Rana temporaria (common frog): 120941499
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Entry
120941499 CDS
T07929
Symbol
COL14A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rtem00535
]
120941499 (COL14A1)
Proteoglycans [BR:
rtem00535
]
Extracellular matrix (ECM) proteoglycans
Others
120941499 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
vWA_SIBA-E
VWA_3
Fn3_VIN3
Copine
Motif
Other DBs
NCBI-GeneID:
120941499
NCBI-ProteinID:
XP_040210848
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All DBs
Position
5:complement(390357132..390649507)
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AA seq
1855 aa
AA seq
DB search
MKGQHNLHTMIVLSLLAVTVFLSNLGESQVTPPTKLRFHVVSQDSVHISWKATKDKIRGY
KLLVTPKSGGKTNQLNLKNNATRAIIQRLDPDRSYKVQIVAFNEDDDSKPVLGEFRIRDL
EKKRKTKKIETSESENQVMEEDSKFSCKSPANADIVILVDGSWSIGRVNFRLVRSFIENL
VGAFNVATDKTRIGLAQYSGDPRIEWDLNTYDTKDSVLDAVRNLPYKGGNTLTGLALTFI
LENSFKTEAGARSDLPKIGILITDGKSQDDVIPPAKSLKDAGIELFAIGVKNADLNELKE
IASEPHTDHVYNVADFNIMDSIVGSLTKTVCERVEDIDINIKGEVAEVIGSPSDLVTSEV
TARSFRVSWSHAPGNVEKYRAVYYPTKGGQPEEVIVDGSVSTTVLKNLMSLTEYQIAVFA
VYARSSADGLRGSETTLALPMATDLDLYDVTHRSMRAKWGGVAGASGYMILYAPLTEGLT
DEKEMKVPASITDVELDELTPSTEYTVTVYAMFGEEASDPLTAQETTLPLTPPRDLRFSN
IXHSSATVSWDHSHRXVNGYRIMYVKTGDSDINNVEVGRVSSYNLKKLASLTEYTVAIFS
VFDEGQSEPLTGTFTTKPVPSPRDLKVRDITSQSFVAYWTNFAPDITMYRLQWTPRRGGT
TKRLILLYICFVXAIIKGNVNSHLIDRLTHSTEYEVSLSAILXDESESDTLSALATSLMR
TTQAPTTAKTDNTVRFGIRNLKIDDETTSSLHVSWLMNDANIRQYIVSYITAYGDREEQR
VIAGRENDIVLPSLLSDTEYKVTVTPVYFSGEGNPVSASGRTLPLSAPRNLRVSDEWYNK
LRITWDSPPSPTMGYRIVYRPTSGTGPALETFVGDDVNTILILNLLSGTEYNLKVLASYS
TGFSDALTGVGKTLYLGVTNLSAYQVKMTSICSQWQLHRHATSYRIIIESLQDGSKQEAV
LASGTARHCFYELMPNSRYRITLYAQIQEAEGPGVSIVETTLPVATAAPTRPPTPAPTIP
AAREVCKSARADLVFLVDGSWSIGDDNFHKVTRFLYNTAGAMADIGPEGTQVGVAQYSDD
ARTEFKLNSHKTKASLLAAINAISYKGGNTKTGRAIKHVREDLFTVESGMRKGVPRVLVV
ITDGRSQDETITFASQMHLEGFSIFAIGVADADYNELVNIGSKPSERHVFFVDDFDMFKK
IEDELVTFICETASATCPWAHIQGSSVSGFKMMEMFGLVQKEYATLDGVSMEPGTFNNFP
CYRIHKDALVSQPTKHIHPEGLPSDYTISFLFRILPDTPKEPFALWEILNKDYEPLVGVI
LDNNGKTLTYFNYDNKAQFQTITFEGPEVKKIFHGSFHKIHIIVTKTNAKLIVDCKHVGE
KPINTAGNITVDGLEVLGRMVRSRGPKDNSAPFQLQMFDIVCTSTWANRDKCCELPALRD
EATCPPLPNTCNCEQENKGLPGPPGPPGGGGMRGQKGPNGEKGQPGSDGPPGPSGPPGVQ
GQPGPQGPSGHSIQGPPGSPGSKGDKGEAGMQGNQGVPGTTGSPGMEGPAGQRGVPGKDG
STGPSGPPGPMGAPGNPGSPGSPGGTGRQGDSGPQGSPGVKGERGERGDTQSQNMVRAIA
RQVCEQIIQSHMARFNSLLNQVPSQSVSVRSIPGPPGQPGTQGPQGPPGEQGSSGRPGFP
GSPGSPGTPGDRGLTGEKGERGNSGIGTQGPRGPPGPPGSPGEGRTGSQGPVGVPGQRGI
PGPPGNTGSMGPPGPQGYCDASSCAGYGGYGGQPDQGSPESYGPASPYDDDDDDEEPDPY
GQYHNAYPESYGHGGYVQPEFTPVEEEDSTEVRSPGISRMSRSIGKRSSKSLEQA
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atgaagggacaacacaacctacacaccatgatcgttctgtcactattagcggtcacagtt
tttttatccaatctgggggagagtcaagtgacgccgcctacaaaactacgattccatgtt
gtgtcacaagacagtgtgcatatttcatggaaagcaaccaaagataaaattagaggatat
aaactccttgtgacaccaaaatcaggtgggaaaaccaaccaactaaaccttaaaaacaat
gccaccagagctatcattcaaagacttgatcctgatcggagttacaaagtacagatcgtt
gcctttaatgaagacgatgacagcaagcccgtccttggagagtttagaattcgagatttg
gaaaagaagagaaaaacgaaaaaaattgaaacatcagaaagtgagaaccaagtcatggag
gaagactcaaagttttcatgtaagtccccagccaatgcagatattgtaatcctggtcgat
ggatcctggagtattggaagagttaattttagacttgtgagaagcttcatagagaatttg
gttggagcttttaatgttgctacagataaaacaagaataggtttggcacagtacagtggt
gaccccagaatagaatgggatctaaatacatatgacaccaaggattccgtacttgatgct
gtccgaaacctgccttacaagggtggaaacacgcttacaggtcttgccttgacattcatt
ctggaaaacagttttaagacagaagcaggagccagatcggatcttccaaagattgggatc
ttgattacagatggaaaatcacaagatgatgttatcccacctgccaaaagtctgaaggat
gctgggattgaactttttgctattggtgtgaaaaacgctgaccttaatgaattgaaggag
attgcctcagaaccacacaccgaccatgtttacaatgtagctgacttcaacatcatggac
tccattgttggatcacttacaaaaaccgtgtgcgagagagtggaagatatcgacattaat
attaaaggggaggtagctgaagtgattggatctccctctgacttggtcacatcggaagta
acggccagaagtttccgggttagctggtctcatgcaccaggaaatgtggaaaaatacaga
gcggtctattaccccaccaaaggaggacaaccagaagaggtgatagtggatggcagtgtg
tctactacagtgctgaagaacctaatgtctctaacagaataccagatagccgtgtttgct
gtttacgccaggtcttcagctgatggattgagaggctccgaaaccaccttggcattacca
atggccaccgatcttgatttgtatgatgtcacccaccgaagcatgagagcaaaatggggc
ggagttgcaggagcttctggttatatgatcctgtatgcacctcttactgagggattaaca
gatgagaaagagatgaaggttcctgcatccattactgatgttgagctggatgaactgact
cccagtacagaatacacagtgacagtctacgcaatgtttggagaagaggccagtgatccg
ctcacagcacaggaaacaacattgccgttaacacctcccagagacctccgattttcaaac
attngacacagctcagccaccgtctcctgggaccactcgcacaganatgtaaatggttac
cggattatgtacgtgaaaacgggcgattcagacatcaacaatgtggaagttggtcgagtt
tcatcctacaatttaaagaaactggcatcgctcacagagtacacggtggccatcttctct
gtttttgatgaaggacaatctgagcccctcacaggcacttttactacaaagccggtgcca
tctcctcgtgatctgaaagtcagggatattacctctcaaagttttgtggcttattggaca
aattttgcaccagatataactatgtacagactacagtggacaccccggagaggcggcacc
accaagagacttatactactttatatttgttttgtctaggctataattaaagggaacgtc
aactcccatcttattgaccgcttgacgcatagcacagagtatgaagtctctctatcagcc
atattgnaggatgaatcggaaagtgataccctgtcagccttggctacatcattgatgcgg
accactcaggctccaactacagccaagaccgacaacactgtccgatttgggatcagaaac
ctcaaaatagatgatgaaacaacatctagtcttcacgtatcttggcttatgaatgatgct
aacattcgtcagtacatcgtgtcctacatcactgcttatggagatcgtgaagaacagaga
gtcatagctggtcgagaaaacgacattgtcctgccatccttactgtctgacaccgagtac
aaagtcactgtgactcctgtgtacttcagtggagaagggaaccctgtgtctgcctctgga
agaacactgccactctctgctccaaggaacctgagagtttctgatgaatggtataacaaa
ctgaggataacatgggactctcctccttcaccaaccatgggctacaggatagtgtacagg
cctacaagtggaacgggtccggctctggagacgtttgtgggcgatgatgtgaacaccata
ttgattcttaatcttctcagtgggacagaatacaatcttaaggttctagcatcatattcc
accggattcagtgatgcattgactggagtgggcaaaacattatatctcggagtgacaaat
ctgagtgcttatcaagttaagatgaccagtatctgttcccaatggcagcttcacagacat
gcaacctcatacaggatcatcatcgagtcactgcaggatggctccaagcaagaagctgtc
ctggctagtggaacagctcgtcactgtttctatgaacttatgcccaactccagatacagg
atcactctctatgcacagatacaggaggctgaaggacccggtgtcagcattgtggaaaca
acactgccagttgcaacagcagcaccgaccagacctccaactcctgcaccaactattcct
gcagcccgagaagtgtgtaagtctgccagagcagacctcgtattcctggtggatggatcc
tggagtatcggagatgacaactttcacaaagtcacccgcttcctgtacaacacagctgga
gccatggctgacatcggccctgaggggacacaggttggtgtcgctcagtacagtgatgat
gcaaggacagaatttaagctgaactcgcataaaactaaagcgtctcttctggctgccata
aatgccatatcttacaaaggcgggaacacaaaaacaggaagagcaattaagcacgtccgt
gaagatttgtttactgtggaatctggcatgagaaagggtgtgcccagggttttggtggtg
attaccgatgggcgctctcaagatgaaactataacgtttgccagccagatgcacttggaa
ggcttcagcatttttgcgattggcgtggcggatgcagactacaacgagttagtgaacatt
ggcagcaagcccagcgagagacacgtcttcttcgtcgatgactttgacatgttcaagaaa
atagaagatgagctggtcacttttatttgcgagacggcgtcagcaacttgtccatgggcc
cacatccaaggcagcagtgtatcaggttttaaaatgatggaaatgtttgggttggtgcaa
aaggaatatgccaccttggatggagtctccatggagcctggaacttttaataactttcca
tgctacagaatacacaaagacgctctggtgtcccagcccaccaaacatatccatccagag
ggcctcccttcagattataccatatccttccttttccgaatacttcccgatacaccgaag
gaaccatttgcactgtgggaaatcttaaacaaagactacgagccgttggttggcgtaata
cttgacaataacggtaaaacactaacttatttcaattatgacaataaggcacagtttcag
actattacctttgaaggacccgaggtcaaaaaaatattccatggcagctttcataagata
catattatagttaccaagactaatgctaagctaatcgtcgactgcaaacatgttggggaa
aagccaataaacactgccggaaatatcacagtagatggtctagaagtcctaggccggatg
gtgagatcccgaggacccaaagacaattctgctccattccagctgcagatgtttgacatt
gtgtgtacatcaacctgggccaaccgtgacaagtgctgcgaacttccggcattgagagat
gaagccacctgtcctcctcttccaaatacctgcaactgcgagcaggagaacaaaggatta
ccggggcccccaggacctccgggtggtggtggtatgaggggacaaaaaggaccaaatgga
gaaaaagggcaaccgggctcagacggcccgccaggcccatcaggcccaccaggagttcag
ggacaacccggaccacagggaccaagtggacattccattcagggaccacctggttctcct
ggttcaaagggagataaaggagaagctggaatgcaaggaaatcagggagttcctggcaca
acagggtctcctggaatggaaggacctgcgggacaaaggggagtgccaggaaaagatggc
tcgactggaccatccggaccccctgggccaatgggtgcaccaggtaatccgggatctcca
ggctctccaggaggcacaggacgtcagggtgatagcggaccacagggttctcctggtgta
aaaggagaaagaggagaaagaggagacacccagtcacagaacatggtgcgtgcaatcgct
cgccaagtgtgtgaacaaatcatacagagtcatatggccaggtttaattcactcctgaac
caagtaccaagtcagtctgtatcagtcagaagtatccctggtcccccaggacagccaggt
acgcaaggcccacaaggtccccctggagaacaaggatcttctggaagaccaggattccct
ggcagccctggctcaccaggaacacctggagatagaggtttaactggtgaaaagggagag
agaggaaactctggaataggaacacaaggacccaggggtcccccagggcctccaggatcc
ccaggtgaaggtcgtactggaagccaaggtccagttggggttccaggccagcgtggtatc
ccaggtcctccaggaaatactggctctatggggcctcctggtcctcaaggttattgtgac
gcgtcctcgtgtgctggatatggtggctatgggggacaaccagatcaaggttctcctgaa
tcctatggcccggcaagcccttatgacgatgatgatgatgacgaagaaccagatccctat
ggacaataccataacgcctaccctgagtcctatggacatggtggttacgtccaaccagag
ttcaccccagtagaggaggaggactctacggaggtgaggtcacctggaatcagtcgtatg
tcccgtagcattggaaaaagatcatccaagtctctggaacaagcttaa
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integrated database retrieval system
