Rana temporaria (common frog): 120939636
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Entry
120939636 CDS
T07929
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120939636 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120939636 (NHLRC1)
Enzymes [BR:
rtem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120939636 (NHLRC1)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120939636 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_2
SdiA-regulated
zf-RING_5
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_4
Baculo_IE-1
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
120939636
NCBI-ProteinID:
XP_040207926
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All DBs
Position
5:complement(258733121..258735036)
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AA seq
399 aa
AA seq
DB search
MSSSSQKEIRTLKDFLDETEINLLECKVCFEKYSHQQRTRPRNLPCGHIMCQDCVSSLCN
PGNSKLECPFCRKGCRKSETSVCLPVLHLLEIIGRMVPDPPERRLTDWKSNQVAKLNSAR
FKLSASFGGWGLLFNPTGIAFCSNTGCLLVAHDGKKRLSRFTKNGKLVQEIGEKDSSENG
LVYAVSVAVTLDGFVAVTDAGDRSLKVYSQAGKCTLIVKKPFLLPWGVAINAENEVIISD
PIAGSLILVAADFGQGGIKKTLNICSYLSQPKEIAVCQANGSVIVVEHLTKDNKNSSSTR
IKILNNKMKLLKQIDSFSLSLFLPLDVHTSGVAFDQEGNILVADVNNRCIICLSKVEEGN
VFKHIVASGLSYPVAIAVIEDGSIAVLDSGNHSVLVYSP
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctcatcacagaaagaaatcaggactctgaaggattttttggatgaaaccgaa
attaacttacttgaatgcaaggtttgttttgaaaaatacagtcatcagcaaagaactagg
cctaggaatcttccttgtggccacatcatgtgtcaggattgtgtttcttccctctgcaac
cctggaaactcaaagctagaatgtcctttctgccgcaaaggttgcaggaagtctgagaca
agtgtttgccttcctgtcctacacctcttggagatcatagggcgcatggttcctgatccc
ccagaaaggcgactcacagattggaaaagtaatcaagtagcaaaactgaattctgcaaga
tttaaactaagtgcatcttttggtggttgggggttgcttttcaaccctaccggtatcgct
ttttgttccaacaccggctgtttgcttgtggcacacgatggtaaaaaaaggctttcaaga
ttcacaaaaaatggaaaattagttcaggaaattggagagaaagacagttctgaaaatggc
ctagtgtatgcagtcagtgtggcagtcacattggatggatttgttgccgtgaccgatgca
ggtgatcgttcactaaaggtgtacagtcaagctggaaaatgtactttgattgttaaaaag
cctttcctcttgccttggggcgtagccataaatgctgaaaatgaagtcatcatttctgac
cctattgccggcagtcttattttggtagctgccgacttcggccaaggtggcattaagaag
actcttaacatatgttcttatttgagccagcccaaggaaattgctgtctgccaagcaaat
ggatcagttattgtggttgaacacttgacaaaagacaacaaaaattcttccagtactcga
attaagattttaaataataagatgaagctcttaaagcaaattgatagttttagtttaagc
ctttttctgcccttagatgtgcacacatctggagtggccttcgatcaagaaggaaatatt
ttagtagcagatgtaaataacagatgtatcatttgcctgagcaaggtggaggaaggaaac
gtctttaagcatattgttgccagtggcctttcatacccagtagcaattgcagtgatagag
gatggctccattgctgttctagatagcggcaatcactcagtactagtttattctccataa
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