KEGG   Rana temporaria (common frog): 120939746
Entry
120939746         CDS       T07929                                 
Symbol
EXOSC4
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120939746 (EXOSC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtem03019]
    120939746 (EXOSC4)
Messenger RNA biogenesis [BR:rtem03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     120939746 (EXOSC4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     120939746 (EXOSC4)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 120939746
NCBI-ProteinID: XP_040208015
LinkDB
Position
5:complement(4644534..4650908)
AA seq 249 aa
MAGLELLSDEGFRQDGRRPAELRKIQCRMGVFEQADGSAYVEQGNTKALATVYGPHEIRG
PRSKTLHDRAVVNCQFSMATFSTAERKRRPHGDRKSTEMTIHLKQTFEAAILTQQYPRSQ
IDIYVQILQADGGNYCTSVNAATLAVIDAGIPMRDYVCACSAGFIEDTPLVDLSYIEEAA
GGPQLALALLPKSDRIALLEMNSRLHEDHLERVMDAATKACKDVYAVLDQAVREHLQETT
ALLGDRGSS
NT seq 750 nt   +upstreamnt  +downstreamnt
atggcgggactggagctgctctccgatgaagggttccggcaggacgggaggaggccggcg
gagctccggaagattcagtgccggatgggggtgttcgaacaggcggacggatcggcctat
gtagagcaggggaacaccaaggcgctggccaccgtgtacgggcctcatgagatccgaggt
cctcgcagtaagaccctccatgaccgggcggtggtgaactgtcagttcagtatggccacc
ttcagcacggcggagaggaagcgacgcccccatggagaccgcaagtccaccgagatgacc
attcacctcaagcaaacgttcgaggcggccatcctcacccagcaatacccgcgctcccag
atcgacatctacgtacagatcctccaggcggacggcgggaattactgcacctctgtgaac
gcggccactctggcggtgatcgacgccggcatccccatgagggattacgtgtgcgcatgc
tcggccggcttcatcgaggacacgccgctggtggacttgagttacatcgaggaggcggcc
gggggccctcagctggcgttggctttgttgccgaaatctgaccggatagcgctgctggaa
atgaactcgcggctccacgaggatcacctggagcgcgtcatggacgcggccaccaaagcc
tgcaaggacgtgtacgccgtcctggaccaggccgtcagggagcatctgcaggagaccacc
gcgctgctgggagaccgcggctcgtcgtaa

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