Rana temporaria (common frog): 120941280
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Entry
120941280 CDS
T07929
Symbol
NBN
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03440
Homologous recombination
rtem04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120941280 (NBN)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
120941280 (NBN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtem03032
]
120941280 (NBN)
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120941280 (NBN)
DNA replication proteins [BR:
rtem03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
120941280 (NBN)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
120941280 (NBN)
BRCA1-C complex
120941280 (NBN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
BRCT
RTT107_BRCT_5
PTCB-BRCT
Yop-YscD_cpl
MU2_FHA
Motif
Other DBs
NCBI-GeneID:
120941280
NCBI-ProteinID:
XP_040210535
LinkDB
All DBs
Position
5:complement(354308697..354436955)
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AA seq
761 aa
AA seq
DB search
MWKLERESEGGGQLYNFLSDTDYVVGRKNCLILIEDDQSISRAHATFSVSHPLSSLGRPD
IIPVLYVKDSSKYGTFVNGEKMASATSRNLKSGDKITFGVYNSKFRVVYEPLVACSSCLS
STEKSSLNQALQILGGHVVNNWTENCTHLVMASIKVTIKTICALICCKSIVKPEYFSEVI
KAIKEKQSLPEPTSFVPIIDEPSLQTDSLDVSENRKRKTIFKDNIFLFLTAKQHKKLSPA
VHFGGGKAQLLVGECDDKHLLGNPKTLVIDVGATESQLSESQTPTWVTSIMTILQGKGLR
AIPEAEIGLAVIYMSTEIYCNPQQRAGNRNETEKATRSNIIGSSFSSSMAVNETIMPVST
FNTTAYVADTEPQDQTHNWVDISGAQEVKETPKSSRHDSTKSDMSADRDRESSSSGDSRS
ALFQEQSKPTEKKSQTIISVEKPASQKAKTSQKMVSSKMLDFFKPTAKKRDRGVDEGELS
TAKMARVENSVSQGSNPGKNVSSVKQKDLDILSSNDMDLDTEPNVVSKEKTDLSDRWPKC
NDASMSGTVKDASTKRKQPDDDDDVVEESDVENDEISDQVKEKTHKTNPVMIKRQRLDSG
EELKAELSGNSIRTTHSEQKVKTEPLVKQEPVSPSEDKKTMMMMMVHPKKENDDNIPNRL
LLTEFRTLVVSRPAGCSQYTTIAKQRNGPNFKKFRKAAYPGAGSFPHIIGGSDLIAHDKK
KNSELEQWLRQEMEEQTQQAREQSLAEDLFRYNPKNVKKRR
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagttggagagggagagtgaaggaggaggacagctgtataactttctcagcgat
actgattacgtagtgggacgtaagaactgtttaatattgattgaagatgatcaatccatc
agcagagctcatgcaaccttctctgtcagccaccccctctccagtctgggccgtccagac
atcatacctgtcctgtatgttaaagattcctcaaagtatggtacctttgttaatggtgaa
aagatggcaagtgctacatctaggaatttaaagtccggcgataagattacatttggggtg
tacaatagcaaattcagagtggtatatgaacctttagtggcttgttcatcctgtttaagc
agcacagagaagagttctttaaaccaagcactgcagatacttggtggccatgttgtgaac
aactggacagagaactgtacacatctggtgatggcctcaattaaagtaactatcaagaca
atatgtgcactaatttgctgcaagtccatcgtgaaacccgagtactttagtgaagttatc
aaagccatcaaagagaagcaatcactacctgaacctacaagctttgttcctataattgat
gagccatccttacagactgactcgttggatgtctcagaaaatagaaaaagaaaaactatc
ttcaaagacaacatttttctattcttgactgccaagcagcacaagaaactgagcccagca
gtgcactttggaggtggcaaagctcagctgttagtgggcgaatgtgacgacaagcacctg
ctaggaaaccccaagactttggtgatcgatgtgggagcaacagaatctcagctctctgaa
tctcagaccccaacctgggtcacatctatcatgactattcttcaaggtaaaggattgcga
gctattccagaagctgaaattggtttagccgttatctacatgtcaacagaaatatattgc
aatcctcagcaacgtgcagggaatagaaatgagacggaaaaggccactaggagtaacatc
attggatcttcattttcctccagcatggctgtcaatgaaactataatgcctgtatccacc
ttcaacaccacagcttatgttgcagatacagagccacaagaccagactcataattgggtg
gatataagcggagctcaagaagttaaagagacacccaagagcagtagacacgacagcact
aaatctgatatgagtgcggaccgtgatcgggaatcaagttctagtggggacagcagatct
gcattgtttcaggagcaatcaaaaccaacagagaaaaagagccagacaattatatctgta
gaaaaacctgcctcacaaaaggcgaaaacctcgcagaaaatggtgtcatccaagatgctg
gatttttttaagcctactgccaagaaaagggatagaggtgtggatgaaggagaactgtct
actgccaagatggcaagagtggaaaacagcgtttcccagggttcaaatcctggtaaaaac
gtctcttcagtaaaacagaaagacttggatattctatcttctaatgatatggatttagat
acagagcccaatgttgtatctaaagagaaaacagacttgtcagatcggtggcctaaatgt
aatgatgcctccatgtctggtacagtgaaagatgcatcaacgaagaggaagcaaccagat
gatgatgatgatgtggtggaagaatctgatgtggaaaatgatgaaattagtgatcaagtt
aaagagaaaacccacaaaacgaatccagtcatgatcaaaaggcaacgcttggattcagga
gaagaactcaaagcagagttgtctggaaacagtatcagaactacgcatagtgaacagaaa
gtaaaaacagaacctttggtgaaacaggagccagtgtccccaagtgaggacaaaaagact
atgatgatgatgatggtgcacccaaagaaagaaaatgatgacaacattccaaacagactt
ttgctgacagagtttcgaacacttgttgtcagtcgaccagcaggatgcagtcagtatacc
accattgccaagcaaagaaatggacctaattttaaaaaattcagaaaggctgcttatcca
ggagctggaagctttcctcatatcataggaggttctgacttgatagctcatgacaagaag
aagaattccgaactggaacaatggttacgtcaagagatggaggagcagactcagcaagct
agagaacaatccctggctgaggatctgttcagatataatccaaagaacgtgaaaaagcga
agataa
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