Rana temporaria (common frog): 120939885
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Entry
120939885 CDS
T07929
Symbol
DYNC1I1
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04145
Phagosome
rtem04814
Motor proteins
rtem05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120939885 (DYNC1I1)
09142 Cell motility
04814 Motor proteins
120939885 (DYNC1I1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120939885 (DYNC1I1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120939885 (DYNC1I1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtem04812
]
120939885 (DYNC1I1)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
120939885 (DYNC1I1)
Cytoskeleton proteins [BR:
rtem04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
120939885 (DYNC1I1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_CDC20-Fz
Beta-prop_EML
Dynein_IC2
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_RFWD3
ANAPC4_WD40
Phage_connect_1
Motif
Other DBs
NCBI-GeneID:
120939885
NCBI-ProteinID:
XP_040208234
LinkDB
All DBs
Position
5:complement(28751945..29294018)
Genome browser
AA seq
712 aa
AA seq
DB search
MPPKRRVSKEKKDPKKQENQAAAASSSQNKATKSQEKPVRTVPSKARRIKEEATESLLVT
KTSAAEVALPEKIQEYIMSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKEAEQQLQI
EPIHEDSDLDRKRRETEALLQSIGISPEPPLVPTPMSPSSKSLSTPSEAGSQDSVDGAIM
GRNIQSGLMGTLQWDTDPSVLQLHSESDLGRRLLKLGVSKITQVDFLPREVVSYSKETQT
PITTHRVEEEEEDEEMVELKTDHDSEFDNQEEKQDSKEVPPRELTEEEKQQAVHSEEFLI
FFDRTIRVIERALAEDSNIFFDYSGGDLEDKEGDIQAGTNLSFNRQFYDEHWSKHRVVTC
LDWSLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYIFHCQSSVMSVCFARFH
PNLVIGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPIYCVNVVGTQNAHNLITVSTD
GKLCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGS
KAGISEVFDGHQGPITGINCHSAVGSIDFSHLFLTSSFDWTVKLWTTKHNKPLYSFEDNA
DYVYDVMWSPLHPALFACVDGMGRLDLWNLNNDTEVPTASTTVEGSSALNRVRWAQSGRE
VAVGDSEGRIWIYDVGEFAVPHSDEWSRLARTLVEIRANRGDGEEEAVELST
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcccccaaaaagaagagtttcaaaggagaaaaaggatccgaagaagcaagaaaaccaa
gcggctgcagccagcagcagtcaaaacaaggccaccaaatcacaggagaagccagtccgc
actgtgccatccaaggcgagacgtataaaagaggaagcaacagaatctcttttggtgacc
aagactagtgctgcagaggtagctctgcctgagaaaatccaggagtacataatgtctgac
aaaagtgacctgaaagctgaactggaacgcaaaaagcagcgtttagcacaaatacgggaa
gagaagaaacgtaaagaggaggagcggaaaaagaaggaggcagaacagcagctacaaata
gagccaatccatgaagattctgatctagaccgcaagaggcgtgagacagaagctttgctg
cagagtattgggatctccccagagccacctctagttccaaccccaatgtctccttcatca
aaatcactgagcacgcccagtgaggccgggagccaggactctgttgatggtgcaataatg
ggacggaatattcaaagtggccttatgggaaccctgcagtgggatactgacccgtctgta
ctgcagctgcattcagagtccgaccttggaagaagacttcttaaacttggagtctcaaag
atcacccaggtggatttcctacctcgagaagtcgtttcttactccaaggagacacagacg
ccgatcactacacatcgggtagaagaagaggaagaggatgaggaaatggtggaactaaaa
acagatcacgattcggaatttgacaatcaagaagaaaagcaggattcaaaagaagttcca
cctagagaactaactgaagaagaaaaacagcaagcagtccactcagaggaatttctgata
ttctttgatcgcacaatccgtgtcattgaacgagcgctggctgaagactcaaatattttc
tttgactacagcgggggagacctggaagataaagaaggggacattcaagctggcaccaat
ctgtcatttaatcgtcagttttatgatgagcactggtcgaagcatcgcgtggtaacctgt
cttgactggtcattacaatatcctgagctgatggtggcatcttacaataataacgaagat
gctcctcatgaacctgatggagtcgctttagtatggaacatgaagtttaagaagacaact
ccagaatatatatttcactgccagtcctctgtcatgtctgtctgctttgctcggtttcat
ccaaatctcgtgatcggtggaacgtactctggacagatagttttatgggataatcgcagc
catcggaggactccagttcaaaggacgccactttctgctgcagcgcacactcatcccatc
tactgcgtgaatgtagtggggacacaaaatgcacacaaccttattaccgtttccacggat
gggaaattgtgctcctggagcttggatatgctctcaactccgcaggaaagtatggaactc
gtctacaataaatccaaaccagtggcagttactgggatggcatttcctactggagatgtt
aataattttgtagtcggaagtgaagaggggacggtgtacacagcctgccgccatggaagc
aaagctgggatcagtgaggtgttcgacggtcatcaagggcccataacaggaattaattgc
cacagcgcagtgggatccattgacttttctcatctgttcctgacatcatcctttgactgg
acggtcaaactgtggacaacaaagcacaacaagccgctctactcctttgaagacaatgca
gactatgtctacgacgtcatgtggtcacctctgcaccccgcactgttcgcctgtgtggat
gggatggggcgcttggatctctggaacctgaataatgacaccgaggttcccactgcaagc
acaaccgtggaaggatcgtctgcgctgaatcgcgtgcgctgggctcagagcggccgagag
gtggcggttggggattccgaaggccggatttggatttatgatgtcggagagtttgccgtt
ccgcacagtgatgaatggagccgccttgcccgcacactggtggagatccgtgccaacaga
ggagatggagaggaggaggctgtggagttgtccacctga
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