Rana temporaria (common frog): 120939838
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Entry
120939838 CDS
T07929
Symbol
MINDY4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120939838 (MINDY4)
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120939838 (MINDY4)
Ubiquitin system [BR:
rtem04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
120939838 (MINDY4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
120939838
NCBI-ProteinID:
XP_040208164
LinkDB
All DBs
Position
5:17455978..17526824
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AA seq
743 aa
AA seq
DB search
MSPRTEEVTASLIREFLSRKGLKKTRAALDEELPRTQQSISSRDELRAALHLDFLYKENK
LADKPLKTYLEIMTKHFLDKKTLTMEGKQTAECAKLFTPQGHQRKAAVSSNLAVYDLSDE
ESGSSCAVSETSHILSHKVEDSPASSQKHVYLRASGDGSKKTDSSMKSSSFSLEDELKNT
KENNCETTKISYTLNEPKSAAPENGRPKSSKIVRGMMSGPISSFQEDSLKKRPQRRPSAT
SPSSQTKNDPQKNEIIGKTEEPLSDGASNPALQLGKEFSAKLLGSAPSRNPAVSSIIKQD
KQPRNGPDTADSARDAYNNFKLKFALEAEQEKLQRPQRKSEPSKRKTTRSSLNDKGSHMD
DIKLDDVEEDLLAADAIGIPEVIARNKVQAEGRPIDLQQAVELKNLLFGSPLRCFSEEWK
IQSFTFCNIEDLKYGFVQKKGGACGVLAAVQACLLQNLLFGRDSDIRWALHPSDTVRTRC
LYRAIADILWRAGDCRQAVVSLSSGRQQFTPAGKYKADGILESLILYSFKKYDDLLTFLQ
QNINQFERGPFGCILLTVSSVFSRSIDLVQSDFDVPTNCLIGAHAYCTQELVNLILGGRA
VSNVFNDIMELDSGNGNTTVLKGVSSRSDIGFLSLFEHYSVCQVGSYLKTPKYPIWVVCS
ESHFSVLFCLKKDLVSDWRAERKFDLYYYDGLANQQEEIRLTIDTSGNYVEDEDNELVPP
LEFCIRTKWKGAVVDWNGTDPIL
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccggacggaggaagtgacggcttccctcatcagagagttcctcagcaggaag
gggctgaaaaaaacgcgtgcagctctagatgaagaactgccgcgcacgcagcagagcatc
agcagccgggatgaactgagggccgcgttacacttggactttttgtacaaggagaacaag
ttggctgataaacccctgaaaacatacctggaaataatgacaaagcattttcttgataag
aaaacgttgacaatggaaggaaaacagactgcagagtgcgccaagttatttaccccccaa
ggacaccagagaaaagcagccgtgagctcaaacctggccgtgtacgacctctcggatgag
gagagcggtagcagctgtgctgtatctgagaccagtcacattttatcccacaaggttgag
gacagcccagcatcatcacagaaacatgtatatctgagagcatcgggggatggaagtaaa
aaaacagacagtagcatgaaaagtagcagcttctctttggaggatgaattgaagaataca
aaggaaaataattgtgagaccacaaagatttcatacactctaaatgaaccaaaaagtgca
gcacctgagaatgggagaccgaaatcgagcaagattgtccgggggatgatgtctggtccc
atctccagctttcaggaggactcgctgaaaaaacgaccgcagagacgaccatctgcaact
tctccttcatcgcaaacaaaaaatgatccccagaagaatgagataattgggaagacagaa
gagcctctgagcgatggcgcttcaaacccagcgctgcaactggggaaagaattctccgct
aaactgctgggctccgctccgtctagaaacccggctgtgagctccatcattaagcaggac
aagcagcccagaaatggaccggacactgctgacagcgccagagatgcttataataacttc
aaattaaagtttgctttagaagcggagcaagagaagctgcaaaggccacaaagaaagagc
gaaccctcaaaaaggaagacgactcgatctagcttgaatgataaaggaagccatatggat
gatatcaagttagatgatgttgaagaggatttattggcagccgatgcaatagggatccca
gaggtcatcgcacggaataaagttcaggcagaaggaagacctattgatttgcaacaagct
gtggagctaaaaaatctgctgttcggatctcctctgcgctgcttcagtgaagaatggaaa
attcagagcttcaccttctgtaacattgaggatttaaagtacggctttgtgcagaaaaag
ggaggggcctgcggagttttggctgcggttcaggcttgtttgttgcagaaccttctgttt
gggagagattctgatatcaggtgggcactgcatccttcagacaccgttcgaacacgctgt
ctgtacagagccatcgccgacatcttatggcgtgctggagactgtaggcaagctgttgtc
tctctgtcctccggaaggcagcagttcactccagctgggaaatataaagctgatggaatc
ctagaaagtctcatcttgtacagctttaaaaaatatgacgatcttttaacttttcttcaa
caaaatattaatcagtttgaacgtgggccatttggttgcattctgcttacagtgtcttct
gtcttctcgagatctattgatctggttcagagcgactttgacgttcccaccaactgccta
attggggctcatgcttattgcacacaagagcttgtcaatctcatcctgggaggtagagct
gtgtccaacgtcttcaatgacatcatggagcttgattctgggaatgggaacaccactgtc
ctaaagggggtttccagccgcagcgatattggctttctctccctctttgaacattacagt
gtgtgccaggttggttcctatctcaagaccccaaagtatcctatctgggtggtctgcagt
gagagtcactttagcgtcctattttgcttgaagaaggatttagtgagcgactggagagcg
gaaagaaaatttgatttatattactatgacggactggcgaatcagcaggaggagattcgc
ctcacaattgatacctcagggaattatgtagaagatgaagacaatgagttggttcctccg
ctggagttttgtattaggaccaaatggaaaggtgctgttgtagactggaatgggacggac
cccattctttaa
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