Rana temporaria (common frog): 120940540
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Entry
120940540 CDS
T07929
Symbol
IRX2
Name
(RefSeq) iroquois-class homeodomain protein IRX-2 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120940540 (IRX2)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120940540 (IRX2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
120940540
NCBI-ProteinID:
XP_040209398
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All DBs
Position
5:195375337..195381876
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AA seq
508 aa
AA seq
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MSYPQGYLYQPPGSLALYSCPAYGASALAAPRSEDLARSSSGSAFSPYPGSAAFSAQTAT
GFSSPLSYSGDPAGFPSYVGSPYDAHTAGMTGAISYHPYGSPAYPYQLNDPAYRKNATRD
ATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRN
KSEDEDDDDGDGERGKEDHSDKIQDNNETSAEDEGISLHVDSLTDHSCSAESDGEKLPCR
AGDHLCESGTESKDKYEDEEDEEDLDEENRSLPPKPVTSSPLTGIEAPILNHQHEGSPRS
SNKAILDNRISPTSQTQASKPKLWSLAEIATSDIKHQNIGQSCQPSTVSSATSSSVSHNS
AYPSSSILGRHIYYTSPFYSNYTNYGNFNALQSQGILRYNSATMTTSEALNQTVLSSNSL
HKHTSNDCLKTASNQIDQHYRSASYDSKKGRCHNCLEKKNLSKPSSLPELISKTYLNPDH
ILCHCIKEDTQSTIKSTDFPPYVFIFKQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttatctctaccagcctcctggctccttggctctctactcctgt
ccggcttatggggcctcagcgctggccgccccgaggagcgaagatctggccagatcctcg
tccggctccgcgttcagtccttacccgggatccgcagccttcagcgcccagacggccact
ggcttcagcagcccgctgtcctactctggtgaccccgccggattcccctcctacgtgggt
tctccatacgatgcacatacggctggcatgacaggggcaatcagctatcatccatatggc
agcccggcttatccctaccaattaaatgaccccgcttatagaaaaaatgctactagggac
gctacagccacgttaaaggcctggctgaatgagcacaggaagaacccttaccccaccaag
ggcgagaagatcatgttggccatcatcaccaagatgaccctcacccaagtctccacgtgg
tttgccaatgccaggaggaggctgaaaaaggagaacaagatgacctgggcacctcgcaat
aaaagtgaggacgaggatgacgatgatggagatggagaaagaggcaaggaggatcattct
gataagatccaggataacaatgagacctcagcagaggatgaaggtattagtttgcacgtt
gactcattgactgaccactcttgttctgctgagtctgatggagaaaagttaccttgcaga
gctggagaccatctttgtgaatcaggcactgaatccaaggacaaatatgaggatgaagag
gacgaggaagacttagatgaagaaaacaggagtctccctcccaaacctgtgacctcctca
cccctcacaggcatagaggcaccaatccttaatcaccagcatgaggggagccccagatct
tctaacaaagccatcttggacaataggatttccccaacttctcagacccaggccagcaaa
cccaaactttggtccctggctgagatagccacctcagacattaaacatcagaatataggg
cagagctgccagccgtctactgtatcctctgccacctcttcatcagtatcccacaactct
gcctacccttcctcttcaatcctgggaaggcacatctactatacatcgcctttttatagc
aactatacgaactatggaaatttcaatgctctccaaagccaagggatcctgagatacaat
tcagccaccatgactaccagcgaggcactaaatcaaactgttttaagcagcaactctcta
cacaaacacacaagcaatgactgtctaaaaactgccagcaaccagatagatcagcactac
aggtcagccagctatgactctaaaaaaggtaggtgtcacaattgcttagaaaaaaaaaac
ctcagcaagccatcttctctccccgagctaataagtaaaacgtatctaaatccggatcac
atcttgtgccactgtataaaagaagacacacagagcactattaaatctacagactttccc
ccctatgtttttatttttaaacaataa
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