Rana temporaria (common frog): 120941077
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Entry
120941077 CDS
T07929
Symbol
TRIM55
Name
(RefSeq) tripartite motif-containing protein 55 isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120941077 (TRIM55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120941077 (TRIM55)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120941077 (TRIM55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Cbl_N
Sina_RING
RNase_E_G
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
120941077
NCBI-ProteinID:
XP_040210265
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Position
5:332720926..332923481
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AA seq
537 aa
AA seq
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MSTSLAYQSLSKEQQTMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCASDIFQASNP
YLPTRGGNTVATGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTKSTRPER
KSNQPICEEHEDEKINIYCLNCEVPTCSMCKVFGAHKNCEVAPLAQVFQGQKSELSEGIA
VLVGCNDRIQAVISQLEETCKTVEENCKRQKEQLCEKFDYLYAILEERKGELTQVITRDQ
EEKFEYVKSLMKKYADHTETVSKLVESGIQFLDEPEMAVFLQNSKALLQKITEASRGFQM
EKIEPGYETMNHFTVDLNREERILREIDFYREDEEEEEDAGEAEDFEEVHTESSGEEETA
EQVTQSPQPTPESTVTSTSTSQEQTSPQETDQQNPSPPAPQGSVEPSGIQQTPNAQVLSA
TETSNRLLYPSWYKNQTWQQSSSNKAPVTEAVGPVISPIPKEMTVKKVDPPATTFKESIA
VTGKDTSSSANMPQTGSETAAAAALGDAQGTPEANQSENTDSSHHVFSFSWLNSLPK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctcgctggcttaccagtccttgagtaaagagcaacaaactatggataacttg
gagaagcaacttatatgtccaatatgtctggaaatgttttccaagccagtggtaatcctt
ccttgccaacataatctgtgtaggaaatgtgccagcgacattttccaggcttccaaccca
tatttaccaaccagaggaggaaacactgtggccacaggaggtcgcttccgttgcccatcc
tgcagacatgaagtggttctggaccgacatggagtgtatggcttgcaaagaaacttgctg
gttgaaaatatcattgatatttacaagcaggaatcaactaaatctacaagacctgaaaga
aagtccaatcaaccaatctgtgaagagcatgaagatgaaaaaattaacatatactgtctg
aactgtgaagtgcccacatgctccatgtgtaaagtatttggagctcataaaaactgtgag
gttgcgccacttgctcaggtgtttcagggccaaaagtctgaactgtcggagggcattgcg
gtcctggttggatgtaacgaccgaattcaagcagtgatttcacaactagaggaaacttgt
aaaactgtggaggaaaactgcaagagacaaaaagaacagctgtgtgagaagtttgattat
ttatatgctatacttgaagaaagaaaaggtgaactaacccaagtaatcacaagagaccaa
gaagaaaaatttgaatatgtcaagtctttaatgaagaaatatgcagatcatacagaaaca
gtttcaaaattggtggaatcaggaattcagttcttggatgagccagaaatggcagtgttc
cttcaaaattccaaggctttgctacaaaaaataacagaagcatccagaggatttcaaatg
gaaaaaattgaaccaggatatgaaaccatgaatcactttacagtggacctaaacagagaa
gagagaatactacgtgagatagatttttatagagaagatgaagaggaggaagaggatgca
ggagaagctgaagattttgaagaagttcacacagaatcttctggtgaagaggaaacggca
gagcaagtgactcagagccctcagcccacaccggaatccaccgtcacgtccacaagtacc
agccaagaacagacctcccctcaggagacagatcagcagaatccaagtccccctgcccca
caaggtagtgttgagccaagtggtattcaacagacgcctaatgctcaagtgctctcagca
acagaaacttcaaaccgcttgttataccctagctggtataagaaccaaacatggcaacaa
tccagctctaacaaggccccagtgactgaggctgtgggtccagtaatttctcccattcca
aaggaaatgaccgtaaagaaagtagatccaccagcaacaacttttaaggagagcatagca
gtgactggtaaggacaccagttcatctgcaaatatgccacagactggatctgagacagca
gcagcagcagccctgggagacgcacaggggactccagaagcgaatcagtctgaaaacaca
gactcttcacatcacgtcttctccttctcctggctcaattcattaccaaaataa
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