Rana temporaria (common frog): 120940739
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Entry
120940739 CDS
T07929
Symbol
ATXN1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120940739 (ATXN1)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
120940739
NCBI-ProteinID:
XP_040209690
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Position
5:complement(256887833..257291527)
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AA seq
799 aa
AA seq
DB search
MKSNQERSNESLPPKKREIPATSRPSEEKTVGLTNENHRTDSLSWLSTTASSHGGRHHGP
VGTSVEAGLQQGVGLHKTISTGIDYSPPSAPRSVPAATTVSALYQTVQSQSGASVSPIQY
PNVPQTFQFIGTPSSGQLYGDFISPQLVSPTSNSASIAVSSTASVVSTPSQRSQMEAYST
MLANVSSLSQQGHKGEPHLLRTPGLISAGSPPIQSSHYVHNLSSSQSGVRNMSPPTIPVH
LHTHPVIPHTLTLGTSPQVVVRYSDSGAHFIARDPSKKEDSFRSQAKELLNGEIEKVRRF
LVPSSTDAHLMKAGNNKPASQHYETRHVVMHPSTEFGARDPSGVRTSVMVVPNSNPAATD
YDIQQTIKRETSPSIAHNKGSLHLGKPSHRSYALSPQQTLCAESVKTMATLSPHTVIQTT
HSAAEQLSVGLPAAAFCAGTQQPVIGYLSSQQQTIGYPGNLPQHLVIPGTQPLLIPVGNP
DIEPSGVGVAPAIVTSSTQFAAVPHTFVTTPIPKSDNYSAELLATQAAYQTTLVPAQIHL
PLVQSVASPMAAAPTLPPYFTKGSIIQLANGELKKVEDLKTEDFIQSADISNDLKIDSST
VERIENSHSPGIAVVQFAVGEHRAQVSVEVLIEYPFFVFGQGWSSCSPERTSQLFDLPCS
KLSVGDVCISLTLKNLKNGSIKKGQPMDPAGILLKHPKNDSLSGNRHRYAEHENGINQGS
VQVSSENGELRCPAGLNAVSFEAKTEPGKPTTTRKRRWSAPESRKLEKSEDEPPLTLPKP
SFIPQEVKISIEGRSNVGK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctaatcaagaaaggagcaatgaaagcctgccaccgaagaaacgtgaaattccc
gccaccagtcgaccttctgaagaaaaaacagtcggattgacaaatgaaaaccaccgtaca
gatagtttatcatggctttccaccacagccagcagccatggtggacgtcatcatgggcct
gtaggaacttcagtagaagctggtttacaacagggggtaggtttacataaaacaatttca
actggtatagactattccccccctagtgctccaaggtcggtaccagcagcaacaacagtt
tctgccctttatcaaactgtgcagtctcagtcaggggcatcagtgtctcctatacaatat
cctaatgtgccccaaacgttccagtttattggaacgccgtctagtggacaattgtatgga
gacttcatcagtccacagctagtttcacctacatcgaattctgcatcaattgctgtatcc
tcaacagcatcagtagtctccactccatcacaacgttcccagatggaggcgtattccact
atgttggccaatgtaagcagcttaagccagcagggccataaaggtgaaccgcatctactt
cggactccaggattgatttcagcaggatctccacctatacagtcgagtcactatgtgcat
aatttaagctcatcacagagtggagtcagaaatatgtcaccaccaactatcccagtccat
ttacatacccacccagtgattcctcatacacttaccctgggtacttccccccaggtggtt
gtgcggtactcagattcaggagctcattttattgctagggacccttcaaagaaagaagat
agtttcaggtcacaagccaaggaattattaaatggggagatagagaaagttaggagattt
ttagtcccttcctcaacagatgcacatctaatgaaagcaggcaataataaaccagcttcc
caacattatgagacaaggcatgtagtgatgcacccaagtactgagtttggtgctcgggat
ccctcaggtgttcggacctctgtcatggtggtgcccaacagcaaccctgctgccacagac
tatgatattcaacaaaccattaagagagaaacctcaccctcaattgctcataacaaggga
agcttacacttaggaaaaccatcccaccggtcctatgctttatccccacaacagacttta
tgcgcggaaagcgtgaaaaccatggccactttatctcctcacactgtcatccagacaact
catagtgcagcagagcaactttctgttgggctgcctgctgcagccttttgtgcgggtaca
caacagccagttattggctatctcagcagtcagcagcaaaccattggttaccctggaaat
ttgccacagcacttggttattccaggcacacagcccttgctaataccagttggcaatcca
gacattgaaccatctggggtaggggtagcacctgctattgtcacttcatcaacccaattt
gcagcagtgcctcatacatttgtcactacgcccattcctaagagtgataactacagtgct
gaattattggcaacgcaagcggcctaccagaccacattggttccagctcaaatacacctt
ccactagtacagtccgttgcttctccaatggcagctgctcccacactgcccccttatttc
acaaaagggtcaatcattcagctggccaatggggagctaaagaaggtagaagatttaaaa
acggaagacttcatacagagcgccgatattagcaacgacttgaaaatagactccagcaca
gttgaaaggattgagaacagccatagtccaggcattgctgtggttcagtttgctgttgga
gaacatcgagcacaggtcagtgtggaagtcttgatagaatatccattttttgtgtttggt
caaggctggtcatcatgcagtcctgagagaacaagccagctctttgatttgccatgttcc
aagttgtcggtaggagatgtctgcatatcgcttacactcaaaaatttaaaaaacggctct
ataaagaaggggcaacccatggatccagctggcatcttgctgaagcacccaaagaatgac
agtctgtctggaaatagacataggtatgcagaacacgagaatgggattaatcagggaagt
gtacaggtttcatctgagaatggagaactaaggtgtcctgctggattgaatgccgtgtcc
tttgaagccaaaacagaacctggtaagcccacgacaacaaggaagaggaggtggtctgcc
ccagaatcacgaaaattagagaaatctgaagatgaaccaccattgactcttcccaagccc
tcttttattcctcaggaggttaagatttccattgagggtcgatctaatgtagggaagtga
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