Rana temporaria (common frog): 120940745
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Entry
120940745 CDS
T07929
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03013
Nucleocytoplasmic transport
rtem03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120940745 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120940745 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120940745 (NUP153)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120940745 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Nucleoporin_FG
CBP4
Motif
Other DBs
NCBI-GeneID:
120940745
NCBI-ProteinID:
XP_040209700
LinkDB
All DBs
Position
5:complement(258225193..258358557)
Genome browser
AA seq
1452 aa
AA seq
DB search
MAAAGGGGDGLGTGGKIRSRRYHQSSARTPYTKTRQQNQQGIISRVKDTVKSIVPTWLQN
YFNSVEESQEVTRQTIEPEEHVETQNDVENDHFEDNESLPPFGRAAPEPVRIQSDPATNP
LMLNIPDVLTRPSLHRANLNINIFDSPALNCQPSTSGFSLVKEVKDSASLHDDDNISTTS
GFSSRASDKDVAITKTGTVPLLWSPEADRTHNVSQNSPFNLKKPAFNPSAFSSFLPNSSR
LGDSPFYAGKTTYGGAAAACQSRARSTPYRVPVKKQVVAKPAHVTYGVTSLAARRILQSL
EKMSSPLADAKRIPSVSSVSPLAPERSFSGESLSKRKKVESSFPPVQKLVTPQSISVSSS
LRKIRPSLASMQSNANSCRTPNSDKHKEKINREPDVIPQQTSFSYPAFSTPASNGFGSTK
GGGKMMRERGSTKPSEEEVEVPCLPEIPLPISMTALPKFSLNIEQRTSPLPVRQPVSTKA
SDEVNIGEKLCTISADAPDFNFSQPVVKSVSSSDESAASPVGFTFRAPALKTSSLHENAK
SMLSSSEIPLKVKASIVINSSTKKAEEEQATSFCKPAQSLKEGSVLDILRSPGFQSTSSL
QTGTPAKSSVSSPKLLTFGQSSKQALGIWYCDCCLLENKASDSKCVACSTVKEQAKEVTK
STTLATTTPTKNTSPLKCTFGFGDKFKVAPGTWDCDTCLVQNKQESSKCVACGSPKPGTG
AKDPLLLPTTKPDKPVIPPDRGLTLSPSLKFEELARKPVGSWECTVCCVQNKAEDNECVA
CTSPKPGVSTASATTSFPASLPATQREPQGFGKSSFSSESTFPPVKFGLPPSDTGDQKSS
SSTDSSSTNKVSFSFTFGQSSKTLDEKKDKDYSFATSTGTSNTVSPPFKFGFAGSAPAEK
DSGVKLTTDFQFGTNPSKPESSSNANLVGLSAKEKSVIAPFVLKEPEDKKTEAPLAGGFT
FGKLDQKESSSSFVFGKNGEKTESTPAATSFGSKSDGEQSKTFLFGKPEAGKADTSTLGS
FAFGAPNPMEKKEADQPAKPAFAFGASATETGSSKPVFGFQGSGSSSATQSSSIGSSSSV
FGSVPQTSSSNVFGSAVQSNTATSAGVTTPAPSSTVLSSATSLTAPTGSNNMFGGALSSN
TPAGSSNIFGSAPATGTPTSSSIVFGNVASVNTSSASNVFGSAAPTSTSASSNTLFGNSS
ASTNPSSVPFVFGQTTTTAGGSVFGSGNESKSTFVFAGQESKPAETPASTAPAAVTPFMF
GASAPAPAATGFTFGGTNTSNSTGTSSTPFVFGAGQPAPPASGLAATSSVPTFGKTVAQT
NAPAFGVPVSGSLFPSGSQTVPSFGSLTSNVQSPAFGQQSAQPNFGSSAAPPPGGAFPFG
GSNFNFGGASSTGVFTFGSNSVANPAQPANTGFPFNQTPSFNQTPSFNLGSNGKTTPQIA
NRKIRTARRRKN
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcaggaggaggaggagacggcttaggcacgggaggtaaaattcggagccgg
cggtaccaccagagttctgcaaggaccccgtacaccaaaacccgccagcagaaccagcag
ggtatcattagccgagttaaagatacagtaaagagcatagttccaacttggttacaaaat
tattttaacagcgtggaagagtcgcaagaggttactcggcaaacaattgaaccagaggag
catgtggaaacgcagaatgatgttgaaaatgaccattttgaagataatgagagtctccct
ccttttggcagggctgccccagaacctgttaggattcagtctgacccagccacaaatcca
ttgatgttaaatattcctgatgtactaacaagaccttcattacatcgggccaatctcaac
attaatatttttgactctccagcacttaattgccagccttctacttctggcttttcacta
gtgaaagaagttaaggattctgcctctttacatgatgacgacaacatttccacaaccagt
ggtttttcttctcgggcatctgataaagatgttgcaattacaaaaactgggactgttccg
ttactgtggtctcctgaagctgatcgaacacataatgtttcacaaaactcgccattcaat
ttgaagaaacctgcatttaatccatctgccttttcctcatttttacctaattcaagtcga
cttggcgattcccccttttatgcgggcaagacaacttatggaggtgcagctgcagcttgt
cagtccagggcccgcagcactccatatcgggtgccagtgaaaaaacaagttgtggcaaaa
cctgcccatgttacatatggtgtaacaagtctagctgcacgtcgcatactacaatcctta
gagaaaatgtcaagcccattggcggatgcaaagagaataccgtcggtgtcttctgtttca
ccattggcaccagagagaagtttctcaggagaaagtttgtctaaaagaaagaaggtggag
tcgtccttccccccagtacagaagctagttacaccgcaatctatttctgtatcctccagt
ctgagaaaaatcagaccttcccttgcatccatgcagagcaatgcaaacagttgcagaaca
ccaaattctgacaagcacaaggaaaaaattaatcgtgaacctgatgtaataccacagcaa
acgagtttttcataccccgccttcagtaccccagcatcaaatggcttcggttcaacaaaa
ggtggaggcaaaatgatgagggagcgtgggtcaacaaagccatcggaggaggaggtagag
gttccctgtctacctgaaatacccctcccaataagcatgactgcgcttccaaaatttagt
ttgaacattgaacagaggacttcaccacttcctgttagacaaccagtttccactaaggca
agtgatgaggtgaatattggtgaaaagctatgtaccatttctgctgatgctccagacttt
aacttttcacagccagttgtgaaatctgtcagctccagtgacgagtccgctgcatctcca
gtgggtttcacctttagagcaccagctttaaagacttcttcactgcatgaaaatgctaaa
tccatgcttagcagttctgaaatcccattgaaagtgaaagcatctattgtgataaatagc
agcacaaagaaggctgaggaagaacaagcgacaagtttttgtaagcctgcgcaatcatta
aaggaaggaagtgtgctagatattctgcggagcccaggtttccagtctacaagttctctg
caaactggaactcctgctaaaagttctgtttccagcccaaagcttttgacgtttgggcag
agcagcaaacaggccttggggatatggtattgcgattgctgcttgcttgagaacaaggct
tcagacagtaaatgcgtagcttgcagtacagtgaaagagcaagccaaggaagtcacaaag
tctactactttggcaacaaccacacctactaaaaacacatctcctttgaaatgtacgttc
ggatttggggacaagtttaaagtggctccagggacatgggattgtgatacatgtttagta
cagaacaaacaggagtcatcaaaatgtgtggcttgtggatctccaaaacctggaactggg
gcaaaagatcccttactacttccaacaacaaagccagataaacctgttataccacctgac
cgtggccttacattatcgccaagtcttaaatttgaggaactagcaagaaagcccgtagga
tcatgggagtgtacagtgtgttgtgtgcagaataaagcagaggataacgaatgtgtggcc
tgcacttctccaaagccaggtgtgtcaactgcatcagcaactacgtccttcccagcctct
ctgcccgctacccaaagggaaccacaaggttttggaaagtcctccttttcttcagaatct
acatttccacctgttaaatttggactgcctccaagtgacactggagaccagaaatcaagt
tcctccacagactcctcaagtacgaataaagttagcttttcgttcacatttggtcaaagt
tctaagacattagatgagaaaaaagacaaggattactcttttgcaacaagcactggcact
agcaacactgtttccccaccttttaagtttggctttgctggttctgctcctgcagagaag
gatagtggtgttaaattgacaacggactttcaatttggaactaatccttccaaacctgag
agctctagtaatgctaatttagttggtctatctgctaaggaaaaatctgtcatcgcacca
tttgttttaaaggagccagaagataaaaaaacagaggctcctttagcaggtggtttcaca
tttggtaaactagaccagaaggaatcgtcttcatcttttgttttcgggaaaaacggagag
aaaactgaatctacccccgctgcaacctcatttggttccaaaagtgatggagaacagtca
aagacatttttgtttggtaaacccgaggcaggcaaggctgatacttcaacgctcggttca
tttgcatttggtgcgccaaaccccatggaaaagaaggaagcagatcagccagcaaaacca
gcctttgcatttggtgcttctgctacagaaacaggttcttcaaagccagtgtttggcttt
caagggagtggatcctcgagtgccactcaatctagtagtattggaagttccagcagtgta
tttggcagtgttcctcagacaagttctagtaatgtatttggcagtgctgtacagtccaac
acagctacttcagctggtgttactacccctgcaccttctagtactgtgttaagcagtgca
acttcattgaccgcacctactggttctaacaatatgtttggtggggccctgtcttcgaac
actcctgcaggttctagcaatatatttggaagtgctccagctacagggactccaaccagt
tccagcattgtttttggcaacgtggcctctgtgaatacatcaagtgctagcaatgtgttt
ggaagtgcagctcccacaagcacttcggcaagttccaatactttatttggcaattcaagt
gcatctaccaacccctccagtgtaccctttgtgtttgggcagactactactacagcaggt
ggctctgtgttcggcagtggcaatgaatccaagtcaacgtttgttttcgctggccaagag
agtaaaccagcagaaacgcctgcaagtacagctccagctgctgttactccttttatgttt
ggtgcaagtgctccagcaccagctgctactggctttacctttggcgggacaaatacctcc
aattcaacaggtaccagctcaactccatttgtctttggagcaggtcaaccagccccacct
gcatctggccttgctgctaccagttctgtaccaacatttgggaaaactgttgcccagact
aatgccccagcttttggtgtacctgtgtctggttcattgtttccttctggttctcagact
gtcccaagttttggatcgttgaccagcaatgtacagtccccagcttttggacagcaaagc
gctcagcctaattttggatcctctgcagctccccctcctggtggtgcctttccatttgga
ggttcaaactttaactttggtggtgcaagctcaacaggagtatttacttttggttcaaat
tctgttgctaacccagcacagcctgcaaatactggatttccatttaatcagacaccatca
tttaatcagactccatcgtttaatttggggagtaatgggaagacgacaccccaaattgct
aatcggaaaattaggactgctagacgaagaaaaaattga
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integrated database retrieval system
