Rana temporaria (common frog): 120941583
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Entry
120941583 CDS
T07929
Symbol
PUF60
Name
(RefSeq) poly(U)-binding-splicing factor PUF60 isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120941583 (PUF60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtem03041
]
120941583 (PUF60)
Spliceosome [BR:
rtem03041
]
Complex A
U2 snRNP components
U2 related factors
120941583 (PUF60)
Complex B
120941583 (PUF60)
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GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
120941583
NCBI-ProteinID:
XP_040211013
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Position
5:complement(412748796..412818306)
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AA seq
598 aa
AA seq
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MATAIMLGVDSIKLENGQSTSSKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAH
QHQQLTNLQMAAVTMSFGDPLSPLQSMCLDYVSGTTLTLPCPQPLPLRTGLLWNWASANL
PLITEMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKG
FAFVEYEVPEAAQLALEQMNSVMLGGRNIKVSANKCKSVPEASQHAPEQMNSVMGGRIIK
VGRPSNIGQAQPIIDQLAEEARSFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCMLARDP
TTGKHKGYGFIEYDKSQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPA
AAVAAAAATAKITAQEAVAGAAVLGTLASPGLVSPALTLAQPLGALPQAVMAAQAPGVIT
GVTPVRPPLPVTIPQVGLVNPILSSPPAVTQLEVKKEKEEEEPVLESERPEMLSEQEHMS
ISGSSARHMVMQKLMRKQESTVMVLRNMVDPRDIDDDLEGEVTEECGKFGAVNRVIIYQE
KQGEEEDAEIIVKIFVEFSMASETHKAIQALNGRWFAGRKVVAEVYDQERFNNSDLSA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcaatcatgttgggtgttgactccatcaagctagaaaatggacagagcact
tcgtccaagctgggtcttccccctctcaccccggagcagcaggaggctttacagaaggcc
aagaaatatgcaatggaacaaagcatcaagagtgtcctagtaaaacaaactattgctcac
cagcaccagcagctcaccaacctccagatggcagcagtgacaatgagctttggagatcct
ctctcacctttacaatcgatgtgcctggactacgtgtcaggtacaacccttacgctgcca
tgtccccagcctttacctttgcgcacaggtttattatggaattgggcttcagccaactta
cctctgataacagaaatggcagctcaaaggcagcgggctctcgcaataatgtgtcgtgtt
tatgtcggatccatctattatgaacttggagaagacaccattcggcaagcatttgcaccg
tttggaccaataaaaagcatagacatgtcatgggactctgtgaccatgaaacacaagggg
tttgcatttgtggaatatgaagtcccagaagctgctcagctcgccctggaacagatgaac
tccgtcatgctgggcggaaggaatatcaaggtgagcgcaaataagtgtaaatctgtacct
gaagcttctcagcacgccccggaacagatgaactccgtcatgggtggaaggattatcaag
gttggcagaccaagcaacattggccaagcacagcccatcattgaccaattggcggaggaa
gcccgctccttcaacagaatctatgtggcctccgtgcaccaggatctctcagatgatgat
atcaagagtgtgtttgaggcctttgggaagatcaagtcttgtatgttggcacgggacccc
acaacaggcaaacacaaaggttacgggtttatagagtatgacaaatcccagtcttcgcag
gatgccgtctcatccatgaacttgtttgatctcggtggtcagtaccttcgagtcgggaaa
gctgttacaccaccaatgcctcttcttacacccgccaccccaggtggtctccctcctgct
gctgctgtcgctgccgctgctgcaactgccaagatcacggctcaggaagcggtggctgga
gcagctgtccttggcacactggcaagtcctggcctggtgtccccggcactaacactggca
cagcctttgggggcactaccacaagcagtcatggcagcacaagcccctggggttattaca
ggagtgacaccagtgcggccacctttaccagtgaccattcctcaggtggggctggtgaac
cccattctgtccagccccccagcagtaacccagttggaggtgaagaaagagaaggaagaa
gaggagccggttctggagtcggaaaggccagagatgctgagtgagcaggagcacatgagt
atctccgggagcagcgcacgccacatggtcatgcagaaacttatgcgaaaacaggagtcc
acggttatggtcctgcgcaatatggttgaccccagagacattgacgatgatctagaagga
gaagtgacggaggagtgcggcaagtttggcgctgtgaaccgggtgatcatttaccaggag
aagcaaggcgaggaggaagatgcggaaatcatcgttaaaatatttgtggaattctccatg
gccagcgagacgcacaaagctatccaggccctcaacggacgctggtttgcaggaaggaaa
gtagtggcagaagtatatgaccaggagaggttcaacaacagtgacctgtctgcatga
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