Rana temporaria (common frog): 120940988
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Entry
120940988 CDS
T07929
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120940988 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtem01009
]
120940988 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120940988 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
rtem03029
]
120940988 (RB1CC1)
Protein phosphatases and associated proteins [BR:
rtem01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120940988 (RB1CC1)
Membrane trafficking [BR:
rtem04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120940988 (RB1CC1)
Mitochondrial biogenesis [BR:
rtem03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120940988 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
120940988
NCBI-ProteinID:
XP_040210127
LinkDB
All DBs
Position
5:complement(319170221..319404312)
Genome browser
AA seq
1585 aa
AA seq
DB search
MKLYVFLVNTGITLTFDTELAVQTVTDLKHAIQTKYKIAVQHQILVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPVIPRTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTHSYQKLLFKFENAYSKYLQ
SIDDIKVKLTNLGTAVSVMAKIPLLECLTRHSYRMCLDRFLSSAEGDVVELGNEKTAELV
QCDDVTKLKNMALLASLTTSVEHITQEVHDNRIEQDTMDSSGQDIDLSEGHLSNEGPPFN
VSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFSGECRQTVAKLDNQNMKAIKGL
EDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHANQLMIMLT
NHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKIQALFRLLMELLERVKI
VEALSTVPQMYCLAVVEVVRRKMFIKHYREWANALVKDGKSLYENEKAKRETFGKLFRKS
YLRNRLFRGLDSWPSSFCTRKPRKFDSELPDISVNDLQFLQSLCPPEVQLFLRVPLLCDL
EPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKVSNGQVSPQSATTPRIESATEATTT
TSSKSPSLSLQGPICPSVSIPAPLEELSPDSIDSHTFDFETIPHPHIEQSLKQGSLDLDS
LADSPESDFMSAVNEFVIEENPVSPNISDTQSPEMMVESLYSSVINAIDSRRMQDTKGSK
DNSAENISLKACVNRCKVVAQESQANLRNFRKELCQLKILVQREQSEFASAIKSVSAEIL
KMIQHVNVSLETTLKEKHFEELQLLQKSYEKRLQLSKEDLNVNEEVIKQLKSNITGLKED
LQTKQMEVAAVRSENETFLHLQNERDQKMIHVESAMREQTYEMQKLKETRETTLEDLNKL
YTENEEKLRLLKEEFKILEQTHLKELEDHLELRHAQELEDVKVEYKCCIEKLQLENKQKL
DQLQESCAAIAKDKDSQLQELNLRISELSDIRCKLEVELALKEGEIDEIKVNMEENKAQQ
QDTLNYQVSEQTEALKKEVFHLNNVLKNLKGEHELGLEELKMLLTMEKEQCISQMLNIHE
AQTKSLQRDINNLTSGHQQALERESRLQEELNVLQTKLEDTLKVLEKQTEQHEKALRQQK
EMHEASIQKVEEDREQLLSAQRLEKETLTQKFTCEKEDSVQLSVKDFELHMQNVEKELSD
KVLLLQQQLGKSPSVDTHSLISELQETLQHGKQLFAEHLDLQERKKTEELQSLRISLIAE
QQTNFNTVLTREKVKKESIISELSEKLKSVTLQQDRDKALIETLSEDRAHLLQEKKKLEE
EFGKLQSLKSSTHMVFSSEPAGAYAPDPASEINRPVYDAAVVEEDRMEPTLDTSMTAVHD
TMLSEEKQKILLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLI
ILDERHDNYVLFTVSPTLYFLHSESLAALDLKQGEYASGSSRRPWVLGKVMEKEYCQAKK
AQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtgtttctggtgaatactggaatcaccctcacatttgacactgagctt
gctgtacaaacggtgactgaccttaagcatgccattcagactaagtacaagattgctgtt
cagcaccagatccttgtagtaaatggaggcgaatgtatggcaccagacaggagggtctgt
agttacagcgctggtactgacacaaatccaatattcctgttcaataaagagatgatattg
tgtgagcgtcctccggttattcccagaacaacattttcagcagagaatgaaatggagcta
aaggttgaagagtcgctcatgatgcctgcagtctttcacaccgtcgcctctaggacgcag
cttgcagtggaaatgttcgaggttgccaagaagctttgttcgttttgtgaaggtctggtt
cacgatgagcatcttcagcaccagggctgggctgccataatggccaacctagaagattgt
acacattcataccaaaaactgcttttcaagtttgagaatgcatattcaaaatacctgcag
tcaatagatgatattaaagttaaattaactaatctaggaactgccgtttccgtcatggcc
aagattccgctgctagagtgcctaacacgacacagctataggatgtgtctagataggttt
ttatcctctgcggaaggggatgtcgttgaacttgggaatgagaagactgctgaactagtg
caatgtgatgatgtaacaaaactaaaaaacatggctttgctagcttctctcactacatct
gtggaacatataacacaggaagtacatgacaatcgtattgagcaagacactatggattct
tctggccaggatatagacctttcggagggacatttgagtaacgaaggcccgccatttaat
gtatccctactggactggataaatgtgcaagatcgtccaaatgatgtggaatcgttggtc
aggaaatgttttgattctatgagcagactggatccccgaataattcagccattttcagga
gagtgccgtcaaacagttgccaaactggataatcaaaatatgaaagccattaaagggctg
gaagataggctttatgcactggatcagatgattgctagctgcagtagattggttaatgaa
caaaaagaacttgctcagggatttttagccaatcagaagcgggctgaaaatttgaaggac
ccctctgtgttaccagacttgtgtttgagccatgcaaaccaattaatgattatgttaaca
aaccacagaaaactgctggacatcaagcagaaatgtaccactgccaaacaggagcttgcc
aacaatctacaagtcagactaaagtggtgctgctttgtaatgctgcatgctgaccaagat
ggggaaaaaatccaggctttatttcgacttttaatggagcttcttgaaagggtgaaaata
gttgaggcattgagtacagttcctcaaatgtattgcttagcggtggttgaggttgtcagg
aggaaaatgttcataaaacactacagagagtgggcaaatgctttagtaaaggatggaaaa
tcactctatgaaaatgaaaaagcaaaaagggaaacatttgggaaattgtttaggaaatcc
tatttaagaaatcgtctttttcgaggacttgactcttggccttcatctttctgtactcga
aagcctaggaaatttgatagtgagcttcctgatatatctgtaaacgaccttcagtttttg
cagtcactttgtcctccagaagtgcaacttttcctcagggtacccttactttgtgatctt
gagcctctgcaccagcatgttcgtgctctccacaacctggtgaaagctgcgcagagtttg
gatgaaatgtctcagactattacagatctgttaaatgaacaaaaggtgtctaatggtcaa
gtttcaccacaatctgcaactacaccaaggattgaaagtgcaactgaagctacaactact
acctcatccaaatctccatcacttagtcttcagggtcccatttgtccttctgtctccatc
ccagcacccctagaagagttgtctccagatagtatcgactctcatacctttgattttgag
acaattcctcatccacatatcgagcagtcgcttaaacagggttccttggatttggactca
ttagcagatagtcctgaatctgactttatgtctgctgtcaatgaatttgttatagaggaa
aatcctgtgtcccctaacattagtgatacacaaagtccagaaatgatggtggagtcccta
tattcatcggtcataaatgcaattgacagcaggcgtatgcaggacacaaaaggtagtaaa
gataacagtgccgaaaacatatctttgaaagcttgtgtgaacagatgcaaagttgttgct
caagaatcgcaagccaatttacgaaattttagaaaagagctttgccaattaaagatactt
gtacaaagggagcagagtgaatttgccagtgctattaaatccgtttctgcggagatccta
aaaatgattcaacatgttaatgtttctcttgaaactacattgaaagagaaacattttgaa
gaattacagcttctacaaaaatcttatgaaaagcgactacagctgtcaaaggaagacctt
aatgtaaacgaagaagtcataaaacagttgaaaagtaatattacgggactaaaggaagat
ttgcaaactaaacaaatggaagttgctgctgtcagaagtgaaaatgaaacatttctgcac
ttacaaaatgaaagagatcagaaaatgatccatgtggaaagtgctatgagggaacaaact
tatgaaatgcagaagctcaaagagacccgggaaacaaccttagaggacttaaataaactt
tatacagagaatgaggaaaaactcagacttctcaaggaggagtttaaaattttagagcaa
acacacctcaaagaattagaagatcatttagagctcaggcatgcacaggaacttgaagat
gtaaaagtagaatataaatgctgcatagaaaaactgcagttagaaaataaacaaaaattg
gaccagttgcaggaatcttgtgcagccattgcaaaggataaagattctcagcttcaggaa
ctaaaccttagaatttcagaactttctgatattagatgtaaattagaagtggaattggcg
cttaaagaaggggaaattgatgaaataaaagttaatatggaagaaaataaagcacagcag
caagacaccttgaattatcaggtcagtgagcaaacagaagcactaaagaaggaggttttt
catctaaataatgtgttaaaaaatctgaaaggtgaacatgagcttggactggaagagctc
aaaatgttattgacaatggagaaagaacaatgtatttcacagatgctgaatattcatgaa
gcgcaaaccaaatcattacaaagagatatcaataatttgaccagtggccatcagcaagca
ctagaaagagaaagcaggcttcaggaagaactaaatgtcttacagactaaattagaagac
actttaaaagtacttgaaaagcaaactgagcagcatgaaaaggctttaagacaacagaaa
gaaatgcatgaagcatcaatacaaaaagttgaagaagatcgagagcagctgctatctgca
cagaggcttgaaaaggaaaccttgacacagaagtttacatgcgaaaaggaagattcagtg
cagctcagtgttaaggactttgagttgcatatgcagaatgttgaaaaagaactctctgac
aaagtactgcttcttcaacagcaattaggcaagagtccttctgtagacacacacagtttg
atctctgagcttcaggaaacgcttcagcatggaaaacagttatttgctgagcatcttgac
ttgcaggaaagaaaaaagactgaagagctgcagagtctcaggatatccttaattgcagag
cagcagacaaactttaacacagttttgacaagagagaaagtgaagaaagagagtataatt
agtgagctcagtgagaaactgaagagtgttacactacagcaagacagagataaagcttta
atcgaaactctctctgaagatcgagcacatttactgcaagagaagaagaagctagaagag
gaatttggcaagcttcagagtcttaagtcttcaactcatatggttttttcttcagaacct
gctggagcctatgcacctgaccctgctagtgaaataaatagacctgtttatgatgctgct
gttgtagaggaggatagaatggaacccactttagataccagcatgacagctgttcatgat
actatgttatctgaagaaaaacagaagatattgctgctagaaagaacactgcaattaaaa
gaagaagaaaataagcgactgaatcagaggctgatgtcacaaagcatgtcttcagtttcc
tcaagacattcagagaaaatagcaattcgagactttcaggttggagatttggtccttatt
atcttagatgaacgtcatgacaattacgtcctgtttacagtcagtccgacattgtatttc
ttgcattcagagtcattggctgcattagaccttaaacaaggtgagtatgcatcaggatca
tctagaagaccctgggttcttggaaaagttatggaaaaagaatattgccaagccaaaaag
gctcaaaaccggtttaaggtcccattggggacaaaattctatcgagtgaaagcagtgcca
tggaataagaaggtttaa
DBGET
integrated database retrieval system
