Rana temporaria (common frog): 120940242
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Entry
120940242 CDS
T07929
Symbol
SATB1
Name
(RefSeq) DNA-binding protein SATB1 isoform X1
KO
K23225
DNA-binding protein SATB1
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120940242 (SATB1)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120940242 (SATB1)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
120940242 (SATB1)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120940242 (SATB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUTL
ULD
CUT
Homeodomain
DUF4944
Motif
Other DBs
NCBI-GeneID:
120940242
NCBI-ProteinID:
XP_040208898
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All DBs
Position
5:complement(104432568..104570384)
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AA seq
852 aa
AA seq
DB search
MDHSNEKTQGIEHSEMSNNVSDPKGPPAKIARLEQNGSPLGRGRAGSIGGKMQGVPLRHS
AHMMRSSIRKGNMLPVFCVVEHYENFIEYDCKEEHAEFVLVRKDMLFNQLIEMALLSLGY
SHSAAAQAKGLIQVGKWNPVPLSCVTDAPDATVADMLQDVFHVVTLKIQLHSCPKLEDLP
PEQWSHITVRNALKDLLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFGRWY
KHFKKTRDMMVDMDDELSQQNSNHVNFGQQPVPGTPEKPSSPVQHSMSSQPPVRTPLPNL
HPGLVSAPISPQLVNQQLVMAQLLNQQYAVNRLLAQQSLNQQYLNHPPPVSRSMNKPMEQ
QVSPNTEVSSDVYQWVRDELKRAGISQAVFARVAFNRTQIALPHAPMVDYFLASSRPLQG
FGPCISLDDVRTWWRMGKKTLRDQSSSAEDRGLLSEILRKEEDPKTASQSLLVNLRAMQN
FLQLPEAERDRIYQDERERSLNAASTMGPAPLISTPPARPPQNCSSSVKFDGDRLWTEVF
KSSKLPRLITVESQMALWAIEKVKAATIATERNGSLENCSMNINASIYDDIQQEMKRAKV
SQALFAKVAASKSQGWLCELLRWKEDPSPENRTLWENLSMIRRFLSLPQTERDVIYEQES
NAVHQHSERPSHMIHVSPEHIQQQQQQQQQQQQQPQPQQQPPPPQPPGPRLPPRQPTVAS
PAESEEENRQQTRPRTKISVEALGILQSFIQDVGLYPDEEAIQTLSAQLDLPKYTIIKFF
QNQRYYLKHHGKLKDNSGLEVDVADYEDEEMSKEFDGETQDKNISTLFSVKLEDNITGER
NTDITADLNNLS
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggatcattcgaacgagaaaactcaggggatagaacattcagaaatgtctaacaatgta
agcgatccaaaaggtccgccagccaaaatagcccgccttgagcagaatggaagtcctcta
ggaagaggaagagctggaagcataggaggaaaaatgcaaggggtgcctcttagacattcc
gctcatatgatgaggtccagtatccgaaaaggaaacatgcttccggttttttgcgtggtg
gaacattatgaaaatttcattgagtatgactgcaaagaggagcatgcagagtttgtattg
gttaggaaggacatgctttttaaccagttgattgaaatggctctactgtcccttggatat
tctcacagcgcagctgcccaagccaaagggctgatccaagttggtaaatggaatccagtt
ccactttcctgtgttacagatgctcctgatgccactgtagcagatatgctacaagatgtg
tttcatgtggtcacactgaaaatacaactacatagttgccccaaacttgaagacttgcct
cctgagcaatggtcccacataacagtacgtaacgctctgaaggacctgctgaaagatatg
aatcagagttcactggctaaggaatgtcctctgtcccagagtatgatttcttccattgtg
aacagcacttactatgcaaatgtctcagcagcaaaatgtcaagaatttggaaggtggtat
aaacatttcaagaagacaagagatatgatggttgacatggatgacgagttatctcaacaa
aattcaaatcatgtgaactttggtcagcagcctgtgcccggtacccccgaaaaaccttct
tctccagtacagcactctatgagcagtcagccacctgtccggacaccacttcctaacttg
catcctggacttgtatctgctcccatcagccctcagttagtcaatcagcagctggtgatg
gctcagttactgaaccagcaatacgcagtcaacagacttttagcccagcagtccttaaac
cagcagtacttgaaccaccctcctccagtcagtcgatcaatgaacaagcctatggagcaa
caagtctcacccaacacagaggtgtcttccgatgtctaccagtgggtacgcgacgaactg
aagcgggcaggaatctcgcaggcagtatttgcacgtgtggctttcaaccgaactcagata
gctctcccccacgctccgatggtggactacttcttggcttcctcacgtccattgcagggc
tttggaccctgcatcagtcttgatgacgtcaggacctggtggagaatggggaagaagacg
ctgcgggaccagtccagcagcgcagaggatcggggcttgctctccgaaatattaagaaag
gaagaagatcctaaaacagcatcacaatccctactggtaaatctgcgagcaatgcaaaat
ttcttgcagttgccagaggctgaaagagaccgaatttaccaggatgaaagagaaagaagc
ctcaatgctgcatccactatgggcccagctcctttgatcagcacacccccagcacgtcct
ccacagaactgctcaagttcagttaaatttgatggtgaccgtttgtggactgaagtcttc
aagtcatcaaaattaccacggctgatcacagttgaaagtcaaatggctttgtgggccatt
gagaaggtcaaggcagcgactattgcaacagagagaaacggaagcctggaaaactgcagc
atgaatattaatgcttccatttatgacgatatccagcaggaaatgaaaagagctaaagta
tcccaagctctatttgcaaaggttgcagcttccaaaagccagggctggttatgtgaactt
ctgaggtggaaagaagacccatcgccagaaaacaggactctttgggagaatctctccatg
attcgcaggtttctgagtcttccgcaaacagaaagagatgtgatttatgaacaagagagc
aatgcagttcatcagcatagtgaacggccatcacatatgatccatgtgtccccagagcac
attcagcagcaacaacagcagcagcaacagcaacagcagcagccccaaccacagcagcag
cctccaccacctcagccaccaggccctagacttccacccagacagcctactgtggcatct
ccagcggaatcagaggaagaaaaccgccaacaaacccgtcccagaacaaaaatctctgtg
gaggccttggggattttacagagcttcattcaagacgtcggactttacccagacgaagaa
gccattcaaactttatccgctcagctcgacctgcccaaatatacaattatcaagtttttc
cagaatcagcgctactatttaaaacaccatgggaagctgaaagacaattctggtttagag
gtagatgttgccgattatgaagatgaggagatgtccaaggaatttgatggggaaacccag
gacaaaaatattagtacactgttttctgtaaagcttgaagataatataactggagaaaga
aacacagacatcactgcagacctgaataacttgtcataa
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