Rana temporaria (common frog): 120939359
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Entry
120939359 CDS
T07929
Symbol
AP1B1
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X1
KO
K12392
AP-1 complex subunit beta-1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
120939359 (AP1B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120939359 (AP1B1)
Membrane trafficking [BR:
rtem04131
]
Endosome - Golgi transport
Others
AP-1 complex
120939359 (AP1B1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
Cnd3
PDS5
RTP1_C1
HEAT_GCN1
Arm
XMAP215_CLASP_TOG
HEAT_EZ
NELF-A_N
TOR1L1_N
PIK3R4-like_middle
HEAT_spiro
Arm_2
HEAT_Maestro
FANCI_S3
API5
Motif
Other DBs
NCBI-GeneID:
120939359
NCBI-ProteinID:
XP_040207884
LinkDB
All DBs
Position
1:complement(239938614..239981075)
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AA seq
955 aa
AA seq
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MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA
VAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLANYIPKDDREAQSV
CERVTPRLSHANSAVVLSAVKVLMKLMEMLSKDLDYYGTLLKKLAPPLVTLLSAEPELQY
VALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASPANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFRK
YPNKYESVISTLCENLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVAAKEV
VLAEKPLISEETDLIEPTLLEELICYIGTLASVYHKPPSAFVEGSRGVVPKRLPPRAGSS
ESAESPEVAPAGQQQVDTHPAVIPSQGDLLGDLLNLDLAPPISGPTLTTSSVPLGSVDLL
GGGLDSLIVEDTEGLGGGDTGPNLTLPTGFMAPPVAPGSLGAPLSGGLSDLFDLGTGTGA
VLGAYVAPKSVWLHAMKGKGLEISGTFARRSGAVFMDLVFTNRALQVMSDFAIQFNRNSF
GLAPAAPLQILTPLAPNQSTEVSLPLNTVGSVMKMDPLNNLQVAVKNNIDVFYFSVVYPL
HILFVEDGKMERQMFLATWKDIPNENEAQFQIRECPPNPDSVSNKLQASNVFTVARRTVD
GQDMLYQSIKLTNGIWVLAELRLQPGSPSSALSLKCRAPEVSSFVFQAVEAILKN
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgacggactcaaagtatttcacaaccaccaagaaaggtgagatctttgagctaaaagca
gaactgaacagcgacaagaaggagaagaagaaggaggctgtaaagaaagtcattgcctct
atgactgtggggaaggatgtcagtgccctgttccctgatgttgtgaactgcatgcagaca
gataacttggagctgaagaagctggtttatttgtacttgatgaactatgctaaaagccag
cctgacatggccatcatggctgtaaacacttttgtaaaggactgtgaagaccccaaccct
ttaatccgtgctttagctgtacgcactatgggttgtatacgtgtggacaaaatcacagag
tatctttgtgaaccacttcgtaagtgcctgaaagatgaggacccatatgtgcgcaagaca
gcagcagtgtgtgtagccaagctgcatgacatcaatgctcagctagtggaagaccagggt
tttctggacacattgaaagatctgatctctgattctaatccaatggttgtggctaatgca
gtagcagctctctcagagattgctgaatctcacccaagtagtaacttattggatctgaat
cctcagtcaatcaacaagctgctgactgctctaaatgaatgtactgaatggggtcagatc
tttatcttggactgtttggcaaactatatccccaaggatgatcgtgaagctcagagtgta
tgtgaacgagtaacaccacgtctttcgcatgcaaattcagcggttgtgctttcagcagtg
aaggtgctgatgaaattgatggagatgctgtctaaagatttagactattatgggacgtta
ttgaagaaactggcccctcctttagtcacactgctttctgctgagcctgaattgcagtat
gtggcattgcgtaacattaacctcattgtgcagaaacgaccagagatcctgaagcatgag
atgaaagttttctttgttaaatataatgacccgatttatgtaaaactggaaaagcttgat
atcatgatcagactggcatcgcctgcaaatattgcacaggttcttgcagaattaaaggaa
tatgctactgaagtggatgtggactttgtaaggaaagctgtaagagcaattggacgctgt
gccattaaagttgagcaatctgcagaacgctgtgttagtacactacttgatcttattcag
accaaggtgaattatgtggtccaagaagctatcgtagtgataaaggacattttcaggaag
tatccaaacaaatatgaaagtgttatctctacattatgtgagaacctggactcattggat
gagccagaggcaagagcagccatgatctggattgtgggggagtatgccgagcgcattgac
aatgccgatgagctgctggaaagtttcttggagggtttccatgacgagagcacacaggtc
cagctacaacttctaactgccattgtgaagctgtttttaaaaaaaccaacagaaacacag
gagctggtgcagcaagtacttagtttagctacacaggattctgataaccctgacttaaga
gatcgtggctacatctactggcgactgttgtcaactgacccagttgctgccaaagaggtg
gtgctggcagaaaagcctctgatctctgaggaaactgacctaatcgagcccacattactg
gaggaacttatctgttacattggtacactagcttctgtgtaccacaagcctccaagtgct
tttgtggagggaagccgtggtgttgtgcccaaaagattgccaccgcgggcaggctctagt
gagagcgcagagagtccagaagtggcacctgcagggcagcagcaagtggatacacaccct
gcagtcattccttcccaaggtgatcttcttggagatcttctaaacctggatttagcccct
cctatcagtggacccaccctaactacaagctctgtgcccctgggcagtgtggatctcctg
ggtggaggtctggacagcctgattgtggaagacacggaagggctgggaggaggagataca
ggtccaaatctcacactaccaacaggattcatggctcctccagtggcaccgggttccctt
ggtgcacccctttctggaggacttagcgacctatttgatttgggaactggaacaggagct
gttttaggtgcttatgtggctccaaaatcagtatggctgcatgccatgaaaggtaaaggc
ctggagataagtggtacttttgcccgcagatctggtgctgtatttatggatctagttttt
actaatcgtgcccttcaggtcatgagtgatttcgctatacaatttaatcgtaatagtttt
gggctggcacccgctgctccacttcagattcttacacctttggcccccaatcagtctact
gaggtgtccctaccattaaatacagttggatctgtaatgaaaatggatcctcttaataac
ttgcaggtggcagtaaagaacaacattgatgtgttttacttcagtgtagtatatcctctg
cacattctgtttgtggaagatgggaaaatggagaggcagatgtttttggccacatggaag
gacattcccaatgagaatgaggcacagtttcagattagagagtgtcccccaaatcctgat
tctgtaagtaataaactgcaggccagcaatgtgttcacagtggcccggcgtacagtggac
ggtcaggacatgctgtaccagtccatcaaactcacaaatggtatatgggtgctggcagag
ctaaggcttcagcctggaagccccagcagtgccctgtctctaaagtgccgggcacctgag
gtatcttcattcgtcttccaagccgttgaagccatcttgaagaactga
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