Rana temporaria (common frog): 120941444
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Entry
120941444 CDS
T07929
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtem03009
]
120941444 (DCAF13)
04121 Ubiquitin system [BR:
rtem04121
]
120941444 (DCAF13)
Ribosome biogenesis [BR:
rtem03009
]
Eukaryotic type
90S particles
Other 90S particles
120941444 (DCAF13)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120941444 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
eIF2A
ANAPC4_WD40
Beta-prop_NUP159_NUP214
NBCH_WD40
KNTC1_N
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
WAC_Acf1_DNA_bd
Motif
Other DBs
NCBI-GeneID:
120941444
NCBI-ProteinID:
XP_040210757
LinkDB
All DBs
Position
5:370393027..370429961
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AA seq
445 aa
AA seq
DB search
MKVKVLCRNPDDYVRETKKDLQRVPRNYDPSLHPFEVPREYTRALNATKLERVFAKPFIA
SLDGHKDGINCMAKHPKSLSTVFSGACDGEVKIWNLVSRKCTRTIQAHEGFVRGLCVRFC
GTSFFTVGDDKTVKQWKMESPGYGEKEEPIHTILGKTVFTGVDHHWRDPVFVTCGQQVDV
WDEQRTSPMRSYAWGVDSISSVRFNPIETHILGSCAVDRSIVLYDMRKPTPLKKIILEMR
TNAICWNPMEAFIFTAANENYKLYTYDMRYMDSPVKVHLDHVSAVLDVDYSPTGKEFVSA
SFDKSIRMFSVESGHSREVYHTKRMQHVTCVRWSADNKYILCGSDEMNIRIWKANASEKL
GLLTPREKAAQNYNQKLKEKFQHHPQIKRISRHRHLPKSIYSQIKEQRVMKEARRKKDVN
RRKHSKAGTVPILSEKQKPVVAVVD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaggtgctgtgcaggaatccggacgactatgtgcgggagaccaagaaggat
ctacagagagttcctcggaactatgatccttccctgcacccgtttgaagttccccgggag
tacaccagagccctcaacgccaccaagcttgagcgtgtctttgccaagccgttcattgct
tcattagatggtcacaaagatggcatcaactgtatggcgaaacatcccaagagcttgtca
actgtgttctccggagcctgcgatggagaggtgaagatttggaatttagtctctcggaag
tgtaccaggaccatacaggcacatgaaggattcgtccgagggctctgtgttcgcttttgt
ggaacatcattttttacagtaggtgatgacaagacagtaaaacagtggaagatggaaagt
ccaggatatggagagaaggaggaacctatacatacaatactgggaaagactgtctttaca
ggggtggaccatcattggagggaccctgtgtttgtcacatgtgggcagcaggtggacgtc
tgggatgagcaaaggacgagtccaatgagatcttacgcctggggagtggacagcatttca
agcgtccgatttaaccccattgagacacacattttgggaagctgcgcagttgacagaagt
attgtcctttatgatatgcggaagcctacaccactgaaaaagattattctagagatgaga
acaaatgcaatctgctggaaccccatggaagcttttatttttacagctgctaatgaaaac
tacaaactgtacacctatgacatgcgctacatggacagtccagtaaaggtgcacttggac
cacgtttctgcagtcctggatgttgattattcccctaccggaaaggaatttgtatctgcc
agctttgataaatccattcgcatgttttcggttgaaagcggccacagcagggaagtgtat
cacacaaagaggatgcagcatgtaacctgtgtcagatggtcagcggacaacaaatacatt
ctgtgcggttccgatgaaatgaacattcgcatatggaaagccaatgcttcagaaaaactt
ggcctgctgacgccacgtgagaaggccgctcagaactacaaccagaagctaaaggaaaaa
ttccagcatcacccacaaatcaagagaatttcaaggcacagacacctccccaaatctata
tacagccagataaaggagcaacgcgttatgaaggaagctcgtcgcaagaaggatgtgaat
cgtcgcaaacacagcaaagcgggcacagtgccaattttatcagagaagcagaagcctgtg
gtggccgtggtggactaa
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