Rana temporaria (common frog): 120940305
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Entry
120940305 CDS
T07929
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120940305 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120940305 (CNOT10)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120940305 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_14
TPR_2
TPR_19
TPR_12
ARM_TT21_N
TPR_8
ARM_TT21
ANAPC3
TPR_7
EMP24_GP25L
TPR_MalT
SCAF11-like_C
DUF6058
Motif
Other DBs
NCBI-GeneID:
120940305
NCBI-ProteinID:
XP_040209009
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Position
5:complement(120566571..120712980)
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AA seq
770 aa
AA seq
DB search
MAADKAGEQNTEKHEGSTNCSGISDQEKELSKSSFQAFTAGNYQACLQHLGELKEINKDD
YKIMLNMAVTEFYKSGQCTTDTLKQTLNQLRNEVHSAVDEMDSLDDVENSMLYHNQAVIL
YYLRQHMEAIAIGEKLYQFIEPFGMRLKIPRSSQHSSYGSCTTHSREEKFAHAVCFLLVD
MYLLTYQTEKALLLLVVLEKMILQGSNNNKNGKNEPNNNSNHKEASNMKAEAGAQLEAAK
SKIHQYKVRAYIQMKSLKACKREIKSVMNTSGNSTSSLFLKSNFEYLRGNYRKAVKLLNS
SNISEHPGFMKTGECARCMFWNNLGCIHFAMGKHNLGLFYFKKAIQENDNACAQLTSSNA
DPGKKFSGRPMCTLLTNKRYELLYNCGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRL
AECCIAANKGTSEQETKGLPSKKGIVQSIVGQGYHRKIILASQSVQNLLYNDGESSAIPV
ASMEFAAICLRNALLLLPEDLQEANKENGAKNNSQTGSTDSGGENNEGCSNKSHESDKFA
PSPPSSPLKRQELENLRCSILACSAYVALALGDNLMALNHADKLLQQPRLSGSLKFLGHL
YAAEALISLDRISDAITHLNPENVTDVSLGVSSNEQEQGNDKGENEPMESVGKPVPQCYP
SSVTSARTMMLFNLGSAYCLRSEYDKARKCLHQASSMIHPKEIPPEAILLAVYLELQNGN
TQLALQIIKRNQLLPSIKMMSDLRKKPLFQPIHQPMQPIQMPAFTTVQRK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagataaagcaggagagcaaaatactgaaaagcacgagggatctactaattgt
tctggaatctctgaccaagaaaaagagttgtccaagtcttctttccaagcattcacggca
gggaattatcaggcatgtcttcagcacctcggagaactgaaagaaattaataaagatgac
tacaaaataatgttgaatatggcagttacagagttttataaaagtggccagtgtactaca
gacactttgaaacaaacgctgaaccaattaagaaatgaggttcattcagctgttgatgag
atggacagtttagatgatgtggagaatagcatgctgtaccacaatcaagctgtcattttg
tattacctgcgccagcacatggaagccattgccattggagaaaaactttaccagttcatt
gaaccttttggcatgcgtctgaaaatacctagatcgtcacagcacagctcttatggatca
tgcacaacacacagcagagaggaaaagtttgcccatgctgtctgttttttgctggtggac
atgtacctgttaacgtaccaaactgaaaaagcattacttctgttggtagtactggagaaa
atgattttgcaaggcagcaacaacaataaaaatggtaaaaatgagccaaacaataactcc
aaccataaggaagcttctaatatgaaagcagaagcaggagctcaactagaagctgccaag
tccaaaatacaccagtacaaagtaagggcctacattcaaatgaagtctctgaaagcatgc
aagagagagattaagtctgtcatgaacacatctggaaattccacatcatcactatttttg
aagagtaattttgaatacctcaggggaaactatagaaaagctgtgaaactacttaactct
tcaaatatatcagaacatcctgggttcatgaaaacaggggaatgtgctcgatgtatgttc
tggaacaatcttggctgcatccattttgcgatgggaaaacacaatttaggactgttctac
tttaaaaaggctattcaggaaaatgacaacgcctgtgcacagttaacctcatcaaacgca
gatccagggaagaagttttcaggaaggcccatgtgtacattgttgaccaacaaacggtat
gagttgctgtataactgtggcatacagctcctacacatcgggcgaccactggcagcattt
gaatgtctaatagaagctgttcaggtttatcattcaaatccgcgtctctggttaagatta
gcagaatgttgtatagctgctaataaggggacttctgaacaagagacaaaaggcctacca
agcaaaaaaggaatagtacaatcaatagtaggccagggttatcatcgtaagataatcttg
gcctctcagtctgttcagaatctcctttacaacgatggggaatcatctgctattccggta
gccagcatggagtttgctgcaatatgtttaaggaatgcattactccttttaccagaggac
ctacaggaagctaataaagaaaatggcgcaaagaataacagtcaaacaggcagcacagat
tcgggtggggaaaacaatgaaggatgcagcaataaaagccatgaaagtgataaatttgca
ccttctccaccttcttctccactgaaacgacaagagcttgaaaatttaaggtgttccatc
cttgcttgtagtgcttatgttgctttggcattaggtgataaccttatggcattgaaccat
gcagacaaactacttcaacagccgcgattgtcaggatccctcaagtttctgggccatttg
tatgctgcagaagcactcatctccttggacaggatctcggatgccatcactcatttgaac
ccagagaatgtcacagatgtgtcccttggggtttcatcaaatgaacaggagcaaggaaat
gataaaggagaaaatgagcctatggaatctgtaggaaagccagtgcctcagtgctaccca
agttcagtcacttcagcccgtacaatgatgctcttcaatctgggaagtgcttactgctta
cgtagcgaatatgataaggcaagaaaatgtctccaccaggcttcttctatgattcatcca
aaagaaatcccaccagaggcaattctgctggcagtttacctagaactacagaatggcaac
acccagctggccttgcagattatcaaaagaaaccagcttctgccgtcaatcaaaatgatg
tcggatctccgaaaaaagccattattccagcccatccatcagccaatgcagccaattcag
atgccagctttcaccaccgtgcaaagaaaatga
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