Rana temporaria (common frog): 120939746
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Entry
120939746 CDS
T07929
Symbol
EXOSC4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120939746 (EXOSC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120939746 (EXOSC4)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120939746 (EXOSC4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
120939746 (EXOSC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120939746
NCBI-ProteinID:
XP_040208015
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Position
5:complement(4644534..4650908)
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AA seq
249 aa
AA seq
DB search
MAGLELLSDEGFRQDGRRPAELRKIQCRMGVFEQADGSAYVEQGNTKALATVYGPHEIRG
PRSKTLHDRAVVNCQFSMATFSTAERKRRPHGDRKSTEMTIHLKQTFEAAILTQQYPRSQ
IDIYVQILQADGGNYCTSVNAATLAVIDAGIPMRDYVCACSAGFIEDTPLVDLSYIEEAA
GGPQLALALLPKSDRIALLEMNSRLHEDHLERVMDAATKACKDVYAVLDQAVREHLQETT
ALLGDRGSS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggcgggactggagctgctctccgatgaagggttccggcaggacgggaggaggccggcg
gagctccggaagattcagtgccggatgggggtgttcgaacaggcggacggatcggcctat
gtagagcaggggaacaccaaggcgctggccaccgtgtacgggcctcatgagatccgaggt
cctcgcagtaagaccctccatgaccgggcggtggtgaactgtcagttcagtatggccacc
ttcagcacggcggagaggaagcgacgcccccatggagaccgcaagtccaccgagatgacc
attcacctcaagcaaacgttcgaggcggccatcctcacccagcaatacccgcgctcccag
atcgacatctacgtacagatcctccaggcggacggcgggaattactgcacctctgtgaac
gcggccactctggcggtgatcgacgccggcatccccatgagggattacgtgtgcgcatgc
tcggccggcttcatcgaggacacgccgctggtggacttgagttacatcgaggaggcggcc
gggggccctcagctggcgttggctttgttgccgaaatctgaccggatagcgctgctggaa
atgaactcgcggctccacgaggatcacctggagcgcgtcatggacgcggccaccaaagcc
tgcaaggacgtgtacgccgtcctggaccaggccgtcagggagcatctgcaggagaccacc
gcgctgctgggagaccgcggctcgtcgtaa
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integrated database retrieval system