Rana temporaria (common frog): 120940473
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Entry
120940473 CDS
T07929
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120940473 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120940473 (TRIP13)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
120940473 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
nSTAND3
AAA_16
Viral_helicase1
ATPase_2
AAA_14
AAA_18
AAA_24
AAA_25
AAA_5
IstB_IS21
AAA_33
Cytidylate_kin
AAA_28
TIP49
NPHP3_N
bpMoxR
ABC_tran
RuvB_N
NACHT
TsaE
RNA_helicase
AAA_7
DUF815
AAA_11
AAA_30
ATPase
AAA_17
SLFN-g3_helicase
PduV-EutP
Mg_chelatase
AAA_19
Rad17
NTPase_1
PhoH
AAA_3
ResIII
CPT
Motif
Other DBs
NCBI-GeneID:
120940473
NCBI-ProteinID:
XP_040209302
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All DBs
Position
5:complement(169701012..169841172)
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AA seq
432 aa
AA seq
DB search
MDEAAMELKQALPIDLESLQIYVEVHQKSNSTAKTEEIRTCVLQLLNRHCVVFGDYSWTE
FDDVFLTKNVNSVAIVDTELKVKDRQPIDLGKCSIFVNVFHLNEEGPSSENLEEDSESLV
AADNWILPAAEFHGLWESLIYDSEIKSNLLDYVTTTLLFSDKNVDSNLIAWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSYRYRYGQLVEINSHSLFSKWFSESGKLVTKMFQKIQELI
NEKDVLVFVLIDEVESLTAARNASRAGTEPSDAIRVVNAVLTQIDHIKRYPNVVILTTSN
ITEKIDMAFVDRADIKQYIGPPSKAGIFNIYVSCIEELMKCQIIYPRQQLLTLRDLEMIG
YVENNVSKLSLLLNDISRKSEGLSGRVLRKIPFLAHALFMQSPTVTLEKFLQALSLAVER
QFEERKTLKEST
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagcggcaatggagttaaaacaagctcttcctattgatttagaatctcttcaa
atttatgtagaagttcatcaaaaatcaaatagcactgcaaagactgaagaaataagaact
tgtgttctacagctgttaaataggcactgcgttgtgtttggtgattattcttggacagag
tttgatgatgtgtttttaacaaagaatgtcaattcggtggccattgtagatacggagtta
aaagttaaagaccgacagcctattgatcttggcaagtgcagtatatttgtaaatgttttt
catttaaatgaagaaggtcccagttcagaaaatctggaagaagatagtgagagccttgtg
gcagctgacaactggattttgcctgctgctgaatttcatggactatgggagagtttaata
tatgacagtgaaataaagtcaaatcttttagattatgttacaaccacgctgctgttttcc
gacaaaaatgttgatagcaacttgattgcctggaacagagttgtccttttacatggccca
cctggaacaggaaaaacatcattgtgtaaagcactggcgcaaaagctgactatcagactg
tcctataggtacagatatggtcaactcgtagagattaacagtcacagccttttctcaaag
tggttttcagagagtggcaagctggtaacgaagatgtttcagaagattcaagaactgata
aatgaaaaagatgttttagttttcgtattgattgatgaggttgaaagccttacagctgca
cgtaatgcttctagggcaggtaccgaaccttctgatgccattcgtgtagtaaatgccgtt
ctgactcaaatagatcatatcaaaaggtaccccaatgtagtcatcttgacaacttcaaac
ataactgaaaaaattgacatggcttttgttgacagagcagatataaagcagtacattggg
ccaccatccaaagcaggcattttcaatatttatgtgtcctgtatagaggaactcatgaag
tgtcagataatttatcccagacagcagctacttactctgagagatctggaaatgattggc
tatgtggaaaacaacgtatccaaacttagtttgttattaaatgatatttccagaaaaagt
gaaggtctaagtggcagggttctgagaaaaattccctttctggcacatgcacttttcatg
caatctcctacagttacacttgaaaaattccttcaagctctgtcacttgcagtggagcga
caatttgaagaaagaaaaacactcaaggaaagcacttaa
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