Rana temporaria (common frog): 120940180
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Entry
120940180 CDS
T07929
Symbol
TRA2A
Name
(RefSeq) LOW QUALITY PROTEIN: transformer-2 protein homolog alpha
KO
K12897
transformer-2 protein
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120940180 (TRA2A)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtem01009
]
120940180 (TRA2A)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtem03041
]
120940180 (TRA2A)
Protein phosphatases and associated proteins [BR:
rtem01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120940180 (TRA2A)
Spliceosome [BR:
rtem03041
]
Common components
Common spliceosomal components
SR proteins
120940180 (TRA2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
120940180
NCBI-ProteinID:
XP_040208800
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All DBs
Position
5:complement(92619827..92665999)
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AA seq
294 aa
AA seq
DB search
MSDAEGKKVETRVNIREEMEEFIPRMLKRRHPALEPSHLLKVLPVQKRKVGLVLAVDQRL
QNGLSLIPDQGQNLDHGPEDVTQKIFPLRSRSRSHRRRSKSRSYTPEYRRRRSRSHSPMS
NRRRHNGSRANPDPNMCVGVFGLSLYTTERDIREVFSRYGPLAGVNXVYYQRTGRSRGFA
FVYFERIEDSRAAMEHANGMELDGRRIAXTIQYQSERTHSPPPGIYMGRPTHSSSSGRRR
DYYDKDMTRGYDRYEEYDYSSSSRYSSSRRRSPSPYYSRYRSRSRSRSYSPRRY
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcggaagggaaaaaggtggagaccagagttaatattcgtgaagagatggaa
gagtttattccaagaatgttgaagagaaggcatcccgctctcgaaccaagtcacctactg
aaagtgctgcccgtgcaaaaacggaaagtcggtctcgttctcgcagtggatcaaaggctt
caaaacggtctgagtctcattcccgatcaaggtcaaaatctcgatcacggtccagaagac
gtcacacagaagatattcccgctccggtctcgctcccgttcacacagaaggcgctcaaag
agcagatcctacacaccagaatataggaggcggaggagccgcagtcactctcctatgtcc
aataggaggcggcataatggtagtcgggcaaacccagatcctaacatgtgtgttggcgtc
tttggcttgagcttgtacacaactgagagagatatcagagaggtgttttcacgttatggt
ccccttgctggtgtcaatngtgtgtattatcaacgaactggacgatcaagaggatttgcg
tttgtttattttgagagaattgaagattccagagcagcgatggagcatgctaatggcatg
gaactggatggccgaaggatcgcgtagactattcaataccaaagcgagcgcacacactca
ccacccccaggcatttacatgggacgacccacacatagcagtagcagtggacgtcgtcga
gattattatgacaaggatatgacccgaggctatgacagatatgaggaatacgactacagc
agcagcagcagatacagcagcagcaggagacgttcaccttctccatactacagccggtac
agatctagatcaagatcccgctcatacagtccaagacgttactga
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