Rana temporaria (common frog): 120940624
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Entry
120940624 CDS
T07929
Symbol
CDH20
Name
(RefSeq) cadherin-20
KO
K06807
cadherin 20, type 2
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtem04515
]
120940624 (CDH20)
Cell adhesion molecules [BR:
rtem04515
]
Cadherins
Major cadherins
120940624 (CDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Cadherin_2
TAS2R
Motif
Other DBs
NCBI-GeneID:
120940624
NCBI-ProteinID:
XP_040209514
LinkDB
All DBs
Position
5:233798559..234294630
Genome browser
AA seq
790 aa
AA seq
DB search
MQHLKNCAQQGLYIYYMVLLDFAAGFGISSQLMKQKDEKSENKPFPHHRLKRSWVWNQFF
VLEEYTGTDPLYVGKLHSDMDEGDGSIKYILNGDGAGTMFTIDDTTGDIHAIQRLDREER
AQYTLRAQALDRRTSRPMEPESEFIIKIQDINDNEPKFLDGPYTASVPEMSPVGTSIIQV
SATDADDPTYGNSARVLYSILQGQPYFSVDSKTGIIRTALTNMDREAREYYEVIIQAKDM
GGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQMNVLESAPVNSTVGRVLAMDQDEGVNA
EMKYTIIDGDGLEMFDVATDATYQVGVITVKKPLDFESKKSYTLKIEGSNPHVEVRFFNL
GPFRDTTTVHITIEDVDEPPVFESRHYFVEVSENVDIGTTIKIVAAKDPDATNNSVRYSI
DRNSDPGRYFYVDITTGALMTARPLDREELAWHNITILAMEMNNPAQIGSVPVTIKVLDV
NDNAPVFTKFYETFMCENAKAGQLIQTLSAIDQDDPPEGQHISYSLPPEGANNPNFTLRD
NQDNTAWILTRKSGFKQSEQNMFYIPVLVLDNGRPMLSSTGTLTIQVCSCDEDGDIMSCS
AEPYTLPISLSRGALIAILACIFVLLVLVLLILSMRRHRKQPYTIDEEDNVHENIVRYDD
EGGGEEDTEAFDITAFWNPREVHVGKNRQDMQPEIESLSRYVPQTCMVDNNVHSYMLAKL
YEADTDICAPPFDSLQTYMFEGDGSVAQSLSSLQSLSTDSDQSYDYLTDWGPRFKKLAEM
YGTKDSTSSL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatttaaagaactgtgcccagcaagggttgtatatctactacatggtgctgctg
gactttgcagctggatttggaatttcaagtcaactgatgaaacaaaaggatgaaaaatct
gagaacaagccgtttccccatcaccgactgaaaagaagctgggtatggaaccagttcttt
gttctggaagagtatacaggaacagacccgctgtatgttggcaagcttcactcagacatg
gatgaaggtgatggctcaattaaatatattctaaatggcgatggggcaggaaccatgttt
actattgatgacactacaggtgacattcatgcgatacagcgactggatcgggaagagagg
gcccaatatactctcagagcccaggctctggacagaaggactagcaggcctatggagcca
gaatcagaatttatcataaaaattcaagatattaatgacaatgaacccaaatttcttgat
ggaccttacacagcttctgtaccagaaatgtccccagttggtacctctattatccaagtg
tcagcaacagatgcagatgatcctacctatggaaatagtgcaagggtgttgtacagtatt
ctccaagggcagccatacttctctgtggactccaaaacaggcataatcagaacggcgtta
acaaatatggatcgagaagcaagagaatattatgaagtcattatccaggccaaagatatg
ggaggacagctgggaggattagctggaacaaccactgttaatatcaccctcagcgatgtg
aatgacaatcctccaagatttcctcaaaaacactaccaaatgaatgttttagaatcagcc
cctgttaattcgacggttggaagggttctagcaatggatcaggatgaaggagtgaatgca
gaaatgaagtacaccatcatagacggcgatggacttgagatgtttgatgtagcaacagat
gctacataccaagtgggagttattacagtaaaaaagccgctagactttgaaagcaagaaa
agctacacactaaagattgaaggttccaacccacacgttgaagtgcgcttttttaactta
ggaccatttcgtgataccaccactgtacacattactatagaagatgttgatgaaccacca
gtgtttgagtcacgtcattattttgtagaagtctcagaaaatgttgatatcgggactaca
ataaaaatcgttgctgcaaaggacccagatgcaacaaacaactcagtcagatattctatt
gacagaaacagtgatcctgggagatatttctatgttgacattactacaggagcattgatg
acagcaaggcctttggatagggaagaactggcatggcataatatcacaattttagcaatg
gagatgaataatccagcacagattggaagtgttccggttacaataaaagtactagatgtc
aatgataatgctccagtattcaccaaattctatgaaacttttatgtgtgaaaatgcaaaa
gctggacagctgattcagactttgagtgcaatagaccaagatgatcctccagaaggccaa
catatatcctacagcctgcctccagagggagccaacaacccaaattttacattaagggat
aaccaagataacactgcttggatcttaaccaggaaatctggcttcaaacagtctgaacag
aacatgttttacatccccgtcttagtactagacaatgggaggcccatgttgagcagtact
ggtactctaacaatacaagtttgcagctgtgatgaagatggtgacataatgtcctgcagc
gctgaaccatatacattacccataagcctcagcagaggggcattaattgcaattcttgct
tgcatatttgtgttattagtgttggtgcttcttattttatcaatgagaagacacagaaaa
caaccgtacactattgatgaagaagacaatgtccatgaaaacattgtaagatatgatgat
gaagggggaggagaagaagacacagaggcatttgacattacagctttctggaatccaagg
gaggtccatgttggaaaaaataggcaggacatgcaaccagagattgaaagcttgtcccgt
tatgtgcctcagacctgtatggtggacaacaatgttcacagctatatgttggctaagttg
tatgaagcagacacagacatttgtgctccaccttttgactctcttcaaacttatatgttc
gagggagatggctcagtggctcagtcactaagctcactacagtctttaagtacagactct
gatcagagctatgattatcttactgactggggtccacggttcaaaaagcttgctgagatg
tatggaaccaaggatagcacttcatctttgtga
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