVAMARTG
SGKTACFLIPMFEKLKAHVAQTGVRGLILSPTRELALQTLKFTKELGKFTGLKTALILGG
DKMEDQFAALHENPDIIIATPGRLMHVSVEMNLKLRSVEYVVFDEADRLFEMGFAEQLQE
IIARLPETRQTLLFSATLPKMLLEFARAGLTEPVLIRLDVDTKLSDQLKLAFFHVRAEDK
PAVLLHLLRCIVKPQEQTVVFVATKHHAEYLKEMLDMQGVPCSHIYSALDQTARKINLGL
FLHGKVRALLVTDVAARGIDIPMLDNVINYNFPPKAKLFLHRVGRVARAGRSGTAYSLVA
HDETPYVYDLHLFLGRPLKLAGGPHADSDHEADGVLGRVPQSLIDDEDALLITDHERSLE
LQNLHQTSENAYKQYSKSRPAPAPESVKRVKEANYIQLGVHPLFWSRLGGEEIQRLKFVD
SIKSYKSKATIFEINATSKTPASEVMRAKRNQDYKVISKFQRLQEEKANSTAQSQARVKP
DLLASQDYTEENLEGVFSQVVGKRKRTDKTDTESDRKREKAGPTQDTEYYIPYRPKDFES
EKGLCVGGNSFEQAAAGAVLDLLGDQTEDLNKNKTVLKWDRKKKKFVGGGGHDDKKKVRT
ESGRLISSSYKTNKYEDWKKKYKIDDQDSEEEEGIQTGRTQRKGRGGRGGSRSMPRTEES
GPRGKIRTELRTKQQILKQRRIQDKQRFLQSGGMKKLKNKTKQRVQEMRKTAFGRGKSNG
FKKGKMRKRS
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaagaagaagaaagggcaccgggcacggaaaccggctaaagaccaagaggga
gagggcagcgacaccggggagtttgatgtcaccactggggtccccgaacaggatgaagtg
cgcctcccatcgttccccaccgcagatggtggttcggatacagaattggacactagacaa
ctggtccgagcacagaacaaaaagaaaaaaaagtcaggagggtttcaatcaatgggtctt
agttatcctgtgtttaagggtgtgatgaagaaaggttacaaggttccaacaccaattcaa
agaaaggtagtacctgtcattctggatggcaaggatgtggtagctatggcacgaactggc
agtggtaaaactgcttgtttcctcatcccgatgtttgagaagctgaaggctcacgttgca
caaactggagtccgtggacttattttatcacctaccagagaacttgccctgcagactctg
aagttcaccaaagagcttggaaaatttactggtttgaagactgctcttattttgggtggg
gacaagatggaagatcagtttgctgctctacatgaaaaccctgatataatcattgctacc
cctggccgtctgatgcacgtgtcagtagagatgaatctgaagttgcgcagtgttgagtat
gtggtctttgatgaggcagacagactttttgaaatggggtttgctgagcaactgcaggag
atcattgcccgtcttcctgaaactcgccaaaccttgcttttctcagccactcttcccaag
atgctgctagaatttgcccgtgcaggtcttaccgaacctgtactaatccgtctagatgtt
gacacaaagctaagtgatcagttaaagttggcattttttcatgtgagggctgaagataaa
cctgctgtacttctacatcttttgcgctgcattgtgaaacctcaggaacaaacggttgtc
tttgtggccaccaaacatcatgctgagtatctcaaagagatgctggacatgcaaggtgtc
ccatgttcccatatatacagtgctcttgatcagactgccagaaagataaacctgggtttg
tttctgcatggaaaagttcgtgctttattggtcacagatgtagcagctcgtggtattgat
atacctatgcttgacaatgtcatcaattataacttccctccgaaagccaaactttttctg
catcgcgtaggtcgtgtggctagagccggtcggagtggcacagcttattccctggttgct
catgatgaaactccttatgtgtatgatctccacctcttcctaggtagacccctgaaactg
gcaggtggcccacatgctgattcagatcatgaagcagatggtgttctgggacgagtccca
caaagtttgatagatgatgaagatgctctgctgatcacagatcacgagaggtctttagag
cttcagaacctgcatcaaacctctgagaatgcttacaaacaatacagcaaatccagacca
gccccagctccagagtctgtaaaacgtgtcaaagaggccaattacattcagttgggagta
caccccttgttctggtctcgtcttggtggggaagaaattcagagactaaagtttgtggac
agcattaaatcttataaatcaaaagcgacaatctttgagataaatgccactagtaagaca
cctgccagtgaagtaatgcgtgccaagagaaatcaagattacaaggtcatctctaaattc
cagcgtttgcaagaagagaaagcaaatagtacagcacagtcccaagcccgtgttaaacct
gatctactagccagccaagactatactgaagaaaatttggagggagtcttctcgcaagta
gttggaaagaggaagcggacagataaaactgacactgaaagcgacaggaagagagagaaa
gcaggacctactcaggataccgaatattacatcccatacagaccgaaggactttgagagt
gaaaaaggactgtgtgttggaggcaacagctttgagcaggcagcagcaggggcagtgctg
gatctgcttggggaccagactgaggatctcaacaaaaacaagactgtcctgaagtgggat
cgtaagaaaaagaagtttgtgggaggcggaggacatgatgataaaaagaaagtaaggaca
gagagtggaagacttatcagcagctcttataagacaaacaaatatgaggactggaagaaa
aagtacaagattgatgaccaggactctgaggaagaagaagggatacagacaggaagaaca
caaaggaagggaagaggtggacgtggtggctctcgaagtatgccccgtacagaggaatcg
ggcccccgtggcaagatccgcactgagctgcgcaccaagcagcagattctcaagcagaga
agaatacaggataagcagcgtttcttacaaagtggtggaatgaaaaagctgaaaaataaa
accaagcagagagtacaggaaatgaggaaaactgcttttggcagagggaagagcaatgga
tttaagaaaggaaagatgaggaaaagatcttga
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