Rana temporaria (common frog): 120941336
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Entry
120941336 CDS
T07929
Symbol
CDH17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtem04515
]
120941336 (CDH17)
Cell adhesion molecules [BR:
rtem04515
]
Cadherins
Major cadherins
120941336 (CDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
RET_CLD1
Cadherin_4
RibLong
Motif
Other DBs
NCBI-GeneID:
120941336
NCBI-ProteinID:
XP_040210605
LinkDB
All DBs
Position
5:complement(358406406..358513461)
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AA seq
827 aa
AA seq
DB search
MKFKYLFIFLCFILAQIIVEAQLEQGPLGEKIFNVQEGTKTTIYQFQKSDARSHMFVLEG
TTDGLIEIQHDNGILQTTGPLDWTTKPLYSLQVKTVDTSGSVIEGPYLLTIIVDDINNHR
PTFNQSEYFATVRELSRPGIPFLTVYATDEDDPSTPNAQLVYKIEQQIPDPIKVRFFQIN
NITGKISTTLNGTYHLKAEDATEYELRLSVSDTAELSFSSNAKVYITVIENLWKEPIPVT
IEENSVLPHPRFITQVRWNDDSVIYELHQRERYLRFPFVIDQNGNINVTEPLDREEREQY
VFFALAKNIVGASVARPLQIVVNVADVNDNPPVCPSEITTFEVQENEGAASTIGLFIATD
NDEPNTRNSSIIYKLLEQIPSDNRFLINEFSGSIQLITGGLNIKDNDQYRLKVNVSDEGR
PALSTICWIVINVIDINDHIPIFERSNYGSITMREDVPLSTLVMEIQAWDADQPQTGSSA
IIYQIIQGDPNHMFKIETNPETNRGNITVAKPLDYESFQVHDLVIEAKNPEPLVTGVHYN
ESSVTRLHVVILNVDEKPVFSNAIYQAQQKENIPIGTKLITVSASDPEGDEIKFSLVENP
RNWLRIDEKTGDIYTNYELDREQESHYQVKVIATERNNPEMSSWVYFTLFIDDVNDNPPR
LAKDYWGDFTVCYPFSTLATFDFQGKDDDHPPGGLTLKFRIDDQNFAKDWQIYSINRTAA
RLTMKHVNFPKESVSVPVKLTDNGKPPIEATVHVPVRICTCATKNQCEKTPVENTQATSV
GMALGILFGVLGFIAIIISAVFISMNMKKKKQAGQDGTAAERETMST
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaaatacctttttattttcctatgttttatactggcacagataattgtggaa
gctcaattagagcagggacctctaggagaaaagatattcaatgttcaagaaggaactaaa
acaactatctatcagtttcagaaaagcgatgccagatcacacatgtttgttctggaagga
acaacagacggtttaattgaaattcaacatgataatgggattctgcagacaactggacca
cttgactggacaacaaaacctttgtacagtttgcaggttaaaactgtagacactagtgga
tcagtaattgaaggtccatatcttcttactattattgttgatgacatcaataatcataga
ccaacttttaaccagtctgaatattttgccacggtacgggaactgtccagaccaggcata
ccatttctcactgtttatgccactgatgaggatgatccatcgacacccaatgcccaacta
gtctataaaatcgagcagcagatcccagacccaatcaaagtacggttcttccaaatcaac
aacattactggaaaaatatccacaacactaaacggaacttaccatttaaaggcagaagac
gcgactgaatacgaacttcgtttaagtgtttctgacacggctgaactatccttcagctcc
aatgcaaaggtctatattacagtgatagagaacctatggaaagagcccatacctgtcact
attgaggaaaattctgtgttgccccatcctcgttttataacacaggtgcgatggaatgat
gacagtgtcatatatgaattacaccagagagagagatatctaaggttcccttttgtcatc
gatcagaatggaaatattaatgtaacagagcctctggacagagaggagcgcgaacagtac
gtattttttgccttggcaaaaaacattgtaggagctagtgtggctagacccctgcaaatt
gtggtaaatgttgctgacgtcaatgacaacccgccagtgtgtccatcagaaattactaca
tttgaagtacaggaaaatgaaggcgctgcgagcactattggtttgtttatagccactgac
aatgatgagccaaatacaagaaactcatctatcatctacaaactactggaacaaatacct
tcagataacaggtttttaatcaacgaattcagtggttcaatccagctaattactggcggg
ctaaatattaaagacaacgaccagtacaggttaaaagtgaatgtttctgatgaagggagg
cctgctcttagtacaatttgttggatagtgattaatgtaattgacatcaacgaccacatt
cccatttttgaaaggtctaattatggaagcataaccatgagagaggacgttcctttgtca
actttggtgatggaaatacaggcctgggatgctgaccaaccacaaactggaagctctgcc
attatttaccagatcattcagggagacccaaatcatatgtttaagattgagacaaatcct
gaaacaaatcgaggaaacatcacagtagctaagccactggattatgaatcatttcaagtg
catgacctggtgatagaagccaagaaccctgagcctctggtcacaggagtacattataat
gaaagctccgtcacacgtttacacgtagtcatcctcaatgtggatgagaagccagttttt
tcaaatgcaatataccaagcacaacaaaaggagaatattcccataggaacaaagttaatt
actgtgtcagcctcagatcctgaaggagatgaaattaagttttcgctggtagaaaacccc
aggaattggctcagaatagatgaaaaaactggagatatctataccaattatgaactggat
cgtgaacaagaaagccactaccaggtgaaagtgatcgctacagaaagaaataaccccgaa
atgagctcctgggtgtacttcaccctcttcattgacgatgtcaatgacaatcctccccgc
ctggccaaggactattggggtgatttcactgtctgctatccattttccacacttgcgaca
tttgattttcagggaaaagacgatgaccatccacctggtggcttgacgcttaaatttcga
attgatgatcaaaattttgcaaaggactggcaaatttattccattaaccgcactgctgca
cgcctgaccatgaagcatgtaaatttcccaaaagaaagtgtctctgtaccggtaaaactc
acagataatgggaaacctccgatagaagcaaccgtccacgtcccagttcggatatgcact
tgcgccacaaaaaatcagtgtgaaaagacacctgtagaaaatacgcaggcaacatcggtt
ggaatggcccttggtatcttatttggagtcttgggttttatagctattattatttctgct
gttttcatctcaatgaatatgaagaagaagaagcaagctgggcaggacggcactgctgca
gaacgagagacaatgagtacctaa
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