Rana temporaria (common frog): 120940952
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Entry
120940952 CDS
T07929
Symbol
RNF125
Name
(RefSeq) E3 ubiquitin-protein ligase RNF125
KO
K12170
E3 ubiquitin-protein ligase RNF125 [EC:
2.3.2.27
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120940952 (RNF125)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120940952 (RNF125)
Enzymes [BR:
rtem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120940952 (RNF125)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120940952 (RNF125)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_C2HC_14
zf-Di19
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
Prok-RING_4
RING_XB3-XBAT31
TRAF3_RING
zf-RING_10
zf-Nse
WCCH
zf-rbx1
zf-UDP
U-box
DUF7501
Motif
Other DBs
NCBI-GeneID:
120940952
NCBI-ProteinID:
XP_040210049
LinkDB
All DBs
Position
5:310747794..310784069
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AA seq
224 aa
AA seq
DB search
MGSVLSSEGSREHKAPVIEDPNPNYDCAVCLEVLNRPMRTRCGHVFCHTCIKASLRNNAY
ACPYCRTHLSSEGTLAVDIMKKMKTVFQNCEECDEKICLSEMRAHMNRCQQYITKYGPLE
ELGKKTCRALRYTCPYCPVEVDEEGLVQHCLNFHNTENRLVVCPVCHLVPGGDSSYDSSF
LKHLYTRHSMYFENYIDINIVEEALIERVIDLSMIHYIRHSNRS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgggatcggtgctgagcagcgaaggaagccgggagcacaaagccccggttatagaagac
cccaatcccaactacgactgtgccgtgtgcctggaggtcctgaaccggccgatgaggact
cgctgtggccatgtgttttgtcacacctgtattaaagctagtttgaggaataatgcgtat
gcctgtccatattgccgcactcacttgtcatctgaaggaacgcttgccgtggacatcatg
aagaagatgaagactgtttttcagaattgtgaagagtgtgatgaaaagatttgcctgagt
gaaatgagagcacacatgaataggtgtcagcaatacattacaaaatacggccctctggaa
gagctggggaaaaaaacatgcagagcgctacggtatacatgcccatattgcccagtggag
gtagacgaagaaggtctagtgcagcactgtttgaacttccacaatacagagaatagactg
gtggtgtgtccagtttgtcacctggtgccaggaggggactccagctatgattcaagtttt
ctaaagcatctttataccagacattcaatgtactttgaaaattacatagatataaacata
gtggaagaggctcttattgaaagagtaatagatctctctatgatacactacataaggcac
tctaacagatcctaa
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