Rana temporaria (common frog): 120940155
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Entry
120940155 CDS
T07929
Symbol
SNX13
Name
(RefSeq) sorting nexin-13
KO
K17925
sorting nexin-13
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
120940155 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120940155 (SNX13)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
DUF1664
Syntaxin_2
GIY-YIG
Motif
Other DBs
NCBI-GeneID:
120940155
NCBI-ProteinID:
XP_040208766
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All DBs
Position
5:89745876..89955931
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AA seq
958 aa
AA seq
DB search
MIPKASLSIWGWGSLGVVLFLITFGPFAIFYFAFYILCFVGGGFVVTLLFGKINSEKYLE
RCEHAFLPPTSAGIPRCLEEMKREARPIRIDRRVTGANMIDEPLQQVIQFSLRDYVQYWY
YTLSEDESFLLEIRQTIQNALVQFSARSKEVDWQPYFTTRLVDDFATHLRAFRKAQQRMA
EKEDQKKDAAEDFVDTFFEVEVEMEKLVCRDLICTSSKDEEGFLKDLCEVLLYLLLPPGD
FQNKIMRYLVREILSRGIILPLINLISDPDYINQYIIWMIHDSNCNYEAFMNVIKLSNNA
GELEAVRDKAAEELQYLRSLDTVGDDINTIKNQINSLLFVKKVCETRIQRLQSGKEIDTV
KLTANFGKLCTVPLDKILVHNVALQFFMDFMQQTGGQAHLFFWLTVEGYRVTAQQQLEVL
HSRQRDGKHQTNQTKDLLRSAALGVFDQYLSEKASPRVQIDDYLLAKLEEMLNNEDPTPE
IFDEVQRKVYDIMLRDEKFYPSFRHNALYVRMLAELDMLKEPSFKGSDDGDGESFNGSPT
GSINLSLDDLSNVSAEEVIQIHSFISDTGVCNEHGKTYALYTITVQRRLSDGIEDSWNTY
RRYSDFHDFHMRITEQFENLTSILKLPGKKTFNNMDKEFLEKRKTDLNSYLQILLSPELL
KAYPTLAAYILHFLENKPYNKGKGDFARKMDTFVNPLRNSMRNVSNAVKSLPDSLAESVN
KMSDNMGKMSERLGQDIKQSFFKAPILVPKTDSDPEHCRVSAQLDDNDDDNIPLRVMLLL
MDEVFDLKERNQWLRRQITSLLQQLIRATYGDTINRKIVDHVESMTSPDQVADYVKHFRD
SFWPNGILAETATRRDRSIRMRTRVAGKTKLLEIMPDELKHIIGAETARKGILRVFEMFQ
HTQLNRRLVYVFLEGFLETLFSQCKFRELFIKLHSRSERTRRYRQRQQPSHAPALQKR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaaaggccagcctttccatatggggatggggaagtcttggcgttgtgctcttc
ctaataacgtttgggccttttgctatattttattttgccttctatatcctttgctttgtt
ggtggtggttttgtggtcacgcttctatttgggaaaataaactctgagaagtaccttgag
aggtgtgagcacgcgtttcttcctccaacctcagctggaatcccccggtgcttggaggaa
atgaaacgggaagctagacctatcagaatcgacagaagagtcacaggcgccaatatgatt
gatgagcccctgcagcaagtaatacaattttccttgcgggactatgtccagtactggtat
tacacgctaagcgaggatgaatcatttctccttgaaatcaggcaaaccatccagaatgca
cttgttcaattttccgcccggtcaaaagaagtggactggcagccttattttaccacccgg
ttagtggatgactttgccacgcatctccgagcattcaggaaagctcagcagagaatggca
gagaaagaagatcaaaagaaagatgcagcagaagactttgtagatactttttttgaggtt
gaagttgaaatggaaaaactcgtctgccgagacctcatctgcacatcttctaaagatgag
gaaggtttcctaaaggatttatgtgaagttttactgtatttattgctacctcctggagac
ttccagaataagatcatgcgataccttgtgagggaaatcctttcacgaggaattattctt
cctttaattaacctgatcagtgatcctgattatattaatcaatatataatttggatgatt
cacgattccaattgcaactatgaggccttcatgaatgttattaaattaagcaacaatgct
ggagagttggaagctgtgagggacaaagctgctgaagaattgcagtatctgcgatcttta
gatactgttggagatgatatcaacactataaaaaaccagataaacagtttactgtttgta
aagaaagtatgtgaaacaagaatacagaggttgcagtctggaaaagaaattgatactgtg
aagttgactgcaaactttggaaaactttgcacagtccccctggacaaaattcttgtacac
aacgttgcactacagttttttatggattttatgcagcaaacaggagggcaggcacatctg
ttcttctggcttacagtagagggataccgggtgacggcacagcagcagctggaggtgttg
catagtcggcagcgagatgggaaacaccaaaccaaccaaacaaaggatcttttaagaagt
gctgcgcttggcgtatttgatcagtatttatcagaaaaggcatcacccagagttcagatt
gatgattatttattagcaaaactggaagaaatgttaaacaatgaagacccaacaccagag
atctttgatgaggtccagaggaaggtatatgacatcatgctgcgggatgaaaagttttat
ccctccttccgtcacaatgctctctatgttcggatgcttgcagagctggacatgttgaag
gagccgagctttaaaggatctgatgatggagatggagaatctttcaacggatcaccaaca
ggcagcataaatttgtcacttgacgacctgtcaaacgtcagtgctgaagaggtgatacag
atccattcctttatttctgacactggagtttgtaatgaacatggcaaaacctatgcactg
tacaccatcactgtccagcgacggctctcagatggcattgaagattcttggaacacctat
cggcgatacagtgactttcatgacttccacatgcggatcactgaacagtttgaaaatctt
accagtatcttgaagctgccaggaaaaaagacattcaacaatatggataaagaattttta
gagaaaagaaaaactgatttgaactcttacttacagatattgctaagccctgagttgtta
aaagcctacccaactcttgctgcttatatattacattttcttgaaaacaaaccttacaac
aaaggaaagggggactttgcccgcaagatggacacctttgtaaaccctctgcgcaattct
atgaggaatgtttccaatgctgtgaaatctttgcctgacagcttggcagagagcgtgaat
aagatgtctgacaatatgggcaaaatgtcagaaagactgggacaagatatcaagcaatca
ttctttaaggctccaattcttgtaccaaaaaccgattcagatcctgaacattgtcgagtg
tctgcacagctggatgacaatgatgatgacaatattccgttacgagtgatgctgttactc
atggatgaagtctttgacctgaaagaaagaaatcagtggttaagaagacagattaccagt
ctccttcaacagctcatcagggcaacatatggagacacaattaatcgaaaaattgttgat
cacgtggagtccatgacatctcctgatcaagtagcagattatgtgaagcatttcagagac
tccttttggccaaatggaatattggcagaaacagccacccgacgagaccgcagtatacga
atgcgcactagagtggcaggaaaaacaaagctgctggaaattatgccagatgaactgaag
cacatcattggggcagagacagcgcgaaagggcattcttcgtgtctttgaaatgtttcag
cacacccaactaaacagaagacttgtatatgtgtttttggaaggcttcctggaaacatta
ttttcacaatgtaaattcagagagctttttatcaaactgcattccaggtcggaaagaaca
cgacgatatagacagagacagcaaccttctcatgcacccgccttacagaaaaggtga
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