Rana temporaria (common frog): 120940048
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Entry
120940048 CDS
T07929
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120940048 (ZEB1)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
120940048 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-C2H2_15
zf-met
Zf-C2H2_ZNF451_C
zf-C2H2_6
Zn_SUZ12
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
120940048
NCBI-ProteinID:
XP_040208554
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All DBs
Position
5:59001586..59195523
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AA seq
1093 aa
AA seq
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MADGPRCKRRKQANPRRNNVTSYNNVLDANSDSDDEDKLHIVEEESVTDAADGEGDLPED
DLPTDQTVLAEGSESVKQSCWDDEDGTDANEILGPDADDIGCTDAHDEECDSDVENEQNH
DPNVEEFLQQSDTAVIYPEAPEDDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGYKRY
TSLKEHIKYRHEKNEDNFSCSMCSYTFAYRTQLDRHMTSHKSGKDQRHVTQSGGNRKFKC
TECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGVIPVNGRA
RSGLKTPQCSSPSLSASPGSPVRPPIRQKIENKPLQEQLPINQIKTEPVDYEIKPIVVAS
GINCSAPLPNGVFSGVNALQATSSPQGVVQAVVLPTMGLVSPISINLSDIQNVLKMAVDG
NVIRQVLENNHANLTSKEQGTITSATLQQAGHSVISAFSLPLVDQDGTTKIIINYSLEQP
SQLSLVPQNLKKEVPAEVCKTEKLPEDLTIKTEKDTKFTEESTCTLCEDQPPDSNALQEP
KHYDQKSSTPLPESSKAESKSESSTVETADGNLTPSQPPLKNLLSLLKAYYALNAQPSAA
ELSKIADSVNLPQDVVRKWFEKMQNGEISLQSSRSSSPKADLDGSLPEKNTELQEDSNVE
NEDNDLQNPPNDDPSQPLAANGSESGTTSPSPLNLSSLKNSDGATVSDEVKGDQEQQMEP
LDLSLPKQLGTGLERPSITSVYQSSAYSVQEEPLNLCCIKKEPMQVDNVPISEPALIINP
SANPINIAIPTVTAQLPTIVAITDQNSVPCLRALAANQRTILIPQVTYTYATTSTATVSE
PQQKSLQANGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKLKKTENGLYACDLCDKIFQK
SSSLLRHKYEHTGKRPHECGICTKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSY
SQHMNHRYSYCKKEAEERDGTEHEEALHETLSNEHVDSQASPSQIDSDERESLTREDDSE
KEEEEDDDEKDTDDGQEEKESVEMHDLEETELEVEAGPLEGTLKDEECVDKSQTPEPEVT
ENHVSENDTAALP
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccccggcggaataacgtt
accagttacaacaatgtgttagacgcaaattctgattccgatgatgaagacaaattgcac
atcgtagaagaggagagtgttacggatgcggcagatggcgagggcgacttgccagaagat
gatttgccaaccgaccaaacagtattagcagaaggcagcgaaagtgtgaaacaaagttgc
tgggatgatgaagatggaacagacgcaaatgaaatcctggggcctgatgcagatgacatt
ggatgtacagacgctcacgatgaagaatgtgattcagatgttgaaaatgagcaaaaccat
gatccaaatgtggaagagttcctgcagcagagcgacacagccgtcatctatccagaagct
cctgaggatgaccagaggcaaggcacaccggaggccagtggtcaggatgaaaatggaact
ccagacgcattttcccagctcctgacatgtccgtattgtgacaggggatacaaacgttac
acttccttgaaggaacacatcaaataccggcatgaaaagaatgaagacaactttagttgc
tctatgtgcagctacacgtttgcctacagaacccagctggaccgtcacatgacatcccac
aagtcaggaaaagatcaaaggcatgtaacacagtctggtggaaacagaaaattcaaatgc
actgaatgtggaaaagctttcaaatacaaacaccatctaaaggaacatttacggattcac
agtggagagaagccatatgaatgcccaaactgcaagaagagattttcccattctggttcc
tatagttcccatataagcagtaaaaaatgtattggcgtaattccggtcaatggacgtgca
cgttccggtttgaagaccccccagtgctcctccccttccctgtctgcatcccctggcagt
ccagtacggccaccaattcgacaaaagatcgagaacaagcctttacaggagcaacttcca
ataaaccaaattaaaacggaacctgtggattatgaaattaagcctattgtggttgcgtca
ggaatcaactgttctgcccctttgccaaatggggtgtttagtggtgttaacgctctccag
gcaaccagttctcctcagggtgtagtacaagctgttgttctaccaactatgggcctggta
tcacctattagtattaaccttagtgacattcaaaatgttcttaagatggctgttgatggg
aatgtaatcagacaagtgttagaaaataaccatgccaatcttacatccaaagaacaaggg
actattacttctgcaaccttacagcaagcgggtcattctgtaatttcagcttttagtctt
cctttggttgatcaagatgggacaaccaaaataatcatcaattacagcttagagcagcca
agccagctttcacttgttccacagaacctaaaaaaagaagtcccagcagaagtctgcaag
actgaaaaattacctgaagatctaactattaaaactgagaaggatacaaagtttacggag
gagagcacttgcacgctttgtgaagatcagccaccagattccaatgcacttcaagaacct
aagcactatgatcagaaaagcagtactccacttcctgaaagtagcaaggctgaatccaag
tctgagtcttcaacagtggaaactgcagatggaaaccttacacctagtcaaccaccatta
aaaaacctcctatcacttctgaaagcctactatgcgctgaatgcacagccaagtgctgca
gaactttctaaaattgctgattctgtaaacctaccacaggacgtggtaagaaaatggttt
gaaaaaatgcaaaatggagaaatttctctccaatcttctaggtcatcttcaccaaaagct
gatctggatggtagcttaccagagaagaatactgaactgcaagaagacagtaatgttgag
aatgaagataatgatttgcagaaccccccaaacgatgacccctcccaaccattggctgca
aatggttcagagagtggcacaacctccccatcaccactaaacctctcttcgctgaaaaac
tcagatggtgcaacagtatccgacgaggtaaaaggtgaccaagagcagcaaatggaacct
ctcgatttatctttaccaaagcagcttggaactgggttggagcgaccttccataactagt
gtttaccagagcagtgcttattctgttcaagaagaacccttgaacttgtgttgtattaaa
aaagagccaatgcaagtggacaatgtcccaatatcggagccagctctaataataaaccca
agtgccaatcccataaacattgctattcccacagtcactgcccagttacctacaattgtt
gccatcacagatcaaaatagtgttccctgtcttagagcactagctgccaaccagcggact
atcttgattccccaagtgacatacacttatgccaccacttctactgcaacagtttcagag
cctcaacagaagagccttcaagctaatggaaatcaggatgaaaggcaagatacgagctca
gaaggagtttccaatgtagaagaccagaatgactctgactccactccacccaaaaagaag
ctaaagaagactgagaacggcttgtacgcctgtgatctctgtgataaaatatttcagaag
agcagttcgctgctgagacacaagtatgaacacacaggtaagaggcctcacgaatgtgga
atctgtacaaaggctttcaaacacaaacaccatttaattgagcatatgcgcctccattct
ggagaaaaaccctaccaatgtgacaaatgcggcaagaggttttcacactccgggtcctat
tcccaacacatgaaccaccgctactcctactgtaagaaggaggcagaggaacgtgatggc
acagagcatgaagaagcattgcatgagaccctgagcaacgagcatgtagattcccaagct
tctccgtctcagatagactctgatgaacgcgagagcttaacgcgagaagatgacagtgaa
aaagaagaagaagaagatgatgatgaaaaagatacagatgatggacaggaagaaaaagaa
agtgtggagatgcatgatttagaagagacggaactggaggttgaagcaggaccattggaa
ggtactttgaaggatgaagaatgtgtagataaaagtcaaaccccagaaccagaagtcaca
gaaaatcacgtgtctgaaaatgacactgctgccctcccttag
DBGET
integrated database retrieval system
