Rana temporaria (common frog): 120941496
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Entry
120941496 CDS
T07929
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120941496 (SNTB1)
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Gene cluster
GFIT
Motif
Pfam:
PH_17
PDZ
PH
PDZ_6
PDZ_2
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
120941496
NCBI-ProteinID:
XP_040210845
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All DBs
Position
5:389852851..390101193
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AA seq
496 aa
AA seq
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MAVVEGGGGVEVLLRDGWYKVWGKLSEVSLVLSADRSGDNNGVSNGSFRGDPQHPEPAVP
EAAIANQKRAVRVVKSEPGGLGISIKGGRENKMPVLISKIFRGLAADLTHSLYVGDAILS
VNGTDLRDATHDQAVQVLKRAGREVTLEVKYMREATPYVKKGSPVSEIGWETPPPESPRL
GISSTCPPSPLSSPVLGDRKTIPLKMCFVTRSMTVPDPENRHLELHSPDAKHTVVLRAKD
PAAAQTWFNTIHGTVTELLPKVTAEVQSQLGKNGISGSHEIRHMGWLAEKIPGENEKQWK
QVLLVVTEKDLLMYDSMPRMKEAWYSPVHTYPLIATRLVHSGPGKGLSLFGTEFSFATRT
GSRQGIETHLFRVETSRDLSLWTRQIVQGCHNSAERIKEITTPCTYKNQDCRLVINYEHG
FSIAAQAPDGTFTDILEQYSYEKLKMSSDDGIKMLFLDFGGKDGDVQLDLQCCPKPIVFI
IHSFLSAKITRLGLVA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtagaaggtggcggtggggtggaggtgttgctccgggacggttggtataaa
gtttgggggaagttgtcggaggtgtccctggtgctgagcgcggaccgctccggggataac
aacggggtcagcaatggatcgttccggggagacccccaacacccggagcccgccgtaccg
gaggcggcgatcgccaatcagaagcgggcggtgcgggtggtgaagtcggagccgggcggg
ctcgggatcagtataaagggaggacgggagaataagatgccggtcctcatctctaagatc
ttccggggactggccgccgatctcacccactccctgtatgtgggggacgccatcctctcc
gtcaacgggaccgacctccgggacgccacccatgaccaggccgtccaggtactgaagagg
gcgggccgggaggtcaccctggaggtaaagtacatgcgggaggccacgccttatgtgaag
aaaggatcccctgtatcagaaatcggctgggaaactcctccaccggaatcgccgcgattg
ggaatttcatccacctgtccgccatcacctttatcatcgcctgtactaggagacagaaag
accatcccactcaagatgtgctttgttacaagaagcatgacagtccctgacccagagaac
agacatctagaactgcattcacctgatgccaagcataccgtggtgctgcgagcaaaagat
cccgcggcggcccagacctggttcaataccattcatggaacggtgacggaacttctcccc
aaggtgaccgccgaagtccaaagtcagctgggaaaaaacggaatctcgggaagtcatgaa
attcggcacatgggctggctggcagaaaagatcccgggagagaatgaaaagcagtggaag
caagttttactggttgtcacagaaaaggacctcctgatgtatgacagtatgcctcgtatg
aaggaggcctggtacagtcctgtgcacacctaccctctcatagctaccaggctagtccac
tccggaccagggaaagggttgtctctgtttggtacggagttttcctttgcaacgcgtacc
ggctccaggcaagggatcgagacccacctgttcagagtggagaccagccgagacctctca
ctgtggaccagacaaattgtacagggctgccataactctgccgagcgcatcaaagagatc
accactccttgtacttacaagaaccaagactgccgattggtgatcaattacgagcatgga
ttctctatcgccgcgcaggctcccgatggtactttcaccgatatcttagaacaatactcg
tatgaaaagctaaaaatgtcctcagatgacggaatcaaaatgctatttttagactttggc
ggcaaggatggagacgttcagttggatctccagtgttgcccgaaacccattgtattcatc
atccattccttcctctctgccaagatcacacgacttgggctggtggcatga
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