Rana temporaria (common frog): 120940936
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Entry
120940936 CDS
T07929
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120940936 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120940936 (SS18)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120940936 (SS18)
GBAF(ncBAF) complex
120940936 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
120940936
NCBI-ProteinID:
XP_040210025
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All DBs
Position
5:complement(305042548..305101058)
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AA seq
440 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQPLLPALPTPNMPMGPAGMNQSGTPQPPRSHNMPSEGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQHNMSSSSMTMPSNNHGSMGGYNHAVPSSQNMPVQNQMS
LSQGQSMGNYGPRPSMNMQPNQGPMIHQQSPSQQYNLPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGEQYSHGGQGTPEGINQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSPHYYEGGNAQYAQQQETYQGPPQQQGYPSQQQQQQQQQQQQQ
YAGQQGYPPQQQGYGPSQSGPGPQYPNYPQGQGQQYVQYRPSQPGPPQAQQQRPYGYDQE
SLHVNQRCMLQQIQIVQKHE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcatttgcagctccccggcagcgggggaagggggagataaccccggctgct
atccagaagatgttggatgaaaataatcacttaattcagtgtattatggactatcagaac
aaaggaaaaacttctgaatgttcacagtatcagcaaatgttgcacacaaatttggtttac
ttggccaccattgcagactccaatcaaaatatgcaacctttattaccagcactacctaca
ccaaacatgcctatgggtccggcaggaatgaatcagagtggcactccacagccaccacgt
tcacacaacatgccttcagaaggaatggtaggagggggcccgcctgcaccacacatgcag
aaccagatgaacggccagatgcctggacccaaccatatgcctatgcaaggaccaggacca
aaccaacacaacatgtcaagtagttcaatgactatgccttcaaataatcatggttccatg
ggaggatataaccatgctgtgccatcttcacaaaatatgccagtccagaatcagatgagc
ttgtctcaaggccagtcaatgggaaactatggtcccagaccaagcatgaatatgcagcca
aatcaaggtcccatgatacaccagcagtctccctcacagcagtataacttgcctcagggt
ggtggacagcattaccaagggcagcagccacctatgggtatgatgggtcaagttaaccaa
ggaaatcacatgatgggtcaaaggcaaattcctccatacagacctccacagcaaggtcca
cctcagcagtactcaggccaagaagattattatggtgaacagtatagtcatggtgggcaa
ggaactcctgaaggcataaatcagcaatactatccagatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttacgaggattcctcaccacat
tactacgaaggaggtaatgctcaatatgcacaacagcaggaaacctatcaaggtccacca
cagcagcagggatacccatctcagcagcagcagcagcaacagcaacagcagcagcaacag
tatgctggccagcaaggatatccaccccagcaacaaggatatggtccttcacaaagtgga
ccaggtcctcagtaccctaactatcctcagggacagggtcaacagtatgtgcaatacagg
ccttcacagccaggacccccacaggcacaacagcaaagaccttatggatacgatcaggaa
agtcttcatgtgaatcaacgctgtatgttgcaacaaatacaaatagttcaaaagcatgag
taa
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integrated database retrieval system