Rana temporaria (common frog): 120940328
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Entry
120940328 CDS
T07929
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtem03037
]
120940328 (NPHP3)
Cilium and associated proteins [BR:
rtem03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
120940328 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_2
TPR_8
TPR_MalT
TPR_16
TPR_19
NPHP3_N
TPR_17
TPR_14
NACHT
TPR_3
KAP_NTPase
AAA_22
Uso1_p115_C
ARM_TT21_4th
AAA_19
AAA_16
AAA_14
FtsK_SpoIIIE
T2SSE
DUF2225
DUF4635
Motif
Other DBs
NCBI-GeneID:
120940328
NCBI-ProteinID:
XP_040209039
LinkDB
All DBs
Position
5:128064170..128179869
Genome browser
AA seq
1300 aa
AA seq
DB search
MGTASSMVSPGEVIEDTYGGGGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTASV
DLEYAAEYERLKKEYEIFRVSKNNEIASMQKKEVKLDEENKRLRAELQALQKTYQKNLRE
KESAVEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLETKLQRLQAQ
GIQVFDPGESDSDDNDTDVTVPGTQCDYWTSGALGSEPSMGSMMQLQQSFRGPEFAHSSI
DVEGPFANVNRDDWDVAVASLLQVTPLFSQAVWSNTVRCYLINTKDTQPEVDIFLREYSP
KLQRMCESLGYFFQVVHFPEECENHYTAVRKWEIEKSSLVLLFICSSLPSSLWEDCKEAF
LKNTEAKPRIVYHKIEDSSSGLDHMQQLIEQDQNKSNKAKIIDHSGDPDEGVYKTYCQVE
KVIKQDLLAAEISEPDSKDDTAIQEDDDFGDVLWDVHDEQEQMEAFQHASHSTCELGFDK
YYDRLNDLVAAPAPIPPLLITGGPGSGKSLLLSKWIQLQQKHSPNTLMLYHFVGKPMSTS
SEPALIIKRLTLKLMQHSWSVSSLSMDPGKFLEEFPHWLEKLSIRYQGNIIVIIDSIDQI
EQPEKHMKWLIDPLPVNVRVIVSVNVETCPQAWRLWPTLHLDPLNSKDVKALLNLECSGA
SIVLTKDQERKLEKHCRSATPCNPLYVTLLARFLIWAGIMGNITDTLQQCLQCQDTVSLY
RLGLRSVQEFMSSAKEKNYMREILCLISVSHNGVSECELTELCSGLTWPVLSFLVYHLHK
MVVLRYSCGLLQFQHLQAGEAVRMEYMQGGQNIVSEYREKLVQYFTVQLSHDRVTWRSAD
ELTWLYQQQGEKQKLHRCLMNLFVSQNLYKRGHFAELLSYWQLVGKDKTAMATEYIDALK
RHEKLCEGEESVTCLADLYETLGRFLKDLGLLNQAVIPLQRSLEIRETALDPDHPSVAQS
LHQLAGVYVQSKKFGNAEQLYKQALEISENAYGSEHLRVAWELDALAVLNQKQNKYEQAE
QLRKRSLRIRQKAARRKGSKYGFALLRRRALQLEELTLGKDTADNARTLNELGVLYYLQN
NLETAEMFLERSLEMRERVLGPDHPDCAQSLNNLAALYNEKKQYDKAEELYERALDIRKR
ALSPDHPSLAYTVKHLAVLYKRKGKLDKAVPLYELTVEIRQKSFGPKHPSVATALVNLAV
LFCQMKKQVEALPLYDRAMKIYEDSLGRMHPRVGETLKNLAVLRYEEGDFERAAELYKRA
MDIKEAETSVLGAKASSGHSSSGGDAHSLRNTVPVNILTE
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggggacagcatcgtccatggtcagccccggagaagttattgaagatacatatggcggt
ggagggggagaagcttgtgagattcctgtggaggtaaagcccaaggcacgccttctacgc
agttcttttagacgtggaccacgggtgattggggctagttttaaatccactgcatcagtg
gaccttgagtatgctgctgaatatgaacgcctgaagaaggaatatgagatctttcgggtc
agcaagaataatgagattgcttctatgcagaagaaagaggtgaaactggatgaggaaaat
aaaagactgagagcagagctacaggctcttcagaagacatatcagaagaacctcagagag
aaggagagtgcagttgaagctaaatatcaagctatggagagagctgctacttttgaacat
gatagagataaagtgaaaagacagtttaagatctttagagaaacaaaggaaaaagagatc
caggatttgcttagagccaagcgagaccttgaaaccaaacttcagagactacaagctcag
gggatacaagtgtttgatccaggagagtcagattccgatgacaatgacacagatgtgaca
gttcctggcacacagtgtgactattggacaagtggagccttaggaagtgagccctccatg
ggcagcatgatgcagcttcagcagtcttttcggggaccagaatttgctcacagttctatt
gatgttgaaggaccatttgccaatgtaaacagagatgattgggatgtagcagtagctagc
ttgctacaagtcacccctcttttctctcaggcagtgtggagcaacactgtacgttgttac
ctaatcaacactaaggatactcagcctgaagtagacattttcctaagagaatactctcca
aagctgcagaggatgtgtgaaagtttgggctatttctttcaagttgtccatttccctgaa
gaatgtgagaatcattacactgctgtacggaagtgggaaattgaaaagagttcccttgtc
ttattatttatttgttcctccttgcccagttcattgtgggaagactgtaaggaagcattc
ttgaagaatactgaggcaaaacctcggattgtgtatcacaaaatagaggacagcagcagt
ggtctagatcacatgcagcaattaatagagcaagaccaaaacaaatcaaacaaggccaag
atcattgaccacagcggggatcctgatgaaggagtttataagacctattgtcaagtggaa
aaggtcataaaacaggatttgttggccgctgagatatcggagcctgattccaaagatgat
acagcaatccaggaagatgatgattttggagatgtcctgtgggatgttcatgatgagcag
gagcagatggaggcttttcagcatgcatctcattcaacatgtgagcttgggtttgacaaa
tattatgatcgtttgaatgatttggtggctgctccagctcctattccacctctccttata
acgggaggaccaggctcagggaaatctcttctcctatcaaagtggattcagcttcagcag
aagcattcaccaaacactctgatgttgtatcactttgttggaaaaccaatgtctaccagc
tcagagcctgcactcatcataaaaagactgacccttaagctaatgcagcattcctggtcg
gtctcatcgctctcaatggatcctggaaagttcttagaagaatttcctcactggcttgaa
aaactttccattcgctaccaggggaacatcatcgtcattattgactccattgaccaaata
gagcaaccagaaaagcatatgaaatggctcattgatcctttaccagtgaatgtacgagta
attgtctcagtgaatgtggaaacttgtcctcaggcatggaggttgtggccaactcttcat
ctcgatccattaaactctaaagatgtgaaagcgcttttaaatcttgaatgcagtggagcc
agtattgtattgaccaaagatcaggaaagaaaactggaaaagcactgtcggtctgccaca
ccctgcaatcccttatatgttactttgctggctagatttctcatttgggctgggattatg
ggaaacattacggacactttgcagcaatgcttgcagtgccaggatacggtgtcactatac
agacttgggcttcgatctgtgcaggagtttatgtcaagtgcaaaagagaagaactacatg
agagagattctttgccttatcagtgtcagccacaatggtgtgagtgaatgtgaactgacg
gagctgtgctcaggattaacatggccagtattaagttttctggtgtaccaccttcataaa
atggttgtgttaagatacagctgtggtctgctccagtttcagcacttacaggcaggagag
gctgtgagaatggaatatatgcaaggaggtcaaaatattgtttcagagtacagagagaaa
cttgtgcaatacttcactgtacaactaagccatgaccgtgtgacatggaggagtgcagat
gagctcacttggttgtaccagcaacagggagaaaaacagaagctacacagatgtttaatg
aacctctttgtatcccagaatctctataaaaggggacattttgctgagctgctcagctat
tggcagcttgtgggtaaggacaaaacagcgatggctacagaatacattgatgctttgaag
cggcatgagaaattgtgtgaaggagaggagagcgtgacctgcttggcagacctctatgaa
acacttggaaggtttctcaaagaccttggtctcctcaatcaggctgtgatacctcttcag
cgctcactggagatccgagaaactgctctagaccctgaccaccccagtgtagctcagtct
ctacaccaacttgcaggtgtctatgtgcagtccaaaaagtttgggaatgctgaacagctg
tataagcaggctctggagataagcgagaatgcctacggcagtgaacacctgagagttgcc
tgggaactggatgctctggctgtacttaatcagaagcagaacaaatatgaacaagcagag
cagctgaggaaacggtcattaaggattcgacagaaagcagcaagaagaaaaggcagtaag
tatgggtttgcattattaaggcgtcgtgcgcttcagctggaggaactaacgctgggcaaa
gacactgctgacaatgctcgaacactgaacgaacttggcgttttgtattacttacagaat
aaccttgaaacagcggaaatgtttcttgaacgttcactggaaatgagggagcgggtttta
ggtccagatcatccagactgtgcccagtctctcaataatctggctgctttatataatgag
aagaagcaatatgacaaggcggaggagttgtatgagagagcattagacataaggaagaga
gctctgtctccagaccacccatctttggcttatacagtgaaacatttagctgtgctttac
aaaagaaaaggaaagctggacaaagctgtgcctctgtatgaactcactgtagaaatccga
cagaagtcttttggtcccaaacacccgagtgtcgctactgccttggtgaatcttgcagta
ttgttctgtcagatgaaaaaacaagtggaagctttacctctgtatgaccgagccatgaag
atttatgaggacagcttgggacgaatgcacccccgggttggagaaacactaaagaacttg
gctgtactaaggtatgaagaaggtgactttgaaagagcagcagagctgtacaaaagagcc
atggacattaaagaagcagagacatctgtgttgggggctaaagcctcctctgggcactcc
tccagcgggggagacgcacatagcctcaggaacactgtaccggtcaatatcttgactgaa
tga
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integrated database retrieval system
