Rana temporaria (common frog): 120940286
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Entry
120940286 CDS
T07929
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04621
NOD-like receptor signaling pathway
rtem05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120940286 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120940286 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rtem04054
]
120940286 (NOD1)
Pattern recognition receptors [BR:
rtem04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120940286 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_6
WHD_NOD2
LRR_4
AAA_22
NPHP3_N
Bac_DnaA
Peptidase_M9_N
AAA_16
PIF1
Motif
Other DBs
NCBI-GeneID:
120940286
NCBI-ProteinID:
XP_040208986
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All DBs
Position
5:117092034..117193830
Genome browser
AA seq
930 aa
AA seq
DB search
MAHQPMSSIQLLLKSRETLVKSIKNIKCLLENLRNYGYFSEEDAEFVLQCGTQADKVRQI
LDLVENKGEEAAEYFIYILQKVPEAYFDLIPWLKEIAFQASEQVKCLPVKNNDPVSLYSR
KLKQELCCDSKFIKSYTQKEEMMLQETYVDGVMELINAKNETMGRLGGLNSLFDDTGVIN
ELGETIFIFGDAGMGKTLLIQKMQNMWAKGHSFCNIKFFFRFRCRTFIFFTSSAELCLKD
LIFRYCCRPDNDAEEVFRYICKFPETVLFTFDGYDEIHSSFDINGVPEVSSPIDATHPAA
LLLHLLSGKLLKGSKKVLTARTGCPISANFVRKKIMLRGFSTDNLVEYTALFFKEANVRQ
CVLNHLQANHNFSSLCSIPLFCWIIFKSYQHFHSMNEDHEFSGSSVTLTDIFLLIIEVYL
NVSTKGKTVSRLEAFTGGKDTLLSIGRLAYNGMEKSVFIFDQEYIASNRILEKDLQLGFL
RPVEHYSGCGDSASFEFFHMTLQSFFTALCLVIDDRSSTTDLLKYFHHCKHLKIEEDRPS
LLSCVCASKEKRSDPFTNKDHFQFVNLFLCGLLSKPKQNLLKCLVPESVLKKKRKALKQH
LFKSVKSHLKKLPRAPFLEFSRVHALPHFIWMVRCISETQNEKVGKLAAKGICADYIKLS
FCDASSSDCGAISFVLNYYKKQFALELDNNNINDYGVKELIPCFNKLLVIRLSVNQIGDE
GVKVLAEELTKYKIIRFLGLYKNLITDLGARHVARIMEECPSLRHIKLGYNQFTAVGGIC
IGRALQRNTNIRDIGMWGNRIGDEGAQAFAEALRNHPNLTDLSLTFNEISTSGGISIADA
LQENKSLKVVWILQNQFNDEVAEHFARMLRVNKTLQNLWLQNNNITNHGANLLTEALDDN
INLEEICLQGNPLTPGENEPFERNARIRIN
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcacaccaacctatgtcttctattcagttacttcttaaaagtcgggaaacattagtt
aaatctatcaagaacattaagtgcttgcttgaaaatttgagaaactatggatacttttca
gaagaagatgctgaatttgtgctgcagtgtggaacacaggcggataaggttcgtcagatt
cttgatcttgtggagaataagggggaggaagcagccgagtattttatatacatccttcag
aaggtcccagaggcttattttgatcttattccttggctaaaggagattgcttttcaagct
tcagagcaagtgaagtgtttacctgttaagaacaacgaccctgtatcactatacagcaga
aaactcaaacaggaattgtgctgtgattcaaagttcataaagtcctacactcagaaagaa
gagatgatgcttcaggaaacatatgttgatggagtcatggaactaataaatgctaagaat
gaaactatgggccgtttaggaggtttaaattcattgtttgatgacactggggtgatcaat
gagcttggcgaaaccattttcatctttggtgatgctggtatgggaaagactcttttgatt
cagaaaatgcaaaacatgtgggccaaaggacactccttttgcaatataaaattctttttt
aggtttcgatgccggacatttatcttttttacatccagcgctgagctgtgtttgaaggac
ctgatcttcagatattgttgcaggccagacaatgatgcagaagaagtgtttcgatatatt
tgtaagtttccagagactgtattgtttacatttgatggctatgatgagattcattcaagt
tttgacataaacggtgtccctgaggtttcatcacccattgatgctacccaccctgctgca
ttactcttgcacttactaagcggcaagttgctaaaaggatcaaaaaaagtcctgacagca
aggacgggatgtccgatatctgcaaactttgtccgtaagaaaatcatgctgcgtggcttt
tctactgataacctggttgagtacactgccttgtttttcaaagaggccaatgtccgtcag
tgtgtgttaaaccatttgcaggccaaccacaatttcagcagcttatgttcaatcccttta
ttttgctggataatatttaagtcttatcaacactttcattccatgaatgaggatcatgag
ttttcaggcagttcagtgacacttacggacatctttctactaataattgaagtttattta
aatgtatcaactaaaggaaaaacagtaagccgacttgaagcctttacaggtggtaaggac
actttgttgtctattggacggcttgcctacaatggaatggaaaaatcagtctttattttt
gaccaagagtatattgcatcaaatcgcattcttgagaaggatcttcagctgggcttcctc
aggcctgtggaacactatagtggatgtggtgacagtgcttcgtttgaattttttcatatg
acactgcagtccttttttacagccttatgtcttgtcattgatgatcgaagtagtactaca
gatcttctaaaatatttccatcattgtaaacacctaaaaattgaggaagaccgtccttcc
ctgctttcctgtgtttgtgcaagtaaagaaaaacggagcgatccctttacaaataaggac
cacttccaatttgttaatctttttctttgtggactgctttcaaaaccaaaacaaaacctt
ttaaagtgcttagtaccagagtctgtcttaaagaagaagagaaaagctctaaaacaacac
ctcttcaaaagcgtcaaatctcacctgaaaaaacttcccagagcaccatttttagagttc
agtcgggttcacgcactgcctcacttcatctggatggtgagatgcataagtgagacacag
aatgagaaggtggggaagctggcagccaaaggaatatgtgcagattacataaaactcagt
ttttgtgatgcatcctcatcggattgtggagcaatctcctttgtgttgaactattacaag
aaacaatttgctttggagttggataataacaatataaatgattatggggtcaaagagctt
ataccatgcttcaataaacttcttgttatcaggctcagtgtcaatcagattggagacgag
ggtgtaaaagtattagctgaagaattaaccaagtataagatcattcgatttcttggtttg
tacaaaaatcttatcactgatttgggagctaggcatgtggcacgaatcatggaagaatgc
cccagtctgagacatatcaagctcgggtacaatcagtttactgctgttggaggtatatgt
attggacgggctttacaaaggaacaccaatattcgtgacattgggatgtgggggaatcgc
attggagatgaaggggcacaggcgtttgcagaggctttgaggaatcacccaaatctgaca
gatttaagtttgaccttcaatgaaatttccacttctggagggataagcatcgctgatgca
ttacaagaaaacaaatctcttaaagtagtttggattttgcagaaccaattcaatgatgag
gtagcggaacattttgctcgaatgctaagagtgaacaagacgcttcaaaatctgtggcta
cagaataacaacatcacaaatcatggagccaatctgttaactgaagcactagatgataac
attaatctggaggaaatttgtttacaaggcaacccactgacaccaggtgaaaatgaaccc
tttgaaagaaacgcaagaatacgcattaattga
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