KEGG   Rana temporaria (common frog): 120940936
Entry
120940936         CDS       T07929                                 
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
  KO
K15623  protein SSXT
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120940936 (SS18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rtem03036]
    120940936 (SS18)
Chromosome and associated proteins [BR:rtem03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    120940936 (SS18)
   GBAF(ncBAF) complex
    120940936 (SS18)
SSDB
Motif
Pfam: SSXT
Other DBs
NCBI-GeneID: 120940936
NCBI-ProteinID: XP_040210025
LinkDB
Position
5:complement(305042548..305101058)
AA seq 440 aa
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQPLLPALPTPNMPMGPAGMNQSGTPQPPRSHNMPSEGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQHNMSSSSMTMPSNNHGSMGGYNHAVPSSQNMPVQNQMS
LSQGQSMGNYGPRPSMNMQPNQGPMIHQQSPSQQYNLPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGEQYSHGGQGTPEGINQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSPHYYEGGNAQYAQQQETYQGPPQQQGYPSQQQQQQQQQQQQQ
YAGQQGYPPQQQGYGPSQSGPGPQYPNYPQGQGQQYVQYRPSQPGPPQAQQQRPYGYDQE
SLHVNQRCMLQQIQIVQKHE
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgtcggtggcatttgcagctccccggcagcgggggaagggggagataaccccggctgct
atccagaagatgttggatgaaaataatcacttaattcagtgtattatggactatcagaac
aaaggaaaaacttctgaatgttcacagtatcagcaaatgttgcacacaaatttggtttac
ttggccaccattgcagactccaatcaaaatatgcaacctttattaccagcactacctaca
ccaaacatgcctatgggtccggcaggaatgaatcagagtggcactccacagccaccacgt
tcacacaacatgccttcagaaggaatggtaggagggggcccgcctgcaccacacatgcag
aaccagatgaacggccagatgcctggacccaaccatatgcctatgcaaggaccaggacca
aaccaacacaacatgtcaagtagttcaatgactatgccttcaaataatcatggttccatg
ggaggatataaccatgctgtgccatcttcacaaaatatgccagtccagaatcagatgagc
ttgtctcaaggccagtcaatgggaaactatggtcccagaccaagcatgaatatgcagcca
aatcaaggtcccatgatacaccagcagtctccctcacagcagtataacttgcctcagggt
ggtggacagcattaccaagggcagcagccacctatgggtatgatgggtcaagttaaccaa
ggaaatcacatgatgggtcaaaggcaaattcctccatacagacctccacagcaaggtcca
cctcagcagtactcaggccaagaagattattatggtgaacagtatagtcatggtgggcaa
ggaactcctgaaggcataaatcagcaatactatccagatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttacgaggattcctcaccacat
tactacgaaggaggtaatgctcaatatgcacaacagcaggaaacctatcaaggtccacca
cagcagcagggatacccatctcagcagcagcagcagcaacagcaacagcagcagcaacag
tatgctggccagcaaggatatccaccccagcaacaaggatatggtccttcacaaagtgga
ccaggtcctcagtaccctaactatcctcagggacagggtcaacagtatgtgcaatacagg
ccttcacagccaggacccccacaggcacaacagcaaagaccttatggatacgatcaggaa
agtcttcatgtgaatcaacgctgtatgttgcaacaaatacaaatagttcaaaagcatgag
taa

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