Rana temporaria (common frog): 120939895
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Entry
120939895 CDS
T07929
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120939895
04121 Ubiquitin system [BR:
rtem04121
]
120939895
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120939895
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120939895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
zf-C2H2_12
hAT-like_RNase-H
DBD_Tnp_Hermes
zf-Di19
Motif
Other DBs
NCBI-GeneID:
120939895
NCBI-ProteinID:
XP_040208290
LinkDB
All DBs
Position
1:complement(173636620..173640728)
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AA seq
681 aa
AA seq
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MAEVEQKEREIKNAPSFLKANIWEHFGFYEKSGKHELDKSYAVCKICHTKIKYLGNTTNL
RNHVSRFHPEMLKPTTTTTKEMNPDQPRIDAMLQSTLPPNSEKVKRITKAVAAFIAKDLR
PYSVVENSGFRYLLKTIEPRYKIPSRSHFTENVIPALYHETKAKIIASMSQASRVAITCD
SWTSVTTESYVTITAHYVSKDWQILSHVLQTRAIYESHTGAHLAELLSHVVEEWQLSDKS
VVLVTDNASNMIVAAQVGKFPHVKCFAHTLNLASQRALKVATLSRLLGRVRRISTFFHRS
TRASHCLKEKQKCLGLKNHKLITDVATRWNSAYDMVERFLEQQPAVCATLLSPEVRRGES
DLCTLNETDVSNAEDAVSALKPMKDATMLMSEERNPTVSLIAPINAQLLQSMTDTMGDTP
MIHEIKNSIRTDLQKRYSSEAEKKILHTASALDPRFKGLPFILTDEERLEIFKGVTEEAA
SLEITSDESERTQEDHQVPRRKRTLEEEDSSPIEDNHSPSPPSPPKKARSLLVSLLGQSF
TDTEGTIEPKKTPYAKAEEEMENYCKAPPLPLTEDPLNWWREHEVIFPLLSRLSKQYLCI
PGTSVSAERVFSTAGDVVTAKRSALKPSFSSTGVTGVEWRGDGEWFSIMRLGLTFNQKNS
VFNSRQLTPAKPPEEGKSLKE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtagaacaaaaggaacgagagataaaaaatgcacctagctttttaaaagca
aacatctgggaacattttggcttttatgaaaaaagtgggaagcacgaattggacaagtca
tacgctgtgtgtaaaatctgtcacacaaaaattaaatatctagggaatactactaatctg
agaaaccacgtcagccgttttcacccagaaatgctaaaacctaccaccaccaccaccaag
gaaatgaacccagatcagccaagaattgatgcaatgttacagtcaactttgccgcccaac
tctgaaaaggtaaagagaataacaaaagctgtggcagctttcatagcgaaggacctgcgc
ccttactctgttgtggaaaacagtgggtttcgctaccttttgaagacgatagagccgcgt
tacaagatcccgtcacgaagtcactttacagaaaacgtcatacctgcactctaccacgaa
accaaagctaagataattgcatcaatgagccaagcaagtcgagtcgcaataacgtgtgat
tcctggacttcagtcacgacagagtcttatgttacaataacagcacattacgttagtaag
gactggcagattttgtcgcatgtactgcaaacgagagccatttatgagtctcacacgggt
gctcatctggcagagctactttctcatgttgtggaagaatggcagctgtccgataaatct
gtagtgcttgtgaccgacaacgcgtcaaacatgatagttgcagctcaagttggaaaattc
ccccatgtgaaatgcttcgcccatacactgaatcttgcatcccagcgagcgttgaaagtg
gccactctctctaggcttcttggcagagtacgtcggatatccacattctttcaccgcagc
actagagcaagccactgtctaaaagagaaacagaaatgtcttggcctgaagaatcataag
ctgataactgatgtggcaacaagatggaacagtgcatacgacatggtcgagaggttcttg
gaacaacaacctgcagtctgtgccaccttgctgtctccagaagtcagaagaggagagtcc
gatctctgcactctaaacgaaacagatgtgtcaaatgcagaggacgccgtgagtgcatta
aagccaatgaaggatgcaaccatgctgatgtcagaagagcgcaatccaacagtttctctc
attgcccctataaatgcacaacttctccagagcatgacagacacgatgggagacacaccc
atgatccatgagatcaagaattctattagaacagatctccagaagaggtacagcagtgag
gccgagaagaagatccttcatacagcctctgcactggatcctcgctttaagggactgcct
ttcatcctcacagatgaagaaagattggagatatttaaaggagtcactgaggaagctgca
tccttggagattacatcagatgagagtgagaggacacaagaggatcatcaagtgcctaga
agaaaacgaactctggaagaagaggacagttcacccatcgaagacaaccattctccatct
ccaccatctcctcccaaaaaggccagatcgctgctcgtgagtttgctgggacagtctttc
actgacactgaaggtacaatagaacccaaaaagaccccctatgccaaggctgaagaggaa
atggaaaactattgtaaagccccacctctgcctctcactgaggaccctttgaactggtgg
cgtgagcatgaggtcatatttcccctcctttctcggctgtcaaagcaatacttgtgtatc
ccaggtacaagcgtgtctgcagagcgggttttctccactgcaggagatgtggtaactgca
aaaagaagcgccctcaaaccatcttttagcagcactggagtcactggagtggagtggaga
ggagatggagaatggttttctattatgcgactgggtttaaccttcaaccaaaagaattct
gtatttaattccagacaactgacgcccgccaagccaccagaggaaggcaaatccttgaaa
gaataa
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