Rana temporaria (common frog): 120939908
Help
Entry
120939908 CDS
T07929
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120939908 (VPS50)
Membrane trafficking [BR:
rtem04131
]
Protein recycling
Others
EARP complex
120939908 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DcpS_C
Motif
Other DBs
NCBI-GeneID:
120939908
NCBI-ProteinID:
XP_040208270
LinkDB
All DBs
Position
5:complement(32511946..32814029)
Genome browser
AA seq
962 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQDSVHDLSPVENFRLPSKEEQRDFREQAIDPEAEQEIINSIEEV
YFSNDSLDIVKYELEKLPPVLSLQEIEEYRDKLKRQQAAVSKKVADLILEKQPSYVKELE
RVTSLQTSLQLAAVICSNGRRHLSTAKEGFTEASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISDLNSKLQDTLEQIEEQLDVA
LSKICKNFDFAHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLPYKDLCMHITSDSYIPCLTDLCKALWEVMLSYFCTMQWHEKNDQEEPQAASDS
ISANEENNFDRSYVKKKLEHGLTRIWQDVQLKVKTYLLGTDMSNFKYDDFIVVLDIISRL
MQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSSFSIIQ
LHEFKCLNQSRSPSMSPSKQASATDSATMSLFDQYISEGNPFEIQSSMKEDETEDVLTSN
GYESDELEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPSKSVSRETLRSRKRSDYSLNKM
NAPILTNTTLNVIRLVGKYMQMMTILKPIAFDVIHCMSQLFDYYLYAVYTFFGRNDAYES
TGLGLSSSRLRTTLNRIQESLIDLEVSGENAGSLAPSEERKEKVPSPHLSQLVVLTSSNT
LYGLSQRVVATESLVFLAEQFESLQTHLDSVMPSAKKPFLQQFYSQTVSTASELRKPIYW
IVAAKAIDYEQLLVLMANVKWDVKEIMSQHNVYVDALLKEFEQFNKKLAELSKHVRIPLP
VSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDYQQFLMKLEKLTDIRPIPDKEF
VETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDMDRP
KR
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctctgatgacccgccagggtctcaaaagtccacaagacagcgtc
catgatctcagtccggttgaaaactttagacttccgtccaaggaggagcagagggatttt
cgtgaacaggccattgatcctgaagctgaacaggagatcatcaacagcatcgaagaagtc
tacttctccaatgactcgctggatatagtcaaatatgagctcgagaagcttccacccgtc
ttgagtctgcaggagattgaagagtacagagataagctgaagagacaacaggcagcggtg
tcaaaaaaagtcgctgatctgattctagagaaacaaccctcgtatgtgaaggagctggag
cgagttacatctctacagacgagtcttcaacttgctgctgttatatgttctaatggaagg
agacacttaagtacagcaaaggaaggattcacagaagccagtctcggacttctggcaaac
cagcggaaacgtcagctattgattggcctgctaaagtctctgagaacaattaaaaccctg
caaagaaccgatgtgcgcctcagtgagatgctggaggaagaagattaccccggagccatt
caactgtgtctggagtgtcagaaagcagcaagtacttttaaacactacagctgtataagt
gacctgaattcaaaactgcaagacaccttggaacaaattgaggaacaattggatgttgcg
ctgtctaagatctgcaagaactttgattttgctcattacacaaaggtgcagcaggcgtac
agactgctggggaaaacgcagactgcaatggaccagctgcacatgcacttcacacaagcc
atccacaacaccgtgtttcaggtggttctgggatacgtggagctgtgcgccggaaatacg
gataccaagtttcagaaactgccctacaaagacctctgcatgcacataacatccgatagc
tacatcccatgtttgactgacctctgcaaggcactgtgggaagtcatgctaagttacttt
tgtacaatgcaatggcatgagaagaatgatcaggaggaacctcaggctgcttctgatagt
atctctgcaaatgaagaaaataactttgatcgaagctacgttaaaaagaagctagaacat
ggattaacgcgcatatggcaggatgttcagctgaaagtgaaaacgtaccttcttggaacg
gatatgtccaacttcaaatatgatgacttcattgtggtcctggatataattagcagacta
atgcaggtgggagaagagttttgtggcagcaagtcagaagtcttacaggaatccataagg
aagcaaagtgtcaactattttaagaactatcacagaacgcggcttgaggagctccgaatg
ttcctcgaaaatgaaacgtgggagctgtgcccagtcaagtccagtttcagcattatacag
ttacatgaatttaagtgtttgaaccagtctcgttccccgtcgatgtcaccgagtaaacaa
gcgtctgcgaccgactctgccacaatgtcattgtttgatcagtatatcagcgaaggcaat
ccttttgagatacaatcttctatgaaggaagatgaaacggaggatgtgctgacatccaat
gggtatgaatctgatgagctggaaaaaagtgcttatcaggagtacgacagcgacagcgac
gttccggaggagctgaagcgggattatgtggatgagcagaccggggatgcgccatcgaaa
agtgtttcgagagagaccctgcgcagcaggaagcgatctgattacagcctgaacaagatg
aatgcgcccatccttaccaacacaacgctcaatgtaataaggcttgttggaaagtatatg
cagatgatgactatattgaaacctatcgcctttgatgtgattcactgcatgtcacagctg
tttgattactatctgtacgccgtctatacgttttttggaagaaatgacgcatatgaatcc
actgggctcggtctaagcagcagtcggctcagaacaacattaaacagaatccaggaaagt
ctcattgatttggaagtgtccggggaaaatgctggatctctggcaccgtccgaagaaaga
aaagagaaagttccgagtccacatcttagccaattggtggttctgacgtctagcaatact
ctgtatgggctctcccagagagtggtggctacagagtccctggtcttcttggcggagcag
tttgaatctctgcagactcatctggactcggtgatgccgtctgctaaaaagcctttcctg
cagcagttctattctcagaccgtgtccaccgccagcgagctccgcaagccaatttattgg
atcgtagcggcgaaggctattgattatgagcaattacttgtgcttatggcgaacgtgaaa
tgggatgtaaaggaaatcatgtcacagcacaatgtatatgttgatgctttattgaaggaa
ttcgaacaatttaacaagaaattggctgagctgtcaaagcatgtccgtatacctttgcct
gtgtctaatatcctctgggaacactgtatacgactcgccaacaggacacttgtggaaggg
tacgccaatgtgaagaagtgcagcaatgaagggcgagctctgatgcagttggattatcag
cagttcctgatgaagctggaaaagctgacagacatccgtcccattcctgataaggagttt
gtggaaacttacattaaggcctattacctgaccgagaacgacatggagcgatggatcaag
gagcacagggaatactccacgaagcagctaaccaacttggtgaatgtatgccttggttcc
cacatcaataaaaaggccaggcagaagctcctggcggctattgatgacatggaccgacca
aaaagataa
DBGET
integrated database retrieval system
