Rana temporaria (common frog): 120941531
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Entry
120941531 CDS
T07929
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120941531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120941531
03016 Transfer RNA biogenesis [BR:
rtem03016
]
120941531
03012 Translation factors [BR:
rtem03012
]
120941531
04131 Membrane trafficking [BR:
rtem04131
]
120941531
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtem04147
]
120941531
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120941531
Transfer RNA biogenesis [BR:
rtem03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120941531
Translation factors [BR:
rtem03012
]
Eukaryotic type
Elongation factors
120941531
Membrane trafficking [BR:
rtem04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
120941531
Exosome [BR:
rtem04147
]
Exosomal proteins
Proteins found in most exosomes
120941531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Ras
Motif
Other DBs
NCBI-GeneID:
120941531
NCBI-ProteinID:
XP_040210908
LinkDB
All DBs
Position
5:397816064..397829350
Genome browser
AA seq
457 aa
AA seq
DB search
MSDKGKTHLNIVIIGHVDSGKSTTTGHLIYKCGGFDPRSLEKLEAAAGQIGKSSFKFAWI
LDKLKVERERGITIDISLWKFQTNRYTITIIDAPGHRDFIKNMITGTSQADVAVLVVSAA
TGEFEAGVSRNGQTREHALLAYTMGVKQLIVCVNKMDMTDPPYSQKRFDEVVKNVTIYLK
KIGYNPATIPFIPVSGWTGENISAPSQKMVWFKGWKVKRKDTFSKGQSLLEVIDCLVPPV
RPANKPLRLPLQDVYKIGGIGTVPVGKIETGILKPGMTISFAPSNFTAEVKSIEMHHQPL
ETAFPGYNIGFNVKNIAVKSLKRGNVAGNSKSDPPTEATSFIAQVIILNHPGFIKAGYSP
VIDCHTSHTTCQFSELQVKIDRRSGKKLEDDPATLKSGDAAIVKLKPIKPFCVERFYDYP
PLGRFAARDLKQTVAVGVVKSVERKARRQAQKPIPVN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagggaaagacccatctgaacattgtcattattggccatgtagactctggg
aaatccaccaccactggtcatctcatctacaagtgtggtgggtttgatcccagatccctg
gagaagctggaagctgctgccggccagatcggcaagagctcgttcaagtttgcatggatc
ctggataagctgaaggtggagagggagcgtggaatcaccatcgatatctccctttggaaa
ttccaaaccaacagatatacgatcaccatcattgatgctcctggacacagggacttcatt
aaaaatatgatcactggcacatcccaggctgatgtggctgtgctggtggtttctgccgca
acaggtgagtttgaagctggggtttccaggaatgggcaaaccagagaacacgctttgctg
gcctacaccatgggtgttaaacagctcatcgtctgcgtgaacaagatggacatgaccgac
ccaccgtacagccaaaagaggtttgatgaagtagtcaagaacgtgactatctacctaaag
aagattggctacaacccagctaccattccatttatccctgtgtctgggtggactggagag
aacatatctgctcccagtcagaagatggtctggtttaaaggctggaaggtgaaacgaaaa
gataccttttcaaaaggccaatctctacttgaggtcattgactgccttgttcccccagtg
cgtccagccaacaagccacttcgcttacccctacaggatgtctataaaataggaggcatt
ggtacagttcctgtaggtaaaatcgagactgggattctgaagccagggatgaccatctcc
tttgcaccctcaaacttcactgcagaagtaaaatctattgagatgcaccatcagcctctg
gagacggccttccctgggtacaacattggcttcaatgtgaagaatattgctgtgaagagt
ctgaaacgtggaaatgttgctgggaactcaaagagtgacccacctaccgaggccaccagc
ttcatagcacaggtgattattctcaaccatcctggttttattaaagctggctactcccca
gtcatagactgccacacaagccacacgacctgccagttttccgagttgcaggtgaagatt
gatcgtagatcaggcaaaaaactggaagatgacccagcaacgctgaaatcgggagatgct
gcaattgtcaagctgaagcctatcaaaccattctgtgtggagagattttatgactatcct
ccactagggagatttgcagctcgggacttgaagcaaaccgttgctgtgggggttgtgaaa
tcggtggaaagaaaagcgagaagacaggcccagaaacccatcccagtcaactga
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