Rana temporaria (common frog): 120941027
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Entry
120941027 CDS
T07929
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120941027 (CHD7)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120941027 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
120941027
NCBI-ProteinID:
XP_040210191
LinkDB
All DBs
Position
5:327684191..327862085
Genome browser
AA seq
2978 aa
AA seq
DB search
MADPGMMSLFGEDGNLFSEGLEALGECGFPESSVNSLAQQMPMDQGFGSLQSPHHHNPSS
QNQAKLTHFDHYNQYEPQKMHIIDQPNRMMANTPGNGIASPHSQYHSTPVSQVPHGGSQM
GVYPGMQNDRHGAPFVDSGSMWGPRAVQVPDQIRPTYQQQQSQQQPQTPSAPQGPSHPQH
VQQMGNYMVRGDFSMQQHGPLQPQRMNQFSQGQDGLNQGNPYLGGAGPGHMSHVPQQNPN
MGPSLRHSVQQFHHHPPATLHGESVAHSPRFSPNPPQQGAVRPQSLNYNSRNQTVPSPTL
NNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNSTPMTPSVPRYPNAVGFPSNSQGLMHQQ
PIHPSGSLNQMNTQTMHPSQPQGYASPPPMSPLKAMSNPAGTPPPQVRPGSAGIPMDVGS
YPNMPHPPAHQPPGNMGMGQRTIGPRNMPQGQAFMGMSSTPREMGGHMRPNGCPGVSHAD
PQAIQERMMSGQQHPSHQSFQQQMANCQPHPAMHHQSSPSSHSHHQPWTSLHQSPQNTPQ
KVPVHQHSPSEPFLDNPVPDMTRLGGPNASLLNTEDFLPSLQSPPPQKKRKKKNNHITAD
NANFGQEGFLGENPDLSIEGAPGGKKKKKPKVKKEPKEPKEPKAKKEPKEPKAPKQPKTP
KEPKEKKVKTPKPKTSKKANKSDAEGSAQKKKVVKVKPEGAENEENAEKLITTPPPSSSS
PPPPAAPALASPVAPPAPEEEDDSGVQKRRSSRQVKRKRYTEDLEFKISDDEPDDLDGRD
SPSNLSQSELQDEGPVVEKIMSSRMTKKLLESGEEVEVEEFYAKYKNFSYLHCQWASLED
LEKDKRIQQKIKRFRAKQGQNKFLSEIEDDLFNPDYVEIDRILDVSTGADENGEPVTHYL
VKWCSLPYEDSTWELKQDLDPAKIEEFEKLQSREPATERVERPPADEWKKSESSREYKNN
NSLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIFLKSIHGPFLVIAPL
STIPNWEREFRTWTELNVIVYHGSQASRKTIQLYEMYFKDSQGKAIKGAYRFHAIITTFE
MILTDCPELRNIHWRCVIIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELF
SLLNFLEPERFPSESNFMLEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETI
IEVELTNIQKKYYRAILEKNFSFLSKGGGGGHANVPNLLNTMMELRKCCNHPYLINGAEE
KILEEFRELHSSDLPDFPLQAMIQGAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILE
DYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCII
FDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMS
GRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILSRRTHTITIESE
GKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDLDVLNGRNTLVIDTPRVRKQTR
HFSAVKEDDLMEFSDLESEAEDKPSIKPRRSQDKSHGYARSECFRVEKNLLVYGWGRWTE
ILSHGRFKRQLTEQDVETICRTILVYCLNHYRGDENIKSFIWDLITPTEDGQTRALVNHS
GLSAPVPRGRKGKKVKSQNSQPVFKHADWLPSCNPDTLFQEDSYKKHLKHHCNKVLLRVR
MLYYLRQEVIGDQADKIMEGADSSELDVWIPEPFHAEVPTDWWDNEADKSLLIGVFKHGY
EKYNSMRADSALCFLERVGMPDAKAMAAEQRGTDMLADGADGGDFDREDEDPEYKPARLA
FKDDMDEYANSPLEDKEECMEMDTQAAEKMVEGSTEMGKLYWPHTSALTTRLRRLITAYQ
RSYKRQQMRQEAQLKTDRRRRRPREEVRALEAEREAIITERRQKWTRREEADFYRVVSTF
GIVFDFTKQNFDWNQFRAFARLDKKSDDSLEKYFNCFVAMCRRVCRMTSKPDDDLCDLAT
VIEPITEERASRTLYRIELLRKIREQVLTHPQLNERLKLCQPSLDLPEWWECGKHDRDLL
VGASKHGVSRTDYHILNDPDLSFLEAHRNFAQNRGSTHPNMPILLPPGSSYSDTPPIMPS
SPVRDEKSGDQEEIKSEKVEEIDIKEEATVKNEPVEPEEKPVKQENDSETVSVKEEIKTS
ELTPDADPKSISEKGSEEDEEKLDEDDDKSEESSQAEAGLASQDKNFDEESNASLSTARD
ETRDGFFLEDCEPSGLHMLRERTFSFSFWPKDRLIINRLDHICETVLKGKWPVNRRQMFE
FPGLIPGCTPTAMDSPMQKRSFAELSMVAQGNFSGSEEITASPQLSQETAMSLTVPRQRR
RRRRKIEVEAERAAKRRNLMEMVAQLRGSQMGAENGQEKVVDLSNASREATSSTSNFSSL
NPKFILPNSSTPVSDAFKTQMERLQAGLSCTPTRHLLNGSLIDGEPPMKRRRGRRKNVEG
LDLLFMSNRRTSLSTEDTDVTKAYDDDIETPPARNIPSPGQLEPDTRIPVINLEDGTRLV
GEDAPKNKDLVEWLKLHPTYTVDMPSYVPKSADMLFSPFQKPKQKRHRCRNPNKLDINTL
TGDERVPVVNKRNGKKMGGAMAPPMRDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFD
RLLTGPVIREEGASRRGRRPKSEIAKAAAAAAAAASTSGINPLLMNSLFAGMDLASLQNL
QNLQSLQLAGLMGFPSGLATATGGDGKNPTAMLPLMLPGLPNMFGLSGLLNHQLAAGNGG
NTTTSSGQGETEDGTSKSDEKKMETDEDGKDSDKTTDSVSATDSVAATTAAGLAANSLAF
SPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPSLAGLQSTVSASEEKATDKGETENQEAS
DADETLDKTADSSVLEDDIAHEEELDSPEGGEEDEKDN
NT seq
8937 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccctggcatgatgagtctgtttggggaagatggaaatttattcagcgaaggc
ctggaggcccttggggaatgtggttttccagaaagctctgtcaattctttggcacaacaa
atgcctatggatcagggttttggttcattgcaatctcctcatcatcataaccccagcagt
caaaaccaagcaaagctgacccactttgatcactataaccaatacgagcctcagaaaatg
cacataatagaccagcctaacagaatgatggctaacactcctggtaatggtattgcctct
ccacattcacagtatcacagtacgcctgtttctcaggtgccccatggtggtagccaaatg
ggcgtctatcctggtatgcaaaatgacaggcatggagcgccatttgtggacagtggttct
atgtggggacctagggcagtgcaagtgcccgatcagataaggccaacataccagcagcaa
cagtcccagcagcaaccacagacaccttctgctcctcaaggtccctctcatcctcaacat
gttcagcaaatgggcaattacatggttcggggagatttttcaatgcagcaacatggtcca
ctacagccacaaagaatgaaccagttttcacaaggacaagatggtcttaaccaaggaaat
ccctatcttggtggtgcagggcctgggcacatgtctcatgtcccacaacaaaatccaaat
atggggccttcactgcgtcattcagtccagcaatttcatcatcatccccccgctactctg
catggagaatctgttgctcacagtcctagattttctcccaatcctcctcagcagggtgca
gttaggccgcagtcccttaattataactctagaaaccagactgtaccttcacctacgcta
aacaactcagggcagtattcccgttatccttatagtaaccttaatcagggattagttaat
aatacagggatgaatcagaacttaggccttacaaacagcactccaatgactccgtctgta
cctagatacccaaatgctgtggggtttccatcaaatagtcaaggactgatgcaccagcaa
cccattcatcctagcggctcacttaaccaaatgaacacacaaactatgcatccttcacag
cctcagggatatgcttctccacctcccatgtcgcccttgaaagcaatgagcaatccagca
ggcacccctcctccacaagttaggcctggcagtgcagggattcctatggatgttggaagt
tacccaaatatgccccatcctccagctcatcagccccctggcaacatgggcatgggacaa
agaaccattggtccccggaacatgccgcaaggccaggccttcatgggtatgtcttcaaca
ccaagggagatgggtgggcatatgagaccaaatggctgtccaggagttagccatgcagat
ccacaggcaatacaagaacggatgatgtctggccaacagcatcccagtcatcagtctttt
cagcagcaaatggcaaactgtcagcctcatccagctatgcaccatcagtcttcaccatct
tcacattctcatcatcaaccatggacttcgcttcaccagtcacctcagaatacccctcag
aaagtgcctgttcatcagcattccccatcggaaccttttcttgataatcctgtgccggat
atgactcgacttggtggtcccaatgcctctttattgaacacagaagattttttgccatca
ctgcagtctcctccaccacaaaagaagaggaagaaaaaaaacaaccacattactgcggat
aatgcaaactttggtcaggaaggttttcttggggaaaatccagatctttccattgaggga
gcgcctggtggaaagaagaagaaaaagcctaaggttaaaaaagagcccaaggagccaaaa
gagcctaaagcaaagaaagagcccaaggaacctaaggctccaaaacagcccaaaactccc
aaagagccaaaagagaaaaaggtgaaaactcccaaacccaagaccagcaaaaaggcaaat
aagtctgatgctgagggaagtgcacaaaagaagaaggttgtcaaagtaaagcccgaaggt
gctgaaaatgaagaaaatgcagagaaattgattactactccacccccttcttcatcatca
ccaccaccaccagcagcaccagcactagcatcaccagtagcaccaccagccccagaagag
gaggatgactctggagtacagaaaaggcgatccagccgacaggttaaaaggaaacgctac
acagaagatctggaatttaagatttcagacgacgagcctgacgatcttgatggaagagac
tcgccttccaatctgtcacaatccgaactgcaggatgaaggacctgttgtggagaagata
atgagcagccgtatgacaaagaaactgctggagtctggggaggaagtagaagtggaagaa
ttttatgcgaagtacaagaacttttcttatttgcactgccagtgggcctctctggaggat
ctggagaaagacaagaggattcaacaaaaaattaagcgttttcgggcaaagcagggccag
aacaagttcctctcagagattgaagatgatctatttaatcctgactatgtggaaattgat
cggatactagatgtctccaccggcgcagacgagaatggagagcccgtgacacactatttg
gtgaagtggtgctccctcccctacgaagacagtacatgggagctgaaacaggacttggat
ccagcaaagattgaagaatttgagaaactccagagcagagagccagcaacagagcgcgtg
gagcgacctcctgccgacgagtggaagaaatcggagagttccagggagtataaaaacaat
aacagtctcagggaataccagttggaaggagtgaattggctgctgttcaattggtacaac
acgcgaaattgcatcttggctgatgaaatgggtttggggaaaacaatccagtcaattacc
ttcctatatgagatcttcttgaagagcattcacggtccattcttggtcattgcgccactg
tcaacgatccctaactgggagagagaattccgcacatggacagaactgaatgttatagtt
tatcacgggagccaagcaagcaggaaaaccatacaactctatgaaatgtactttaaagat
tcacagggcaaagcaataaagggtgcctaccggttccatgccatcattacaacatttgaa
atgattctgacagactgccctgagctcagaaacatccactggcgatgtgtgattattgat
gaggctcaccggctaaaaaacagaaactgtaagctcttggaaggactaaagatgatggat
ttggaacataaagtgctgctaacagggacccctttgcaaaacactgtggaggagcttttc
agcctgctgaacttccttgaacctgaacgcttcccatcagagagcaatttcatgctagaa
tttggcgatctaaaaacggaagaacaggtacaaaagcttcaagctatactgaaaccgatg
atgttaagacgtcttaaggaagatgttgagaagaatttggccccaaaggaagaaaccatt
atagaagtagagctgacaaacatccagaagaaatattacagagccatcttggagaagaat
ttttctttcctttccaagggaggtggtggtggccatgcaaatgttcctaaccttctaaac
actatgatggagctgagaaaatgctgcaatcatccttaccttattaatggtgctgaagag
aaaattttggaagaatttagggaactgcacagcagtgaccttccagattttccgctccag
gctatgatccagggcgctggcaaactagttcttattgacaagctgctgccaaaactgaag
gctggtggccacagggtgctcatcttctcccagatggtgcggtgcttggacattctggaa
gactacctcatccaacgcagatacccatatgagagaattgatggcagagtgagaggcaac
cttcgccaggctgctattgacagattttccaagccagattctgataggtttgtgttcctg
ctgtgtacaagggcaggaggtctgggcattaatttaactgctgctgatacttgcattatc
tttgattccgactggaacccccagaatgaccttcaggcgcaagctcggtgccatcggatt
ggacagagtaaatctgtgaaaatttatcgcctgatcacaagaaattcctatgagcgtgaa
atgtttgataaggctagcctgaaacttggcttggataaggcagttctgcagtccatgagt
ggaagagagaatgctactaatggggtacagcaactgtccaagaaggaaatagaagacctt
ctacggaaaggggcatatggggcactaatggatgaggaagatgaaggctcaaagttctgt
gaggaagatatcgatcaaatcctttccaggagaacccacaccatcactatagaatcagaa
ggaaaaggctccacctttgcaaaagccagttttgttgcctctgggaatcggacagatatt
tctttggatgaccctaatttctggcagaagtgggctaagaaagcagagctcgatcttgat
gtattgaatggaaggaacacactggtaattgacacaccacgggtaaggaagcagacaaga
catttcagtgcagtaaaggaagatgatcttatggagttctccgacctggagagtgaagcc
gaggacaaacctagcattaaaccacgtcggtctcaggacaagtcccatggctatgcgaga
agtgaatgtttcagagttgaaaaaaacctgctggtctatgggtggggccgatggacagag
atcctttcccacgggcgcttcaagcgtcaacttacagaacaagacgtggaaaccatctgc
cgtaccattttggtgtactgtctcaaccattacagaggggacgagaacatcaaaagcttt
atctgggatctaatcacaccaacagaagatggccagactcgggctctggtaaaccactca
ggcctatctgctccggtacccaggggtaggaaaggaaagaaggtgaaaagccagaattcg
cagcctgtgttcaagcatgcagattggctccccagctgcaatcccgacaccttgtttcag
gaggatagctacaaaaagcatcttaagcatcactgtaacaaggtcctgctgcgtgtccgc
atgctctactatctcaggcaagaagtgataggggaccaagctgacaaaatcatggagggt
gctgactcaagtgaattagatgtttggataccagagcccttccatgcagaagttcctaca
gattggtgggataatgaagctgataaatcccttttaattggcgtctttaaacatggttat
gagaagtataattccatgcgggctgattcggcgttgtgtttcctggagagagtcggcatg
cctgatgcaaaagctatggctgcagagcagagagggacagatatgctggcagatggtgct
gatgggggagactttgatcgcgaggatgaagatccagaatacaaaccagcaaggcttgca
tttaaagatgatatggatgaatatgcaaactcccctctcgaggacaaagaagaatgcatg
gaaatggacacgcaagctgcagagaagatggttgaaggcagcacagagatgggaaaactg
tactggcctcatacttcagcccttactacccgcctgcggcgtctaatcactgcctaccaa
cgcagctataagcgccagcaaatgaggcaagaggcccagctgaaaacggaccgaagaaga
cggcgtcctcgggaagaagtaagggctttggaagcagaaagggaagcaattataacagaa
agacggcaaaaatggacaagaagggaggaggctgacttctatcgtgtagtgtcaacattt
ggaatagtttttgactttacaaaacagaattttgactggaaccagttcagagctttcgcc
cgtctggataaaaaatctgatgatagtctggagaagtatttcaactgctttgtggctatg
tgccgaagagtttgtagaatgaccagcaagcctgatgatgatctttgcgatctcgctaca
gtaattgagcccataacggaggaacgtgcttctagaactctttatcgcattgaacttttg
cgaaaaattcgggagcaagtacttactcacccccaactaaatgagaggcttaaactgtgc
cagccaagccttgaccttccagaatggtgggagtgtggaaaacatgatagagacttgttg
gttggtgcctcgaaacatggagttagtaggacagattatcatattcttaatgatcccgat
ttgtcttttctggaagctcataggaattttgctcaaaaccgagggagcacgcatcctaat
atgcccatccttctaccgcctggatccagttatagtgacacaccccctataatgccctct
tctcctgtgcgggatgaaaaatctggagaccaggaggaaattaaatctgaaaaagttgaa
gagatagacataaaggaagaagcaacggttaaaaatgaacctgtagagccggaggagaaa
cctgtaaaacaggaaaatgactctgaaacggtttctgttaaggaggaaattaaaacctca
gagcttactccagatgccgatccaaaatccatttctgagaagggatcggaagaagatgaa
gaaaaattagatgaggatgatgataaatctgaagaatcttcccaggcagaagctgggcta
gcttctcaggacaaaaactttgacgaggaaagcaatgcctcgttgagtacagcgcgggat
gaaacacgagatggctttttcctagaggactgtgagccgtccgggcttcatatgctacga
gagaggaccttctcattctccttctggcctaaggatcgtctgattatcaaccgattagac
cacatctgtgagaccgtgctgaaaggaaagtggccagtaaacagacgccagatgtttgag
ttccccgggctcatccctggatgcacaccaactgccatggacagcccgatgcagaagaga
agctttgctgaactctccatggtggcccagggcaacttcagtggaagtgaagagatcact
gcttccccacaactgtctcaggaaaccgctatgagtttgacagtacctcgtcagcgaagg
cggaggaggaggaagatagaggttgaagcagaaagagctgcaaagaggaggaatctaatg
gaaatggtggctcagttacgtggatctcagatgggagcagaaaatggacaagagaaagtt
gtggatttatcaaatgcctccagggaggctacaagttctacctcaaatttttcatctctt
aatcctaaatttatcttgcctaattcatccacccctgtctctgatgcctttaaaacccaa
atggagcgactgcaggcaggtctttcttgcacgccgactaggcatctcctcaatggttct
ctaatagatggagagcctccaatgaagaggagaagaggaagaaggaaaaacgtagaaggt
cttgatctattgttcatgagcaacagacggacttccttatctacggaagataccgatgtg
accaaagcatacgatgatgatattgaaacgccaccagcaagaaacattccatctcccggg
cagctggagccagacacccggatccccgtcattaacctggaggatgggaccagactagtt
ggggaggatgctccaaaaaataaggacttggttgaatggttgaaactgcatcctacttac
actgtcgatatgccaagttatgtaccaaagagcgcggatatgttgttctccccatttcaa
aaacctaaacagaagcgtcacagatgccggaatcctaacaagctggatattaacacatta
acgggagatgaaagagtgcctgtagtgaataagcgcaatggaaaaaagatgggtggagcg
atggctcctccaatgagggatcttcctcgttggcttgaagaaaaccctgaatttgctgtt
gctccagactggacggacatagttaagcagtctggttttgtaccggaatccatgtttgat
cgtcttctcactggacctgttataagggaggagggagccagccgaagagggagaaggcca
aaaagtgaaattgccaaagcagctgctgctgccgctgctgcagcctcgacgtctggaatc
aatccactgctgatgaatagcctctttgctggaatggatcttgctagtcttcagaatctt
cagaacctgcagtctctccagcttgccggtcttatggggttcccttcaggccttgcaaca
gccactggaggggatggtaaaaatcctactgccatgctgcctctgatgctgccaggtcta
cctaacatgtttgggcttagcgggctcttaaatcaccaattagcagctggcaatggtggg
aatactactacatcttcaggtcaaggagaaaccgaagatggcacttcaaagtctgatgag
aaaaaaatggaaactgacgaggatggcaaagactctgacaaaactacagactctgtttct
gctactgactctgttgctgctactactgcagcaggattggctgcaaattctctggccttc
agccctttcctactgtctaccatggctccaggccttttctacccctccatgtttctacct
ccagggctaggaggactgacgttgcctggttttccatcactagctggacttcagagtact
gtaagcgctagtgaggaaaaggccactgacaaaggggaaacagagaaccaggaagccagc
gatgcagatgagaccctggacaaaacagcagactcatccgttttggaagatgacatagca
cacgaagaagaattggactcacccgaaggcggggaggaggacgaaaaagacaattaa
DBGET
integrated database retrieval system
