Rana temporaria (common frog): 120941149
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Entry
120941149 CDS
T07929
Symbol
STAU2
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtem01009
]
120941149 (STAU2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120941149 (STAU2)
Protein phosphatases and associated proteins [BR:
rtem01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120941149 (STAU2)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120941149 (STAU2)
mRNA cycle factors
Stress granule specific factors
120941149 (STAU2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
120941149
NCBI-ProteinID:
XP_040210360
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All DBs
Position
5:complement(339454509..339844818)
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AA seq
714 aa
AA seq
DB search
MAHIKAPSSASMCDSSFSSVLPTPATSASQMSVQSSLNGSTTETATGSPPESSVDSSSSS
SSSSSSVSSPGVAAEDGKAKFLEVPLHENMTNPKEKTPMCLVNELARFNRIQPQYKLLDE
RGPAHSKLFTVQLTLGDQSWEAESTSIKKAQHAAASLALSETKLPKPAARQMKNIINNNP
EAAARRGNVYSSTRLSAKGSITPTVELNGLAMKRGEPAIYRPLDPKPLPNHRTNYNYRGM
YNQRYLCPMLKTFYVQLAVGNSEFYGEGKTRQAARHNAALKALHALRNEPIPERSTVQNG
ETGRGPEEDKDANKSEISLVFEISLKRNLPLSFEVTKESGPPHMKSFITKVTVGEFTAEG
EGNSKKLAKRRAAAAVLQELRKLPPLPVVEKPRLYVKRRPKTIIKASPEYGQGMNPISRL
AQIQQAKKEKEPEYVLLSERGIQRRREFIMQVKVGEQTATGAGPNKKTAKRNAAEAMLLQ
LGYKASTPVAESSAKHGEVQGWGDGGSGTSDQTSTPKGILHLSPDVYQEMEASRSKTVPA
PAVNYLSSKELSQPSSSYFSTPVGQSCTSAIARELLTNGSSPTAEAIGFAGNNKTCTTSS
VQPSKQLDYLAGIQGMQVSYNDRQSGNDFMTCLTLSPVQMTFHGIGNSVETSHDQAALSA
LKQFSEQGLDSVDGSLMSENGLFEQAKHRGEKSDTTQANSGTTAQDCKDPKAIV
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcacacatcaaggcaccatcatctgcatccatgtgtgactcttctttttcttctgtg
ctacccactcctgccaccagtgccagtcagatgagtgtgcaaagctccttaaatgggtca
actacagaaacggccacaggcagcccccctgagagttcggtagattcttcttcttcttct
tcttcttcctcctcctctgtgagctcaccaggtgtggctgctgaagatgggaaagccaaa
ttcttggaagtgcctctccatgaaaacatgacaaaccccaaagagaaaacgccaatgtgt
ttggtgaatgagttagcccgctttaataggattcagccacaatacaaacttctggatgaa
agaggaccagcgcattccaagttatttactgtacagctgacactaggagatcagtcatgg
gaagcagagagcacaagcattaagaaagcgcaacatgctgcagccagtctagcattgtcg
gaaaccaaactccccaaacctgcagcgaggcagatgaaaaatattatcaataacaaccca
gaagctgctgcacggcgtgggaatgtatattcatcaacaagactctctgctaaaggcagc
ataactccaaccgttgagctgaatggtctggccatgaagagaggcgagcctgccatttat
cggcctttagatcctaaaccacttccaaaccatcgtaccaactacaattatcggggcatg
tacaatcagagatacctttgcccaatgctaaagacattttatgtacaattggcagtcggc
aacagtgaattctatggagagggaaaaacccgccaggcagcaagacacaatgcagcatta
aaagccctgcatgcactgaggaatgagcccatacctgagagatcaaccgtgcaaaatggg
gaaacaggaagaggacctgaagaagataaggatgcaaacaaatcggagatcagtctggtg
tttgaaatttccctaaagcgcaatctcccactcagctttgaggtgaccaaggaaagcggc
cctccacacatgaagagttttattaccaaagtgacagtgggagaattcactgctgaagga
gaagggaacagcaagaagcttgcaaagcggagggctgctgcagcagtactgcaggaatta
cgaaaactccctcctcttcctgtagttgaaaaaccaagactttacgtcaagagacgcccc
aaaactataataaaggcttccccagaatatggccaggggatgaatccaatcagtcgcttg
gctcagattcaacaggctaagaaagagaaggaacccgagtatgtcttgctgtcagagaga
ggaattcagcgcagaagagaattcattatgcaggtcaaagttggagaacaaactgccact
ggagctgggcccaataagaagacagcaaagcgaaatgctgcagaagccatgctgttgcag
cttggctataaagcttcaaccccagttgcagagagcagtgcaaagcacggagaagttcaa
ggctggggagatggagggtctgggacatctgaccaaactagcactcccaagggaatactg
catctctctcccgatgtctatcaagaaatggaagccagtcgcagtaaaacagtgcctgct
cctgctgtcaactatctgtcatccaaagagttgagccaaccatccagctcatattttagc
actccagtaggccaaagttgcacttctgcaattgccagggagctcctaaccaatggaagc
tcccctactgcagaggctattggatttgcagggaacaacaagacttgcaccacatcctct
gtgcagccttctaaacagctggactatctggcgggcattcagggcatgcaggtcagttac
aatgatagacagagcgggaatgatttcatgacatgcttgacactgtcgcctgtgcagatg
acattccatggcattggcaactctgtggaaaccagccacgatcaggcagctttaagtgcc
ttgaaacaattttcagaacaaggacttgattctgtggatggatctctcatgtcagaaaat
ggattatttgaacaagccaagcatcgtggagagaagtcagacactacgcaggctaactca
ggcaccactgctcaggactgcaaggatccaaaggccatcgtctag
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