Rana temporaria (common frog): 120939953
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Entry
120939953 CDS
T07929
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120939953
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtem02000
]
120939953
04147 Exosome [BR:
rtem04147
]
120939953
04090 CD molecules [BR:
rtem04090
]
120939953
Enzymes [BR:
rtem01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120939953
Transporters [BR:
rtem02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120939953
Exosome [BR:
rtem04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120939953
CD molecules [BR:
rtem04090
]
Proteins
120939953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Zeta_toxin
RsgA_GTPase
Rad17
AAA_29
AAA_30
AAA_7
AAA_14
G-alpha
AAA_15
AAA_24
DUF87
DUF2336
Motif
Other DBs
NCBI-GeneID:
120939953
NCBI-ProteinID:
XP_040208355
LinkDB
All DBs
Position
5:complement(40150074..40215779)
Genome browser
AA seq
1220 aa
AA seq
DB search
MLVGTIAAVAHGAALPLMTIIFGDMTNSFVSEGKDTKNMSTAAEGNITESLQEQMTTFSY
YYTGLGGGALIAAYFQISCWTLAAGRQSKKIRQNFFHAVLRQDISWFDVSDAGQLNTRLS
DDVSKINDGIGEQLAMLFQYAATFLTGFVIGFVKGWKLTLVVLAISPLMGLSAALWSKIM
AAFTNQELEAYAKAGAVAEEVLAAIRTVIAFGGQNKEIERYEKNLEDAKNIGIKKAITSN
VSIGFAFLTIYSAYGLAFWYGTTLVIHEAFSTGDILTVFFSVTFAAFSFGHAAPNIEAFS
TARGAAYSVFQIIDNEPKIDSFSTVGHKPDKIKGDIEFRNVKFTYPSRPNVQVLKGLNFK
IQSGQSVALVGSSGCGKSTTVQLIQRFYDPEEGSISIDGRDIRNLNTRYLRELIGVVSQE
PVLFDTTIAENIRYGRDDVTMMEIEQATKQANAYNFIMELPDKFDTLVGERGTQLSGGQK
QRIAIARALVRNPKILLLDEATSALDTESEAIVQAALDKVRTGRTTIIIAHRLSTIRNVD
SIAGFNNGNITEQGSHNELMKRDGIYHKLVSMQAVEAAEDDDNENRNDGVPEDTPDLNHS
GGKLVRRLSSRKSVGRTSEKQDTQQEEKDKEMSDEPPPISFFKILKLNKPEWLYFVVGVI
CAIINGGTRPAFAIIFSRIIGVFAGQEDEIRSRSNLFSLMFVALGGISFVTFFLQGFTFG
KAGEILTKRLRLLTFKAMLRQEIGWFDDFKNSTGALTTRLASDASKVQGATGARLASLSQ
NIANMGTAIIISFIYGWQLTLLLLVIIPILAISSVIRMKMFTGHAIKDKADLENAGKVAL
DAIENIRTVVSLTREQKFEDLFEEKLEGPYRNSIKNAHMQGFSYGLSQAIMFFAYAASFR
FGAFLAVQGYMTFENVFLVFAAIVFGAMALGQTSSFAPDYAKAKVSAAYIFSLLERQPLI
DSYSTAGNTPPQCNGNITFKGIHFNYPTRPEVAVLQGLDITVEKGETLALVGSSGCGKST
SIQLLERFYDPQSGEVCIDGSDVKALNIQWLRAQMGTVSQEPMLFDCSIAENIAYGDNSR
KVKQEEIEQAAKEANIQSFIESLPDKYNTRVGDKGTQLSGGQKQRIAIARALIRQPKVLL
LDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADKIAVIQNGKVVELGTHQ
QLLQLKGAYHSLVTIQLSPT
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgctagttgggacgatcgcagcagttgcccatggagctgccctccctctcatgacaatc
atatttggcgatatgacaaacagttttgtttctgagggcaaagatacaaaaaatatgtca
acagcagctgaagggaatataacagaatccttgcaagaacaaatgaccacgttttcctat
tactacaccggtctgggaggaggggctctaattgctgcctactttcagatctcatgctgg
actctggctgctggacggcagagtaagaagatcagacagaactttttccacgctgtgctg
cggcaggatatcagctggttcgatgtcagcgacgcaggacaactaaacaccagactaagc
gacgatgtctccaaaataaatgatggtattggtgagcagcttgccatgctgtttcagtac
gccgctaccttcctgacaggttttgttatcggatttgtgaaggggtggaagctaactctg
gtggttttggcaatcagtccacttatgggactgtcagcagctctgtggtcaaagatcatg
gcagcatttaccaatcaagagctagaagcctatgccaaagccggagcggtggcagaagaa
gtcttggcagcaatccggacagtcatagcctttggtggacaaaataaggaaattgaaagg
tatgaaaagaatttggaagatgccaagaacattggaatcaaaaaggcaatcaccagtaat
gtgtcaattggatttgcattcctaaccatatactcagcatatgggctggcattttggtat
gggaccaccctggttatccatgaagctttcagcactggggatatattgacggtgtttttt
tcagtaacatttgccgcctttagctttggtcatgctgcccccaatatagaagctttttct
acagcgagaggagcagcttacagtgtattccagattattgataacgaaccaaagattgac
agtttttccacagtaggacataaacctgacaagataaagggagatattgagttcagaaat
gtgaaatttacttatccatccagacccaatgtccaggttttgaaggggttgaacttcaag
atccaaagtggccagtctgtggccttagttgggagtagcggttgcggtaaaagtaccact
gtccagctcattcagaggttctacgatccagaggaaggctcaatctcaattgatggacga
gatattcgcaacctcaacactaggtatctacgagaactaattggtgtggtgagccaggaa
ccagttctctttgacactacaattgcagagaatatacgatatggccgagatgatgtcaca
atgatggaaattgaacaggccaccaaacaagccaatgcctacaatttcatcatggaatta
ccagataaatttgacactcttgtgggggagagaggaacacaactgagcggaggtcagaag
cagaggatcgccatcgcacgggcgctggtccgcaatcctaaaattcttcttctggatgag
gccacctccgctctggacacagagagtgaagccatcgtccaggccgccctggataaggtc
agaacaggccggactactattataatcgcacatcgcttatcaacaattagaaatgtagac
agtattgctggattcaacaatggcaacatcacagagcagggaagtcacaacgagctcatg
aaaagggatggaatctaccataaacttgtcagcatgcaggctgtagaagcggcagaggat
gatgataatgaaaacagaaatgatggggtaccagaggataccccagacttaaatcactca
gggggaaaactggtcaggagattgtctagccggaaaagcgtggggagaacttcagaaaaa
caagacacccaacaggaagagaaggataaagaaatgagtgatgaacccccaccaatctca
ttcttcaagatcctgaagctaaataaaccggagtggctgtattttgtggtgggagttatc
tgtgccataatcaatggtggtactcggcccgctttcgctattatattctccaggattatt
ggggtatttgcaggacaggaagatgaaattagatcaagaagcaatttgttctcactgatg
tttgtggcccttggaggaatctcttttgtgacctttttcctacagggatttacatttggg
aaagcaggggagatccttacaaagaggctgagacttctgacattcaaagcgatgctgaga
caggaaattggatggtttgatgacttcaaaaacagcactggtgccttaactacaaggctg
gcttctgatgcttcaaaggttcaaggagctacaggggccagactggcatcactctcccag
aacattgcaaacatgggtactgccattatcatatctttcatttatgggtggcagttgact
cttctcctgttggtcattataccaatcctggccatttcttctgtcatcaggatgaagatg
ttcactggacatgccataaaagacaaagcagatttagaaaatgcaggaaaggttgccctt
gatgctattgaaaacattcggacagttgtatctttaacccgagagcagaaatttgaagac
ctgtttgaagaaaagctggaaggtccttataggaattccatcaagaacgcccatatgcaa
ggtttctcctatggattatcccaggctatcatgttctttgcgtatgctgctagttttagg
tttggtgcctttttagcggtgcaaggatacatgacctttgaaaatgtgtttctggtattt
gcagccattgtttttggagccatggctttgggtcagaccagctcctttgctccagactat
gcaaaagctaaagtgtcagcagcttatatattcagcctgctggagagacaacctctcata
gacagctacagcactgctggaaacacacctccacaatgcaatggaaatatcaccttcaag
ggaattcactttaactatccaaccaggccagaagttgcagtgctgcaaggtttggacatc
actgtggagaaaggtgaaactctggcattagtgggtagcagtggatgtgggaaaagtaca
tccattcagctcctggaaagattctacgatccgcagagtggagaagtgtgcatagatggt
tctgatgtgaaggctttgaacatccagtggctgcgggcacaaatgggcactgtatcccaa
gagccaatgctgtttgactgcagcatagcagagaacattgcatatggagacaacagccga
aaggtgaagcaagaggagattgaacaggcagccaaggaggccaatatccagagcttcata
gagtctctacctgataaatacaacacccgtgttggagataagggcacccaactgtctgga
ggtcagaagcagaggatcgccatagcccgagcccttatccggcaaccaaaagttctactg
ctggatgaagctacatccgccctggacacagagagtgaaaaggtggtacaggaagctcta
gataaagctcgagaggggcgcacctgtatagtgatcgcccatcgactctccaccattcag
aatgcagacaaaatagccgtcatccagaacgggaaggttgtagaactgggaacacatcaa
cagctactgcaacttaaaggtgcctatcactcgctggttactatacaactcagtccaaca
tga
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