Rana temporaria (common frog): 120940239
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Entry
120940239 CDS
T07929
Symbol
TBC1D5
Name
(RefSeq) TBC1 domain family member 5 isoform X1
KO
K18469
TBC1 domain family member 5
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120940239 (TBC1D5)
Membrane trafficking [BR:
rtem04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
120940239 (TBC1D5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF7615
Motif
Other DBs
NCBI-GeneID:
120940239
NCBI-ProteinID:
XP_040208891
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All DBs
Position
5:complement(103004857..103727894)
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AA seq
814 aa
AA seq
DB search
MQDPTPRTRHPLQSEEVGFDPLQCDIARHDGGTSVDDKRSNPASDSEQIFISYSKEWEEL
FVNSNYLATIRLKGINGQLRSSRFRSVCWKLFLNVLPQDRSQWITKTEELRTGYKKIKEI
HITNPRKAAGQQDLMINNPLSQDEGSLWNKFFQDKELRAMVEQDVKRTFPEMQFFQQENV
RRILTDVLFCYARENEDLLYKQGMHELLAPLLFILHCDHQAFMHASEAAQPSEEMKVLLN
PDYLEHDAYALFSNLMGSAEPWFSTYEQDSRKDKDAKISTLPFARPQDIGPSIAIVTKVN
NIQDYLLKKHDIELFMHLNRLEIAPQIYGLRWLRLLFGREFTLQDLLVIWDALFADSITL
DLVDYVFVAMLLYIRDALISSNYQTCLGLLMHYPPIGDIHSLILKALFLRDPKKNPKPIS
YQFHQNLDFYRARGVDLMNRSRANAKVAPININKVSSSLMNLGRKLISPAIPTGGAMSPM
TSPPNTNINHSVGKPSFSEVLPSQPVSEPTPHHALPPLQMPQNQRMMKSESMPVHLGKGQ
SSKNVTSSPSIENLPGGRDHTDSPPLSAGKKDSFFSNISRSRSHSKSQGKRESEEDLEAQ
ISFLQGQLNDLDAMCKYCAKIMNVHLGHIQDAILQEKLEREDKIQVSLAVLKQVKDILKG
SLRFNQSLLEAEENEEITIRDDHYCSNLQRKDERDGLAKEMQEAQCHKKVHLLEAEGDDS
GSTESRQSDDYILISKEGETGNCNAGSESAQKEPLQKNGGPSDKKPAAPSNPLTFPDPLM
GGHLSSGNLSSSPDDDSSNNSKDSDFTIVSPLDI
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatcccacacctagaacacgccacccattacagtctgaagaagttggatttgat
cctctacagtgtgatatagccagacatgatggaggaacatcagttgatgacaagagaagt
aacccagcctccgattcagaacaaatctttatatcatacagcaaagagtgggaagaactt
tttgtaaacagcaattatttggcaacgatacgtctgaaagggattaatgggcagctgaga
agcagcaggttccggagtgtttgctggaagctgtttctaaatgttttaccccaagacaga
agccaatggataactaaaacggaggagttaagaacagggtataaaaagattaaggaaata
catataacaaatcctcgaaaggctgctggccagcaggacttgatgataaacaatccactg
tctcaggatgaggggagcctctggaataagttttttcaagataaagaactacgagcaatg
gtggaacaagatgttaaaagaacgtttccagaaatgcagttctttcagcaggagaatgtg
cgaaggatccttactgatgtacttttctgctacgccagagaaaatgaagatttgctttat
aagcagggaatgcatgaattgttggcaccattattgttcatactccactgtgatcatcag
gcattcatgcacgcaagtgaagctgcacaacccagtgaagaaatgaaggtactgttgaat
cctgattacctggaacatgatgcatatgccttgttttcaaaccttatgggaagcgcagag
ccttggttctccacatacgagcaggattctcgtaaggataaagacgcaaagatctcaact
ttaccatttgcaagacctcaagacattggaccttctattgctattgtgacaaaggtcaac
aatattcaagactacctgctgaagaaacatgacatagaactatttatgcacctcaacaga
ctggaaattgcccctcaaatttatggattacgatggctacggctcttgtttggtcgggag
tttactctgcaggacctgcttgttatttgggatgctttatttgctgacagcattacatta
gatttggtggactatgtttttgtagccatgctgctgtatattagggatgcattaatctcc
agcaactatcagacgtgtctgggccttctgatgcattacccacccattggtgacatacat
tcccttattctcaaggctctgtttctgagagacccaaagaaaaatcccaaacctataagc
tatcagttccatcaaaatttagacttctaccgggcacgaggagtagacttgatgaacaga
tcacgggctaatgccaaggtggcacccataaatataaataaagtctctagcagtttaatg
aatcttggacggaaactaattagcccagcaattccaactggaggagcaatgagtccaatg
acctcaccaccaaataccaacataaaccatagtgttgggaaacccagtttttcggaagtt
ctcccaagtcaacctgtttctgaaccgacaccacatcatgctctaccaccactgcagatg
ccacaaaatcagcgcatgatgaaatcggagagcatgcctgtgcaccttggtaaaggccag
agctccaaaaacgtcacttcatctccgagcattgagaatttgcctggaggccgtgaccac
acagactcccctccgctgtcagccgggaagaaggattcctttttcagcaacatttcccgt
tctcgttctcacagcaaatcccaagggaaaagagaatctgaagaggaccttgaagctcag
atttcatttctccaaggacaactgaacgatttggatgcaatgtgcaaatactgtgcaaaa
attatgaatgtccatcttggtcatatccaagatgctatattacaagagaagctggaaaga
gaagataaaatccaggtgtctctagctgtactaaagcaggtaaaggacattttaaaagga
tcgctaaggttcaaccaaagccttcttgaagctgaagagaatgaggagataaccatcaga
gatgatcactattgctctaacctgcaaagaaaagatgaacgtgatggtcttgccaaggag
atgcaggaagctcaatgccataaaaaggtacacttgcttgaggcagaaggtgacgattct
ggaagtacagagagccggcaatcagatgattatatcctgatctccaaggagggtgaaacc
ggtaactgcaatgcaggctcagagtccgcacaaaaggagccattgcagaaaaatggaggt
ccatcagacaagaaaccagcggctccatccaatccactaaccttcccggaccctctaatg
ggtggacacctttcctctggcaatctaagttccagtccagatgatgacagcagcaacaac
agcaaggattccgacttcactattgttagcccactagacatttaa
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