Rana temporaria (common frog): 120940799
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Entry
120940799 CDS
T07929
Symbol
NFATC1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04010
MAPK signaling pathway
rtem04020
Calcium signaling pathway
rtem04148
Efferocytosis
rtem04218
Cellular senescence
rtem04310
Wnt signaling pathway
rtem04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120940799 (NFATC1)
04310 Wnt signaling pathway
120940799 (NFATC1)
04020 Calcium signaling pathway
120940799 (NFATC1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120940799 (NFATC1)
09143 Cell growth and death
04218 Cellular senescence
120940799 (NFATC1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
120940799 (NFATC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120940799 (NFATC1)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
120940799 (NFATC1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
120940799
NCBI-ProteinID:
XP_040209784
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All DBs
Position
5:complement(269278788..269550282)
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AA seq
938 aa
AA seq
DB search
MPRTSVAAAAPSSLPFGPFLQACSRDTVEFQPFFPFIMKSAEEEHYNYASSNISASLSLS
VMNPSLQTSCHGLQSSNPVISIIPSASHSSVYGGNLETETSGYYLSPNLRPNGAPLESPR
IEITSCLGMHSSNNQFFHEGDVEESIPNVKRTHSTATLTLPNVDNYRDPSCLSPASSLSS
RSCNSEASSFESNYSYPYTSPQTSPWQSPCVSPKTTDPEEGYQRSMVTCNLLNSPRHSPS
TSPRTSISEENWLAAPNSRPTSPCNKRKYSINGRQTSYSPHHSPTPSPHNSPRVSVTDET
WLGNTHQYTSSAIVAAINALTTDPIDMNDDIPSKARKTDYSIPLKTEPICDEHGTLSPSA
DLSPEDYSGFHHIRKGNYCDQYLSVPQHSYQWAKPKNISPTSYLSPSLPALDWHLPSQSG
PYELQIEMQPKSHHRAHYETEGSRGAVKASTGGHPIVQLHGYLESEPLTLQLFIGTADDR
LLRPHAFYQVHRITGKTVSTTSHETIISNTKVLEIPLLPENNMKAIIDCAGILKLRNSDI
ELRKGETDIGRKNTRVRLVFRVHIPQPNGRTLTLQAASNPIECSQRSAQELPLVEKQSID
SFPVIGGKKMVVSGHNFHQDSKVIFVEKAPDGHHVWEMEAKTDKEMYKPNSLVVEIPPFR
NQRISSPVQVNFYVCNGKRKRSQYQQFTYLPANVPIIKTEPTDDYESAQTCGPVNQGLTQ
LSKPYYSQQILMPSDPGSCLVSGFTSCQQRNTVMTSSNSSHKLHDLSSSPYNKCISNTGH
SQLGLQQPTGGVPTIQEVPRSIVVHPSSPDQSSHIMLQPQVSLHQSSSCPLGYQQTVYPN
SPSSPVPSITQEPSYLQPCSPTHSSVMGQPPHQQQKVQRNESPTTQPLSLPELHEDNNHN
LAPIPVTIKCEPEELDQLYLDDVNEIIRNDLSINNVHS
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcactagtgtagcagctgccgctccttccagtcttcctttcggtccgttcctg
caagcctgctccagagacactgtggagttccaacccttcttcccattcatcatgaagtca
gcggaggaagaacactataactatgcatcttccaatataagtgccagcctgtcactgagt
gtgatgaacccttcattacaaacttcatgccatggtcttcaatcatcaaacccagtcatt
tccattattccatcagcaagccattcatcggtatatggagggaatcttgagactgaaacc
tcgggatactacttatctccgaatttaagacctaatggagcaccattagagagccctaga
attgaaatcacatcctgtttagggatgcatagtagcaataaccagttctttcatgaagga
gatgtggaagaatcgatccctaatgttaagcgaacacattcaactgcaacgctgaccttg
ccaaatgttgacaactatcgagatccatcttgcttgagtccagcaagcagtttgtcttcc
agaagctgcaattccgaagcttcctcttttgaatcaaattactcttatccatatacttcc
cctcagacgtctccatggcagtcaccgtgtgtctctcccaaaaccactgacccagaggaa
ggctatcagagaagcatggtcacctgtaatttgctgaactctcccaggcattccccatcc
acttctcccaggacgagtatttcagaagaaaattggcttgcagctccaaactcacgtcca
acatctccatgcaacaaaagaaaatacagcattaatggcagacagacttcttactcacct
catcactctccgactccatcacctcacaattctcccagagttagcgtcactgatgagacc
tggttgggaaacactcaccagtatacaagttctgcaattgtggcagcaattaatgctctc
accactgacccaatagacatgaatgatgacattccatctaaagccagaaaaacagactac
agcatacctctaaaaacagagcccatttgtgatgaacatggcacattgtcaccatctgct
gacttgtcaccagaagactattccggattccatcacatcaggaaaggcaattactgtgat
caatatctgtcagttccacagcattcttaccaatgggccaaaccaaagaacatatcccct
acatcctatttgagcccctctctgccggcccttgattggcatctgccatcccagtcagga
ccttatgaactgcaaattgaaatgcagcccaaatctcatcacagagctcattatgagacg
gaaggaagccgaggggcggtgaaagcatcgacgggaggccatcccattgtgcagctacac
gggtatttagagagcgagccactcaccctccagctgttcatcggcacggcagacgatcgc
ctgctgcgacctcatgctttctatcaagtccatcgcatcactggcaagaccgtttcaacg
acaagccatgagaccatcatctccaacaccaaagttttggaaatcccactgctgcctgag
aacaatatgaaagctattattgactgtgccggtatactgaagctgcgcaattctgacatt
gagttgcgaaaaggggaaaccgacattggaagaaagaacactagagtgcgtctggtgttc
cgagttcacattccacaacccaacgggagaacgctgacgctgcaagcggcatccaatcca
attgagtgctcccagcggtctgctcaggaattgcctttggtagaaaagcaaagtattgac
agcttcccagtgattggagggaagaaaatggttgtgagtggccacaacttccatcaagat
tccaaagtcatttttgttgaaaaagctccagatggacatcatgtatgggaaatggaagca
aagacagataaagaaatgtacaagccaaattcgctagttgtggagatcccaccgtttcgc
aatcagagaatatccagcccagttcaagtcaatttttacgtctgtaacgggaagaggaaa
agaagccagtaccagcaattcacctatctaccagccaatgttccaattataaaaacagag
cccactgatgactatgagtcagctcaaacttgtggcccagtgaaccagggattaactcaa
ctctcaaagccatactacagccaacagattttgatgccatctgatcctggttcgtgcctt
gtgtctggcttcacatcttgtcagcaaagaaacactgtgatgacatcttccaattcaagc
cacaagctccatgacctatcatcttcaccgtacaacaaatgcatctcgaatactggccac
tctcagctaggacttcagcagcccactggaggcgttcccaccatacaggaagtgccacgg
tctattgttgtgcacccaagttcacccgatcagtcatcccacatcatgctgcagccgcag
gtgagtctccatcagagcagtagctgtccccttggttatcaacaaacagtctatcccaac
agtccctcttctccagttccatctattacccaagagccatcctatttgcagccctgcagt
ccaactcattcatcagtaatgggccaaccgccgcaccaacagcagaaggttcagagaaat
gaatctccaaccactcaacctctgtcactgccagagttgcatgaggacaataatcataat
ttggcccctattcctgtaaccatcaagtgtgagcctgaggaactggatcagttgtacttg
gatgatgtaaatgaaataataagaaatgacctctcaatcaacaatgtccattcatag
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