Rana temporaria (common frog): 120939869
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Entry
120939869 CDS
T07929
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120939869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120939869
Membrane trafficking [BR:
rtem04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120939869
Protein recycling
Other Rab GTPase associated proteins
120939869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
Motif
Other DBs
NCBI-GeneID:
120939869
NCBI-ProteinID:
XP_040208212
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All DBs
Position
1:complement(243601881..243637851)
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AA seq
451 aa
AA seq
DB search
MSSVSPGQEHVPLHHGQNLTLPHNDYVPFQFQGLVYKPELCRKNCGFYGNPAWHGYCSRC
WIQKRQQTQPLTNGFRHHNAHLLCKPDMGAGYQQDAYHNINVNRKQNAFPENEEHTAKGS
VRPLFLSYLLSLGQGNFSDFLKALHRPDAHELLTHCTNFIQRIQNANNLTVDKKAEDVQT
LYRQIGDHIPDTSEEKDQLLDNIEKLVMTRIYKSVFCMHDPQEEQKDLSLQNHIRSLSWI
TPKILQFSLCEQDEEVSDQIASAVTALLEMDFKRAPQDKLACMTKACDHLFRAIDISTKE
PATTDDLLSGLIYITIKANPPRLFSNLKYITRFCNPKRLMTGKCAYWFTNFCSASSYIET
MNFSSLGLTEEEFNHIMQQKRCDFAGSNIQGTVQKMEENKQLLVDLQYRQEVLIQKAECL
LREIKAWPVSLQGEVQELLHKFPLDIKHQTN
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgtttcgccagggcaggaacatgttccacttcaccatggacaaaatctcacc
cttccacacaatgactatgtgcctttccaatttcaagggcttgtctacaaaccagagctg
tgcagaaagaattgtgggttctatggtaacccagcatggcatggctattgttccagatgc
tggatccagaagcgacagcagactcagccgctcacaaatggctttaggcatcacaatgca
catctactatgtaaaccagatatgggtgcaggttatcaacaggacgcatatcacaacatt
aatgtcaacagaaagcaaaatgcctttccggaaaatgaagaacatactgcaaaaggttct
gtacgccctcttttcctctcctaccttctttctctgggtcaaggaaatttttcagacttt
ctgaaagcccttcatagacctgatgcacacgagttactgacacattgcactaatttcatt
caaaggatacaaaatgcaaataatcttacagtggataaaaaagcagaagatgttcagact
ttatatagacaaattggggaccacattcctgatacatcagaggaaaaagatcagttattg
gataatattgagaaactggtcatgactcgtatatacaagtcggttttctgtatgcatgat
ccacaggaggagcaaaaagatctttcacttcagaatcatattaggtcactgagctggatt
actcctaagattcttcagttttctttgtgtgaacaagatgaagaagtcagtgatcagatt
gccagtgctgttacagctctgctagaaatggattttaagagagccccccaggacaagctt
gcctgtatgacaaaagcctgtgaccacctttttagggccatagatatttctacaaaggag
ccagccaccactgatgaccttctatcgggtctgatctacatcacgattaaggcaaaccca
cctcgtcttttttctaatttgaagtatatcacaagattctgcaatccaaagaggctaatg
acgggaaagtgtgcctactggtttaccaacttttgttctgcatcctcttacattgagact
atgaatttttcatctctggggctcacggaagaagagttcaatcatataatgcagcagaaa
agatgtgactttgctggaagtaatatacagggcacagtgcagaagatggaggaaaacaag
cagcttttggtggacctgcagtaccgccaggaggttctgatccaaaaggcagagtgcctg
cttagagaaattaaagcttggcctgtgtctctacaaggtgaagtccaggaactcctgcac
aagttccctctggatattaagcatcagacaaactaa
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