KEGG   Rana temporaria (common frog): 120940053
Entry
120940053         CDS       T07929                                 
Name
(RefSeq) integrin beta-1-A-like
  KO
K05719  integrin beta 1
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem03271  Virion - Rotavirus
rtem04145  Phagosome
rtem04510  Focal adhesion
rtem04512  ECM-receptor interaction
rtem04514  Cell adhesion molecules
rtem04530  Tight junction
rtem04810  Regulation of actin cytoskeleton
rtem04820  Cytoskeleton in muscle cells
rtem05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    120940053
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120940053
   04514 Cell adhesion molecules
    120940053
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120940053
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120940053
   04530 Tight junction
    120940053
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120940053
   04810 Regulation of actin cytoskeleton
    120940053
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    120940053
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtem04131]
    120940053
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtem04147]
    120940053
   04515 Cell adhesion molecules [BR:rtem04515]
    120940053
   04090 CD molecules [BR:rtem04090]
    120940053
Membrane trafficking [BR:rtem04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    120940053
Exosome [BR:rtem04147]
 Exosomal proteins
  Proteins found in most exosomes
   120940053
Cell adhesion molecules [BR:rtem04515]
 Integrins
  Integrin beta subunits
   120940053
CD molecules [BR:rtem04090]
 Proteins
  120940053
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin I-EGF_1 PSI_integrin EGF_2 vWA_SIBA-E
Other DBs
NCBI-GeneID: 120940053
NCBI-ProteinID: XP_040208568
LinkDB
Position
5:60164185..60240662
AA seq 823 aa
MFFLCLRGFLHGTLVSPTQAKDMTMVYKLIFMGLCLDSILYSNSQQSGTECLKANAKSCG
ECIQAGPNCGWCTKVDFLQEGEPTSARCDDLAALKRKGCSEEDIQNPRASKRTLKDNLIT
NKTKRNSMNSSEITQIRPQQLKFELRSGEPQTFNLTFRRAEDYPIDLYYLMDLSFSMKDD
LENVKNLGTALMEKMKQITSDFKIGFGSFVEKTVMPYISTTPAKLINPCTAEQQCTSPFS
YKNVLSLTSNGNLFNDLVGKQQISGNLDSPEGGFDAIMQVAVCGDHIGWRNVTRLLVFST
DAGFHFAGDGKLGGIVLPNDGKCHMQDNMYTMSHYYDYPSIAHLVRKLSENNIQTIFAVT
KDYQDIYKELAKLIPKSAVGTLSSDSNNVIQLIIDSYNSLFSELILENSKLPEGVTISYK
SFCKNGEIGTGENGRKCFNISLGDQVEFEITITAHKCPKKDQTETIKIKPLGFTEEVEIL
LKFICECDCQQFGTPDSPKCHFGNGTFECGACRCNEGRIGKECECSTHQVSSEDMDAQCR
KENSSEICSNNGDCICGQCVCNKRENPNEVYSGKYCHCDNFKCDRFNGLICGGNGVCKCR
VCECFLNFSGSACDCSEDISTCIASNGQLCNGRGTCECGRCKCADPKFHGQKCEMCQTCL
GVCAEQKECVQCRAFHKGEKQEWCDTQCAHFNLTMVDSRDKLPQPGQEDALTHCKEKDVD
DCWFYYTYSVNSSSEVYVHVVRDPDCPSGPKIVRIVAGVVAGIVLIGQALLLLWKFFIMI
HDKRECAKFEKEKMNAKWDADENPIYKSAVTTVVNPEYEGKLM
NT seq 2472 nt   +upstreamnt  +downstreamnt
atgtttttcctctgcttgcgtgggtttcttcacggtacgctggtttcccccacacaagcc
aaagacatgacgatggtgtataaactcatcttcatgggactgtgtcttgattcaatttta
tacagcaattctcagcaaagtggaacagagtgtttaaaagcgaatgccaaatcttgtgga
gaatgtatacaagctggaccaaattgtgggtggtgcacaaaagtggattttttacaagaa
ggtgagcccacatcggcacgctgtgatgatcttgctgcattgaaacgtaagggctgttca
gaggaagacattcagaatcccagagcaagcaagagaacgctaaaggacaaccttataaca
aataagaccaaaagaaattctatgaactcctctgaaattacacagatcagaccgcagcaa
ttaaaatttgaactaagatcaggagagccccagacatttaatttaacattcagaagagca
gaggattatcctattgacttgtattatcttatggacctgtcattttccatgaaagatgat
ttagagaatgtaaaaaatcttggcacagctctcatggagaaaatgaaacaaattacttca
gatttcaagataggttttgggtcttttgtagagaagacagtcatgccatatattagtact
actcctgctaaactcataaacccgtgcaccgccgaacagcaatgtaccagtccgttcagt
tacaagaatgtactcagcctcacaagtaatggaaaccttttcaatgacctagtaggcaag
cagcagatctctggtaatttggattccccagaaggtggatttgatgccatcatgcaagtc
gctgtgtgtggtgatcacattggatggaggaatgtcacacgcttgttggtgttttctacg
gatgctggcttccattttgctggtgatggcaagttaggaggaatcgttctgccaaatgat
ggaaaatgtcacatgcaagacaatatgtacacaatgagccattattatgactacccatca
atcgctcatttggtccggaagctcagtgaaaacaacatacagacaatctttgctgttact
aaggattatcaagatatttacaaggagctagcaaagctaatcccaaaatcagctgttgga
actttgtcttcagactctaataatgtaattcaactaatcattgattcctacaattcactg
ttttcagagcttattctagaaaacagcaaattaccagaaggtgtaacaatcagttataag
tcattctgtaagaatggagagattggaacaggagaaaatggaaggaaatgttttaatatc
tctctgggagatcaggttgaatttgagatcactataactgctcacaagtgccccaaaaag
gaccaaacagagaccattaaaattaaaccattgggatttactgaagaagttgagattctt
ctgaaatttatctgtgaatgtgattgtcaacagtttggaacccccgatagcccaaaatgt
cattttgggaatggtacatttgaatgtggagcctgcagatgcaatgagggtcgcattgga
aaagagtgcgaatgcagcacacatcaagttagcagtgaagacatggatgctcagtgcaga
aaagagaacagctcagagatctgcagtaacaacggagattgtatttgtggccagtgtgtg
tgtaacaagagggaaaatcctaatgaggtctactccgggaaatactgtcactgcgacaat
ttcaagtgtgaccgattcaatggattgatttgtggaggaaatggagtctgcaaatgcaga
gtttgcgagtgtttcctcaacttttctggtagtgcttgtgattgctcagaagatatctca
acatgcatagcatctaatggtcagctatgtaatggaagaggaacgtgtgaatgtggaagg
tgtaaatgtgcagatcccaaattccatgggcagaagtgtgagatgtgccagacctgtctt
ggtgtttgtgcagaacaaaaggaatgtgttcagtgcagagcatttcataaaggagagaaa
caagaatggtgtgatacccagtgtgcacatttcaaccttactatggtggacagccgtgac
aagttacctcagccaggacaggaagacgctctcacacactgcaaagagaaggatgtcgat
gattgctggttctactatacctactctgtaaattctagctctgaggtttatgtgcatgtt
gtgagagacccagattgtcccagtggccctaaaatagttcgaatcgttgctggtgtggtg
gctggaattgtacttattggacaggcattgttgcttttatggaagttttttataatgatt
catgacaaaagagagtgtgccaaatttgaaaaggagaaaatgaatgccaaatgggatgct
gatgaaaaccccatctacaagagtgcagtgacaacagtggtgaatcctgaatatgaggga
aaattaatgtga

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